Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro23219 Vaccinium macrocarpon HOM05D004109 ORTHO05D005867 9.6e-300 1032.7 518 100.0
vmacro13807 Vaccinium macrocarpon HOM05D004109 ORTHO05D005867 2.5e-199 699.1 504 75.2
Rhsim07G0074000 Rhododendron simsii HOM05D004109 ORTHO05D005867 5.6e-183 644.8 479 74.1
GSVIVG01001692001 Vitis vinifera HOM05D004109 ORTHO05D005867 7.9e-169 597.8 495 66.5
CSS0030683 Camellia sinensis var. sinensis HOM05D004109 ORTHO05D005867 8.7e-168 594.3 475 68.6
Manes.06G058300 Manihot esculenta HOM05D004109 ORTHO05D005867 2.5e-167 592.8 470 68.9
FvH4_3g10270 Fragaria vesca HOM05D004109 ORTHO05D005867 7.4e-167 591.3 491 65.8
TAR369G0339 Trochodendron aralioides HOM05D004109 ORTHO05D005867 1.3e-166 590.5 484 68.0
CSS0039858 Camellia sinensis var. sinensis HOM05D004109 ORTHO05D005867 3.6e-166 589.0 484 66.3
Hma1.2p1_0892F.1_g233350 Hydrangea macrophylla HOM05D004109 ORTHO05D005867 4.8e-166 588.6 493 66.5
Prupe.4G091700 Prunus persica HOM05D004109 ORTHO05D005867 4.0e-165 585.5 504 65.7
Gohir.D13G129300 Gossypium hirsutum HOM05D004109 ORTHO05D005867 6.9e-165 584.7 486 67.5
Lj7A233T12 Lonicera japonica HOM05D004109 ORTHO05D005867 6.9e-165 584.7 476 67.2
HanXRQChr07g0201181 Helianthus annuus HOM05D004109 ORTHO05D005867 1.2e-164 583.9 485 65.4
MD10G1251700 Malus domestica HOM05D004109 ORTHO05D005867 1.2e-164 583.9 493 67.1
Cfa002071 Carpinus fangiana HOM05D004109 ORTHO05D005867 1.5e-164 583.6 487 67.8
ECA238G2995 Erigeron canadensis HOM05D004109 ORTHO05D005867 3.4e-164 582.4 473 67.0
FAN21G0038 Fragaria x ananassa HOM05D001785 ORTHO05D001933 3.4e-164 582.4 489 64.4
Gohir.A13G125500 Gossypium hirsutum HOM05D004109 ORTHO05D005867 3.4e-164 582.4 486 67.3
Potri.011G163400 Populus trichocarpa HOM05D004109 ORTHO05D005867 3.4e-164 582.4 474 67.5
RcHm_v2.0_Chr5g0016531 Rosa chinensis HOM05D004109 ORTHO05D005867 3.4e-164 582.4 481 66.7
Ciclev10015058m.g Citrus clementina HOM05D004109 ORTHO05D005867 4.5e-164 582.0 481 66.9
Gorai.013G145300 Gossypium raimondii HOM05D004109 ORTHO05D005867 4.5e-164 582.0 486 67.3
PGR083G1643 Punica granatum HOM05D004109 ORTHO05D005867 5.8e-164 581.6 474 67.3
FAN25G1737 Fragaria x ananassa HOM05D001785 ORTHO05D001933 7.6e-164 581.3 500 62.8
Lsat_1_v5_gn_2_116541 Lactuca sativa HOM05D004109 ORTHO05D005867 1.7e-163 580.1 481 65.9
Potri.001G465300 Populus trichocarpa HOM05D004109 ORTHO05D005867 1.7e-163 580.1 472 67.4
MD05G1271100 Malus domestica HOM05D004109 ORTHO05D005867 2.2e-163 579.7 474 68.8
BraA06t26000Z Brassica rapa HOM05D004109 ORTHO05D005867 3.8e-163 578.9 484 65.5
EL10Ac1g00099 Beta vulgaris HOM05D004109 ORTHO05D005867 1.1e-162 577.4 482 65.1
A06p30510 Brassica napus HOM05D004109 ORTHO05D005867 1.1e-162 577.4 474 66.7
Sabra11G0141200 Salix brachista HOM05D004109 ORTHO05D005867 1.9e-162 576.6 472 67.4
FAN11G0285 Fragaria x ananassa HOM05D001785 ORTHO05D001933 2.4e-162 576.2 500 63.4
TWI63G1440 Tripterygium wilfordii HOM05D004109 ORTHO05D005867 2.4e-162 576.2 492 64.6
CANSAT01G0468 Cannabis sativa HOM05D004109 ORTHO05D005867 3.2e-162 575.9 485 65.8
Eucgr.D00111 Eucalyptus grandis HOM05D004109 ORTHO05D005867 3.2e-162 575.9 478 66.9
BraA09t36495Z Brassica rapa HOM05D004109 ORTHO05D005867 4.2e-162 575.5 482 65.4
A09p08450 Brassica napus HOM05D004109 ORTHO05D005867 5.5e-162 575.1 482 65.4
Duzib160G0240 Durio zibethinus HOM05D004109 ORTHO05D005867 9.3e-162 574.3 496 64.1
Lj6g0008240 Lotus japonicus HOM05D004109 ORTHO05D005867 9.3e-162 574.3 515 62.7
Thhalv10004035m.g Eutrema salsugineum HOM05D004109 ORTHO05D005867 1.2e-161 573.9 481 65.7
BcaNung04636 Brassica carinata HOM05D004109 ORTHO05D005867 1.6e-161 573.5 484 65.5
COL.COLO4_13719 Corchorus olitorius HOM05D004109 ORTHO05D005867 2.1e-161 573.2 480 67.1
THA.LOC104799477 Tarenaya hassleriana HOM05D004109 ORTHO05D005867 2.7e-161 572.8 479 65.6
C03p62550 Brassica napus HOM05D004109 ORTHO05D005867 3.5e-161 572.4 474 66.0
BolC3t18512H Brassica oleracea HOM05D004109 ORTHO05D005867 3.5e-161 572.4 474 66.0
Cc02_g32120 Coffea canephora HOM05D004109 ORTHO05D005867 3.5e-161 572.4 487 63.9
Ah.05g178270 Amaranthus hybridus HOM05D004109 ORTHO05D005867 6.0e-161 571.6 481 65.1
CSS0036381 Camellia sinensis var. sinensis HOM05D004109 ORTHO05D005867 7.9e-161 571.2 484 65.1
Glyma.15G131700 Glycine max HOM05D004109 ORTHO05D005867 7.9e-161 571.2 477 66.0
BcaB02g09768 Brassica carinata HOM05D004109 ORTHO05D005867 1.0e-160 570.9 474 66.0
CARHR277790 Cardamine hirsuta HOM05D004109 ORTHO05D005867 1.0e-160 570.9 475 65.7
DCAR_003019 Daucus carota HOM05D004109 ORTHO05D005867 1.0e-160 570.9 475 65.1
Atru.chr12.891 Acer truncatum HOM05D004109 ORTHO05D005867 1.3e-160 570.5 470 66.4
AUR62000071 Chenopodium quinoa HOM05D004109 ORTHO05D005867 1.3e-160 570.5 480 64.0
Nn7g37134 Nelumbo nucifera HOM05D004109 ORTHO05D005867 1.3e-160 570.5 491 65.8
Sp2g26950 Schrenkiella parvula HOM05D004109 ORTHO05D005867 1.3e-160 570.5 484 65.3
BcaC01g02640 Brassica carinata HOM05D004109 ORTHO05D005867 2.3e-160 569.7 474 65.8
Nitab4.5_0008572g0030 Nicotiana tabacum HOM05D004109 ORTHO05D005867 3.0e-160 569.3 501 63.5
CiPaw.09G142500 Carya illinoinensis HOM05D004109 ORTHO05D005867 3.9e-160 568.9 504 64.3
FAN16G0137 Fragaria x ananassa HOM05D001785 ORTHO05D001933 3.9e-160 568.9 489 63.4
Aqoxy7G00406 Aquilegia oxysepala HOM05D004109 ORTHO05D005867 5.1e-160 568.5 487 65.7
AL8G41120 Arabidopsis lyrata HOM05D004109 ORTHO05D005867 5.1e-160 568.5 472 66.1
BcaC04g23349 Brassica carinata HOM05D004109 ORTHO05D005867 5.1e-160 568.5 484 65.1
BolC9t53868H Brassica oleracea HOM05D004109 ORTHO05D005867 5.1e-160 568.5 484 65.1
Migut.B01142 Erythranthe guttata HOM05D004109 ORTHO05D005867 5.1e-160 568.5 480 64.4
Glyma.09G025600 Glycine max HOM05D004109 ORTHO05D005867 5.1e-160 568.5 477 66.0
Nitab4.5_0001793g0060 Nicotiana tabacum HOM05D004109 ORTHO05D005867 5.1e-160 568.5 485 64.7
ClCG03G008220 Citrullus lanatus HOM05D004109 ORTHO05D005867 6.7e-160 568.2 478 66.9
MBI02_g14218_MAGBIO Magnolia biondii HOM05D004109 ORTHO05D005867 6.7e-160 568.2 486 65.2
Hund27096 Selenicereus undatus HOM05D004109 ORTHO05D005867 6.7e-160 568.2 482 63.9
Carub.0008s2466 Capsella rubella HOM05D004109 ORTHO05D005867 8.7e-160 567.8 474 66.2
Aa31LG1G12300 Aethionema arabicum HOM05D004109 ORTHO05D005867 1.5e-159 567.0 476 65.3
MSTRG.20474 Avicennia marina HOM05D004109 ORTHO05D005867 3.3e-159 565.8 479 64.1
MELO3C002828.2 Cucumis melo HOM05D004109 ORTHO05D005867 3.3e-159 565.8 484 65.7
CsaV3_1G037190 Cucumis sativus L. HOM05D004109 ORTHO05D005867 5.6e-159 565.1 478 66.3
AT5G63890 Arabidopsis thaliana HOM05D004109 ORTHO05D005867 9.6e-159 564.3 472 65.9
Solyc02g071890.3 Solanum lycopersicum HOM05D004109 ORTHO05D005867 9.6e-159 564.3 485 64.9
Thecc.10G182100 Theobroma cacao HOM05D004109 ORTHO05D005867 9.6e-159 564.3 501 63.5
C09p09570 Brassica napus HOM05D004109 ORTHO05D005867 1.3e-158 563.9 484 64.7
Nitab4.5_0001778g0190 Nicotiana tabacum HOM05D004109 ORTHO05D005867 1.3e-158 563.9 485 64.7
SGA_v2.0_scaffold114G32023 Striga asiatica HOM05D004109 ORTHO05D005867 1.6e-158 563.5 480 64.0
Cpa.g.sc139.36 Carica papaya HOM05D004109 ORTHO05D005867 2.1e-158 563.1 485 63.9
Sed0019466 Sechium edule HOM05D004109 ORTHO05D005867 3.7e-158 562.4 478 66.1
Duzib192G0069 Durio zibethinus HOM05D004109 ORTHO05D005867 4.8e-158 562.0 474 65.6
Lalb_Chr20g0120131 Lupinus albus HOM05D004109 ORTHO05D005867 6.2e-158 561.6 494 63.8
Phvul.006G126900 Phaseolus vulgaris HOM05D004109 ORTHO05D005867 6.2e-158 561.6 477 64.8
THA.LOC104810828 Tarenaya hassleriana HOM05D004109 ORTHO05D005867 8.1e-158 561.2 476 64.5
CAN.G411.27 Capsicum annuum HOM05D004109 ORTHO05D005867 1.1e-157 560.8 486 64.4
Ca_00854_v3 Cicer arietinum L. HOM05D004109 ORTHO05D005867 1.4e-157 560.5 472 66.3
Sed0002561 Sechium edule HOM05D004109 ORTHO05D005867 1.4e-157 560.5 478 66.1
CDE06G2252 Ceratophyllum demersum HOM05D004109 ORTHO05D005867 5.3e-157 558.5 477 63.5
PSO675G4088 Papaver somniferum HOM05D004109 ORTHO05D005867 5.3e-157 558.5 487 62.8
QL08p023474 Quercus lobata HOM05D004109 ORTHO05D005867 2.6e-156 556.2 474 65.8
Sopen02g020880 Solanum pennellii HOM05D004109 ORTHO05D005867 3.4e-156 555.8 474 65.4
Sabra16G0315800 Salix brachista HOM05D004109 ORTHO05D005867 4.5e-156 555.4 475 65.5
ATR0810G187 Amborella trichopoda HOM05D004109 ORTHO05D005867 2.9e-155 552.7 477 63.7
PSO675G5109 Papaver somniferum HOM05D004109 ORTHO05D005867 3.8e-155 552.4 486 62.6
Os01g0232700 Oryza sativa ssp. japonica HOM05D004109 ORTHO05D005867 4.9e-155 552.0 477 63.3
arahy.Tifrunner.gnm1.ann1.E4EMQ7 Arachis hypogaea HOM05D004109 ORTHO05D005867 6.5e-155 551.6 471 64.8
HPP92_000958 Vanilla planifolia HOM05D004109 ORTHO05D005867 6.5e-155 551.6 490 62.0
Medtr2g030520 Medicago truncatula HOM05D004109 ORTHO05D005867 8.4e-155 551.2 471 64.5
arahy.Tifrunner.gnm1.ann1.S2DTMZ Arachis hypogaea HOM05D004109 ORTHO05D005867 1.4e-154 550.4 470 63.6
arahy.Tifrunner.gnm1.ann1.NJCF43 Arachis hypogaea HOM05D004256 ORTHO05D005224 7.1e-154 548.1 470 63.4
Psat1g166680 Pisum sativum HOM05D004109 ORTHO05D005867 2.1e-153 546.6 472 64.2
RcHm_v2.0_Chr7g0241131 Rosa chinensis HOM05D004109 ORTHO05D005867 2.7e-153 546.2 504 61.3
Cfa005415 Carpinus fangiana HOM05D004109 ORTHO05D005867 1.8e-152 543.5 487 64.3
VMungo0540G0358 Vigna mungo HOM05D004109 ORTHO05D005867 2.3e-152 543.1 480 63.3
Glyma.08G081500 Glycine max HOM05D004109 ORTHO05D005867 1.9e-151 540.0 465 63.4
CDE03G0162 Ceratophyllum demersum HOM05D004109 ORTHO05D005867 2.5e-151 539.7 483 61.7
Lj4g0018356 Lotus japonicus HOM05D004109 ORTHO05D005867 2.5e-151 539.7 470 63.2
arahy.Tifrunner.gnm1.ann1.X3TBAN Arachis hypogaea HOM05D004109 ORTHO05D005867 4.3e-151 538.9 509 60.1
Phvul.002G198300 Phaseolus vulgaris HOM05D004109 ORTHO05D005867 2.1e-150 536.6 465 63.4
SEGI_09299 Sequoiadendron giganteum HOM05D004109 ORTHO05D005867 1.0e-147 527.7 488 60.2
unitig_0.g2208 Utricularia gibba HOM05D004109 ORTHO05D005867 8.5e-147 524.6 487 58.7
Sc26g0000620 Simmondsia chinensis HOM05D004109 ORTHO05D005867 3.2e-146 522.7 450 64.4
BcaNung04631 Brassica carinata HOM05D004109 ORTHO05D005867 1.0e-139 501.1 454 62.8
Nitab4.5_0003703g0080 Nicotiana tabacum HOM05D004109 ORTHO05D005867 1.2e-137 494.2 419 64.9
Pp3c25_2460 Physcomitrium patens HOM05D004109 ORTHO05D005867 6.9e-133 478.4 498 53.8
Pp3c16_4820 Physcomitrium patens HOM05D004109 ORTHO05D005867 7.2e-130 468.4 486 55.1
Mapoly0060s0093 Marchantia polymorpha HOM05D004109 ORTHO05D005867 6.1e-129 465.3 487 54.2
SMO137G0061 Selaginella moellendorffii HOM05D004109 ORTHO05D005867 2.8e-126 456.4 470 55.5
AagrBONN_evm.TU.Sc2ySwM_228.1565 Anthoceros agrestis HOM05D004109 ORTHO05D005867 3.7e-126 456.1 513 52.2
Cre02.g077350 Chlamydomonas reinhardtii HOM05D004109 ORTHO05D005867 6.3e-126 455.3 475 54.9
CBR_g8928 Chara braunii HOM05D004109 ORTHO05D005867 1.6e-124 450.7 474 53.4
AUR62019245 Chenopodium quinoa HOM05D004109 ORTHO05D005867 6.7e-120 435.3 402 59.7
PRCOL_00002586 Prasinoderma coloniale HOM05D004109 ORTHO05D005867 1.2e-119 434.5 490 51.2
MCO06G190 Micromonas commoda HOM05D004109 ORTHO05D005867 3.4e-111 406.4 476 51.5
CSS0014434 Camellia sinensis var. sinensis HOM05D004109 ORTHO05D005867 5.7e-111 405.6 364 63.7
Dinv23908 Davidia involucrata HOM05D004109 ORTHO05D005867 1.8e-104 384.0 364 61.8
Peaxi162Scf00112g01722 Petunia axillaris HOM05D004109 ORTHO05D005867 3.5e-100 369.8 224 81.7
SMO170G0053 Selaginella moellendorffii HOM05D004109 ORTHO05D005867 1.2e-89 334.7 362 52.2
Haze_16420 Corylus avellana HOM05D004109 ORTHO05D005867 8.1e-81 305.4 326 59.2
Cfa023091 Carpinus fangiana HOM05D004109 ORTHO05D005867 1.9e-77 294.3 506 38.5
Haze_01914 Corylus avellana HOM05D004109 ORTHO05D005867 1.2e-76 291.6 167 85.6
VMungo0251G3018 Vigna mungo HOM05D004109 ORTHO05D005867 5.6e-74 282.7 163 84.0
Zm00001eb059830 Zea mays HOM05D004109 ORTHO05D005867 1.2e-71 275.0 304 54.9
TPR.G26361 Trifolium pratense HOM05D004109 ORTHO05D005867 2.9e-70 270.4 316 53.5
VMungo0251G1323 Vigna mungo HOM05D004256 ORTHO05D005224 1.7e-67 261.2 305 52.1
BolC8t51924H Brassica oleracea HOM05D004109 ORTHO05D005867 1.1e-56 225.3 212 58.0
C01p45280 Brassica napus HOM05D004109 ORTHO05D005867 3.4e-55 220.3 202 60.4
Lsat_1_v5_gn_0_46200 Lactuca sativa HOM05D004109 ORTHO05D005867 3.4e-55 220.3 259 47.5
C03p60030 Brassica napus HOM05D004109 ORTHO05D005867 2.9e-54 217.2 202 58.9
BolC3t15408H Brassica oleracea HOM05D004109 ORTHO05D005867 4.2e-53 213.4 227 55.1
Migut.B01141 Erythranthe guttata HOM05D004109 ORTHO05D005867 4.2e-53 213.4 426 39.4
Peaxi162Scf00112g01719 Petunia axillaris HOM05D004109 ORTHO05D005867 2.3e-51 207.6 259 50.2
Actinidia34688 Actinidia chinensis HOM05D004109 ORTHO05D005867 7.4e-50 202.6 247 51.4
TPR.G39866 Trifolium pratense HOM05D004109 ORTHO05D005867 3.7e-49 200.3 111 87.4
BcaC01g02810 Brassica carinata HOM05D004109 ORTHO05D005867 3.1e-48 197.2 202 54.5
Haze_27135 Corylus avellana HOM05D004109 ORTHO05D005867 1.3e-46 191.8 462 33.5
CSS0037475 Camellia sinensis var. sinensis HOM05D004109 ORTHO05D005867 2.3e-43 181.0 109 81.7
Haze_01911 Corylus avellana HOM05D004109 ORTHO05D001172 3.4e-39 167.2 264 45.8
vmacro20532 Vaccinium macrocarpon HOM05D004109 ORTHO05D426529 7.1e-37 159.5 131 70.2
PSO675G6350 Papaver somniferum HOM05D004109 ORTHO05D005867 2.5e-34 151.0 232 45.3
CSS0025757 Camellia sinensis var. sinensis HOM05D004109 ORTHO05D005867 1.1e-32 145.6 104 70.2
vmacro20533 Vaccinium macrocarpon HOM05D004109 ORTHO05D000800 1.5e-31 141.7 139 61.9
PGSC0003DMG400028409 Solanum tuberosum HOM05D004109 ORTHO05D005867 8.5e-30 136.0 76 85.5
Lsat_1_v5_gn_0_43980 Lactuca sativa HOM05D004109 ORTHO05D005867 2.0e-23 114.8 125 44.0
HanXRQChr17g0545961 Helianthus annuus HOM05D004109 ORTHO05D225632 6.5e-22 109.8 84 63.1
Lsat_1_v5_gn_2_130860 Lactuca sativa HOM05D004109 ORTHO05D019780 7.4e-18 96.3 67 76.1
SMO137G0105 Selaginella moellendorffii HOM05D004109 ORTHO05D019780 1.7e-17 95.1 225 36.0
vmacro20529 Vaccinium macrocarpon HOM05D004109 ORTHO05D427059 4.5e-15 87.0 56 80.4
BcaC09g48845 Brassica carinata HOM05D004109 ORTHO05D009034 2.9e-14 84.3 197 35.0
AagrBONN_evm.TU.Sc2ySwM_117.3019 Anthoceros agrestis HOM05D000719 ORTHO05D000569 3.8e-14 84.0 59 72.9
Actinidia02690 Actinidia chinensis HOM05D004109 ORTHO05D054316 8.5e-14 82.8 50 82.0
PSO063G0645 Papaver somniferum HOM05D004109 ORTHO05D019780 8.5e-14 82.8 57 77.2
Hma1.2p1_0258F.1_g104030 Hydrangea macrophylla HOM05D004109 ORTHO05D005867 4.2e-13 80.5 60 66.7
vmacro06073 Vaccinium macrocarpon HOM05D000331 ORTHO05D021523 1.1e-08 65.9 47 74.5
BolC3t18267H Brassica oleracea HOM05D004109 ORTHO05D019780 2.4e-08 64.7 40 80.0
vmacro08382 Vaccinium macrocarpon HOM05D000522 ORTHO05D004380 3.1e-08 64.3 44 79.5
arahy.Tifrunner.gnm1.ann1.P7LCDJ Arachis hypogaea HOM05D004109 ORTHO05D019780 4.5e-07 60.5 48 70.8
BolC3t18268H Brassica oleracea HOM05D004109 ORTHO05D005867 5.9e-07 60.1 36 77.8
Zm00001eb213480 Zea mays HOM05D002921 ORTHO05D003258 1.3e-06 58.9 51 64.7
vmacro09568 Vaccinium macrocarpon HOM05D004109 ORTHO05D003511 1.7e-06 58.5 66 53.0
arahy.Tifrunner.gnm1.ann1.V2D64V Arachis hypogaea HOM05D004109 ORTHO05D019780 3.8e-06 57.4 69 55.1
SMO137G0306 Selaginella moellendorffii HOM05D004109 ORTHO05D377039 5.0e-06 57.0 34 73.5
Glyma.20G022700 Glycine max HOM05D004109 ORTHO05D019780 6.5e-06 56.6 35 77.1
arahy.Tifrunner.gnm1.ann1.E8SK3Y Arachis hypogaea HOM05D004109 ORTHO05D084058 8.5e-06 56.2 35 77.1


User provided reference genes

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