Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro23247 Vaccinium macrocarpon HOM05D004891 ORTHO05D005997 1.3e-293 1012.3 505 100.0
vmacro06579 Vaccinium macrocarpon HOM05D004891 ORTHO05D005997 4.7e-267 924.1 505 93.7
Rhsim03G0198300 Rhododendron simsii HOM05D004891 ORTHO05D005997 6.6e-96 355.5 513 47.4
Actinidia08623 Actinidia chinensis HOM05D004891 ORTHO05D005997 3.6e-78 296.6 510 41.4
Actinidia34190 Actinidia chinensis HOM05D004891 ORTHO05D005997 2.6e-76 290.4 503 41.0
CSS0046287 Camellia sinensis var. sinensis HOM05D004891 ORTHO05D005997 1.4e-69 268.1 510 38.2
Lj3A911G21 Lonicera japonica HOM05D004891 ORTHO05D005997 5.3e-69 266.2 510 39.6
Dinv28341 Davidia involucrata HOM05D004891 ORTHO05D005997 2.6e-68 263.8 513 39.0
Sabra12G0021600 Salix brachista HOM05D004891 ORTHO05D005997 7.6e-68 262.3 516 38.4
TAR375G0232 Trochodendron aralioides HOM05D004891 ORTHO05D005997 3.9e-64 250.0 513 36.6
Sabra15G0017200 Salix brachista HOM05D004891 ORTHO05D005997 4.3e-63 246.5 499 39.5
Haze_00106 Corylus avellana HOM05D004891 ORTHO05D005997 5.7e-63 246.1 512 36.7
Hma1.2p1_0327F.1_g126710 Hydrangea macrophylla HOM05D004891 ORTHO05D005997 9.6e-63 245.4 511 37.6
Nitab4.5_0000473g0100 Nicotiana tabacum HOM05D004891 ORTHO05D005997 8.2e-62 242.3 506 36.2
Cfa016358 Carpinus fangiana HOM05D004891 ORTHO05D005997 1.5e-60 238.0 511 35.4
QL09p011070 Quercus lobata HOM05D004891 ORTHO05D005997 2.0e-60 237.7 510 36.5
Potri.015G022900 Populus trichocarpa HOM05D004891 ORTHO05D005997 1.0e-59 235.3 509 37.1
Cc02_g01930 Coffea canephora HOM05D004891 ORTHO05D005997 1.7e-59 234.6 512 35.7
FAN06G0473 Fragaria x ananassa HOM05D004891 ORTHO05D005997 8.5e-59 232.3 514 35.6
Potri.012G032200 Populus trichocarpa HOM05D004891 ORTHO05D005997 1.1e-58 231.9 514 35.8
CSS0025805 Camellia sinensis var. sinensis HOM05D004891 ORTHO05D005997 1.6e-57 228.0 170 70.0
Nitab4.5_0000472g0010 Nicotiana tabacum HOM05D004891 ORTHO05D005997 1.6e-57 228.0 506 35.0
GSVIVG01028731001 Vitis vinifera HOM05D004891 ORTHO05D005997 2.1e-57 227.6 510 35.3
Ciclev10005604m.g Citrus clementina HOM05D004891 ORTHO05D005997 1.0e-56 225.3 511 34.8
MD07G1284300 Malus domestica HOM05D004891 ORTHO05D005997 2.3e-56 224.2 506 35.4
PSO170G4664 Papaver somniferum HOM05D004891 ORTHO05D005997 3.9e-56 223.4 513 35.1
Thecc.03G192100 Theobroma cacao HOM05D004891 ORTHO05D005997 8.7e-56 222.2 511 35.2
Nn7g37380 Nelumbo nucifera HOM05D004891 ORTHO05D005997 1.1e-55 221.9 512 34.6
COL.COLO4_35665 Corchorus olitorius HOM05D004891 ORTHO05D005997 1.9e-55 221.1 508 34.6
FAN03G3090 Fragaria x ananassa HOM05D004891 ORTHO05D005997 1.9e-55 221.1 511 35.0
Manes.14G018900 Manihot esculenta HOM05D004891 ORTHO05D005997 3.3e-55 220.3 510 35.5
Duzib084G0775 Durio zibethinus HOM05D004891 ORTHO05D005997 4.3e-55 219.9 510 34.3
MSTRG.8493 Avicennia marina HOM05D004891 ORTHO05D005997 7.4e-55 219.2 510 33.9
FAN06G4508 Fragaria x ananassa HOM05D004891 ORTHO05D005997 9.7e-55 218.8 514 33.9
Gorai.008G271100 Gossypium raimondii HOM05D004891 ORTHO05D005997 9.7e-55 218.8 510 33.7
CAN.G108.22 Capsicum annuum HOM05D004891 ORTHO05D005997 1.3e-54 218.4 506 34.4
Gohir.A12G252100 Gossypium hirsutum HOM05D004891 ORTHO05D005997 1.3e-54 218.4 510 34.1
Gohir.D12G253400 Gossypium hirsutum HOM05D004891 ORTHO05D005997 1.3e-54 218.4 510 33.7
Cpa.g.sc3.45 Carica papaya HOM05D004891 ORTHO05D005997 2.8e-54 217.2 510 33.9
FAN10G2020 Fragaria x ananassa HOM05D004891 ORTHO05D005997 2.8e-54 217.2 510 33.1
FAN10G2063 Fragaria x ananassa HOM05D004891 ORTHO05D005997 2.8e-54 217.2 510 33.1
CiPaw.05G258300 Carya illinoinensis HOM05D004891 ORTHO05D005997 4.8e-54 216.5 511 33.9
FvH4_7g30940 Fragaria vesca HOM05D004891 ORTHO05D005997 6.3e-54 216.1 514 33.7
PSO063G3645 Papaver somniferum HOM05D004891 ORTHO05D005997 1.1e-53 215.3 510 34.1
Lalb_Chr01g0014881 Lupinus albus HOM05D004891 ORTHO05D005997 3.1e-53 213.8 511 34.4
SalBow2G0402 Salvia bowleyana HOM05D004891 ORTHO05D005997 4.1e-53 213.4 504 34.1
RcHm_v2.0_Chr1g0380031 Rosa chinensis HOM05D004891 ORTHO05D005997 5.3e-53 213.0 511 33.7
MBI06_g22405_MAGBIO Magnolia biondii HOM05D004891 ORTHO05D005997 1.2e-52 211.8 510 32.5
Oeu037109.1 Olea europaea HOM05D004891 ORTHO05D005997 1.2e-52 211.8 515 34.0
CiPaw.06G007100 Carya illinoinensis HOM05D004891 ORTHO05D005997 1.5e-52 211.5 506 34.8
FAN01G2480 Fragaria x ananassa HOM05D004891 ORTHO05D005997 2.0e-52 211.1 511 33.3
Prupe.2G306500 Prunus persica HOM05D004891 ORTHO05D005997 2.0e-52 211.1 507 33.9
PGSC0003DMG400009098 Solanum tuberosum HOM05D004891 ORTHO05D005997 5.9e-52 209.5 504 33.9
Actinidia34193 Actinidia chinensis HOM05D004891 ORTHO05D005997 7.7e-52 209.1 503 34.8
SGA_v2.0_scaffold10G05259 Striga asiatica HOM05D004891 ORTHO05D005997 7.7e-52 209.1 504 34.5
arahy.Tifrunner.gnm1.ann1.6V5JG4 Arachis hypogaea HOM05D004891 ORTHO05D005997 1.3e-51 208.4 509 34.2
Sopen03g003400 Solanum pennellii HOM05D004891 ORTHO05D005997 2.9e-51 207.2 506 33.6
Sopen03g003460 Solanum pennellii HOM05D004891 ORTHO05D005997 3.8e-51 206.8 506 33.0
arahy.Tifrunner.gnm1.ann1.PB2THD Arachis hypogaea HOM05D004891 ORTHO05D005997 8.5e-51 205.7 510 34.1
TWI14G0964 Tripterygium wilfordii HOM05D004891 ORTHO05D005997 1.1e-50 205.3 512 34.0
MD01G1214600 Malus domestica HOM05D004891 ORTHO05D005997 1.4e-50 204.9 506 33.4
Manes.06G156500 Manihot esculenta HOM05D004891 ORTHO05D005997 1.9e-50 204.5 510 33.5
Oeu024464.1 Olea europaea HOM05D004891 ORTHO05D005997 2.5e-50 204.1 510 32.5
Glyma.13G040300 Glycine max HOM05D004891 ORTHO05D005997 3.6e-49 200.3 514 31.7
TWI23G0467 Tripterygium wilfordii HOM05D004891 ORTHO05D005997 4.6e-49 199.9 504 32.1
Glyma.14G123700 Glycine max HOM05D004891 ORTHO05D005997 1.0e-48 198.7 505 32.1
Phvul.008G159100 Phaseolus vulgaris HOM05D004891 ORTHO05D005997 1.8e-48 198.0 505 32.7
Lj1g0012174 Lotus japonicus HOM05D004891 ORTHO05D005997 5.1e-48 196.4 513 32.9
HanXRQChr14g0462811 Helianthus annuus HOM05D004891 ORTHO05D005997 1.5e-47 194.9 505 33.3
TPR.G33305 Trifolium pratense HOM05D004891 ORTHO05D005997 2.6e-47 194.1 505 32.9
PGR142G0227 Punica granatum HOM05D004891 ORTHO05D005997 4.4e-47 193.4 507 32.3
Psat6g039240 Pisum sativum HOM05D004891 ORTHO05D005997 9.7e-47 192.2 462 34.8
Actinidia03156 Actinidia chinensis HOM05D004891 ORTHO05D005997 1.3e-46 191.8 507 32.7
Migut.F01055 Erythranthe guttata HOM05D004891 ORTHO05D005997 2.2e-46 191.0 506 32.0
CANSAT21G1757 Cannabis sativa HOM05D004891 ORTHO05D005997 2.8e-46 190.7 507 32.9
VMungo0647G1360 Vigna mungo HOM05D004891 ORTHO05D005997 3.7e-46 190.3 502 32.7
Aqoxy5G04112 Aquilegia oxysepala HOM05D004891 ORTHO05D005997 8.2e-46 189.1 509 32.0
ClCG05G008660 Citrullus lanatus HOM05D004891 ORTHO05D005997 1.8e-45 188.0 510 31.8
Medtr1g028580 Medicago truncatula HOM05D004891 ORTHO05D005997 2.4e-45 187.6 507 32.0
MELO3C006974.2 Cucumis melo HOM05D004891 ORTHO05D005997 1.2e-44 185.3 506 32.0
CsaV3_3G021850 Cucumis sativus L. HOM05D004891 ORTHO05D005997 1.5e-44 184.9 510 31.6
THA.LOC104825132 Tarenaya hassleriana HOM05D004891 ORTHO05D005997 1.5e-44 184.9 509 31.4
AL8G27930 Arabidopsis lyrata HOM05D004891 ORTHO05D005997 6.5e-43 179.5 511 31.1
Carub.0008s1346 Capsella rubella HOM05D004891 ORTHO05D005997 5.5e-42 176.4 512 30.5
Sp6g15430 Schrenkiella parvula HOM05D004891 ORTHO05D005997 9.4e-42 175.6 511 30.3
ECA238G3691 Erigeron canadensis HOM05D004891 ORTHO05D005997 1.6e-41 174.9 508 31.7
AT5G53280 Arabidopsis thaliana HOM05D004891 ORTHO05D005997 2.1e-41 174.5 511 30.3
EL10Ac3g05352 Beta vulgaris HOM05D004891 ORTHO05D005997 2.1e-41 174.5 507 30.2
Thhalv10014380m.g Eutrema salsugineum HOM05D004891 ORTHO05D005997 2.7e-41 174.1 509 30.1
MSTRG.23354 Avicennia marina HOM05D004891 ORTHO05D005997 1.8e-40 171.4 175 56.6
AUR62031485 Chenopodium quinoa HOM05D004891 ORTHO05D005997 3.0e-40 170.6 514 29.8
unitig_90.g27528 Utricularia gibba HOM05D004891 ORTHO05D005997 6.7e-40 169.5 171 53.8
CARHR266320 Cardamine hirsuta HOM05D004891 ORTHO05D005997 8.8e-40 169.1 511 29.9
BcaB08g35688 Brassica carinata HOM05D004891 ORTHO05D005997 1.1e-39 168.7 505 29.1
Eucgr.K00322 Eucalyptus grandis HOM05D004891 ORTHO05D005997 1.5e-39 168.3 503 31.4
A03p15250 Brassica napus HOM05D004891 ORTHO05D005997 2.0e-39 167.9 502 30.1
Sc19g0001110 Simmondsia chinensis HOM05D004891 ORTHO05D005997 2.8e-38 164.1 507 30.2
Aa31LG3G9250 Aethionema arabicum HOM05D004891 ORTHO05D005997 4.8e-38 163.3 506 29.6
Hund11687 Selenicereus undatus HOM05D004891 ORTHO05D005997 6.3e-38 162.9 504 30.0
Ah.07g206050 Amaranthus hybridus HOM05D004891 ORTHO05D005997 8.2e-38 162.5 505 29.3
BcaB01g04239 Brassica carinata HOM05D004891 ORTHO05D005997 1.8e-37 161.4 502 28.9
Dinv35303 Davidia involucrata HOM05D004891 ORTHO05D005997 2.4e-37 161.0 414 33.8
BraA03t10818Z Brassica rapa HOM05D004891 ORTHO05D005997 3.1e-37 160.6 502 29.7
Lsat_1_v5_gn_2_134260 Lactuca sativa HOM05D004891 ORTHO05D005997 3.1e-37 160.6 508 31.7
DCAR_014529 Daucus carota HOM05D004891 ORTHO05D005997 9.1e-37 159.1 175 52.0
AUR62021048 Chenopodium quinoa HOM05D004891 ORTHO05D005997 1.2e-36 158.7 172 51.2
Hund11688 Selenicereus undatus HOM05D004891 ORTHO05D005997 1.6e-36 158.3 504 29.4
CDE10G0607 Ceratophyllum demersum HOM05D004891 ORTHO05D005997 2.6e-36 157.5 509 28.9
C03p17830 Brassica napus HOM05D004891 ORTHO05D005997 1.0e-35 155.6 502 29.1
BolC3t14190H Brassica oleracea HOM05D004891 ORTHO05D005997 1.0e-35 155.6 502 29.1
Hund04825 Selenicereus undatus HOM05D004891 ORTHO05D005997 1.7e-35 154.8 503 29.8
HPP92_024018 Vanilla planifolia HOM05D004891 ORTHO05D005997 2.9e-35 154.1 504 28.6
Sed0021890 Sechium edule HOM05D004891 ORTHO05D005997 6.5e-35 152.9 507 28.8
TAR374G1584 Trochodendron aralioides HOM05D004891 ORTHO05D005997 8.5e-35 152.5 133 62.4
Sed0007260 Sechium edule HOM05D004891 ORTHO05D005997 9.4e-34 149.1 171 50.3
Lj1C1012T12 Lonicera japonica HOM05D004891 ORTHO05D005997 1.2e-33 148.7 176 56.2
CDE10G1089 Ceratophyllum demersum HOM05D004891 ORTHO05D005997 1.6e-33 148.3 509 28.9
BcaC01g06235 Brassica carinata HOM05D004891 ORTHO05D005997 4.7e-33 146.7 479 28.6
BcaC04g20477 Brassica carinata HOM05D004891 ORTHO05D005997 1.0e-32 145.6 505 28.7
C09p43070 Brassica napus HOM05D004891 ORTHO05D005997 1.0e-32 145.6 505 28.7
BolC9t57178H Brassica oleracea HOM05D004891 ORTHO05D005997 1.0e-32 145.6 505 28.7
ATR1093G054 Amborella trichopoda HOM05D004891 ORTHO05D005997 8.8e-32 142.5 520 28.8
Ah.13g069830 Amaranthus hybridus HOM05D004891 ORTHO05D005997 7.5e-31 139.4 171 49.1
A10p10800 Brassica napus HOM05D004891 ORTHO05D005997 1.3e-30 138.7 507 28.8
Oeu036883.1 Olea europaea HOM05D004891 ORTHO05D005997 1.4e-29 135.2 251 40.6
BraA10t43162Z Brassica rapa HOM05D004891 ORTHO05D005997 5.3e-29 133.3 505 28.5
Zm00001eb203870 Zea mays HOM05D004891 ORTHO05D005997 2.0e-28 131.3 170 47.1
Atru.chr1.279 Acer truncatum HOM05D004891 ORTHO05D005997 6.5e-27 126.3 121 58.7
Os06g0506000 Oryza sativa ssp. japonica HOM05D004891 ORTHO05D005997 7.2e-26 122.9 169 45.6
Peaxi162Scf00904g00326 Petunia axillaris HOM05D004891 ORTHO05D005997 9.4e-26 122.5 119 58.0
Solyc03g007500.4 Solanum lycopersicum HOM05D004891 ORTHO05D005997 9.4e-26 122.5 121 56.2
Zm00001eb237900 Zea mays HOM05D004891 ORTHO05D005997 1.2e-25 122.1 115 59.1
Solyc03g007440.4 Solanum lycopersicum HOM05D004891 ORTHO05D005997 1.0e-24 119.0 121 55.4
AL8G27980 Arabidopsis lyrata HOM05D004891 ORTHO05D005997 1.4e-24 118.6 151 47.0
MSTRG.62 Avicennia marina HOM05D004891 ORTHO05D005997 6.8e-24 116.3 121 52.9
Oeu036884.1 Olea europaea HOM05D004891 ORTHO05D005997 1.3e-22 112.1 119 58.8
unitig_736.g22889 Utricularia gibba HOM05D004891 ORTHO05D005997 2.3e-19 101.3 118 50.8
TAR629G2914 Trochodendron aralioides HOM05D004891 ORTHO05D005997 1.0e-16 92.4 155 40.6
Os01g0224200 Oryza sativa ssp. japonica HOM05D004891 ORTHO05D005997 3.1e-13 80.9 178 36.0
Sabra10G0105200 Salix brachista HOM05D004891 ORTHO05D005997 6.6e-11 73.2 90 56.7
Sabra15G0071500 Salix brachista HOM05D004891 ORTHO05D005997 6.6e-11 73.2 90 56.7
CDE02G0860 Ceratophyllum demersum HOM05D004891 ORTHO05D005997 1.5e-10 72.0 115 44.3
Thecc.01G303500 Theobroma cacao HOM05D004891 ORTHO05D005997 7.3e-10 69.7 46 76.1
Zm00001eb338960 Zea mays HOM05D004891 ORTHO05D005997 4.7e-09 67.0 172 33.7
Sabra12G0063200 Salix brachista HOM05D004891 ORTHO05D005997 6.1e-09 66.6 90 55.6
vmacro07054 Vaccinium macrocarpon HOM05D000102 ORTHO05D426550 2.3e-08 64.7 33 84.8
MBI06_g22406_MAGBIO Magnolia biondii HOM05D004891 ORTHO05D010341 9.8e-07 59.3 180 28.9
Zm00001eb192840 Zea mays HOM05D004891 ORTHO05D005997 1.7e-06 58.5 110 37.3
TAR629G2366 Trochodendron aralioides HOM05D008545 ORTHO05D010341 3.7e-06 57.4 191 28.3


User provided reference genes

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