Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro23211 Vaccinium macrocarpon HOM05D007037 ORTHO05D006691 7.8e-31 136.7 82 100.0
Rhsim13G0153300 Rhododendron simsii HOM05D007037 ORTHO05D006691 2.4e-19 98.6 82 79.3
CSS0006945 Camellia sinensis var. sinensis HOM05D007037 ORTHO05D006691 2.1e-15 85.5 76 59.2
Nitab4.5_0000005g0340 Nicotiana tabacum HOM05D007037 ORTHO05D006691 2.1e-15 85.5 78 52.6
Nitab4.5_0009030g0010 Nicotiana tabacum HOM05D007037 ORTHO05D006691 3.5e-15 84.7 78 52.6
QL05p073032 Quercus lobata HOM05D007037 ORTHO05D006691 3.5e-15 84.7 78 51.3
Dinv13899 Davidia involucrata HOM05D001191 ORTHO05D000979 1.0e-14 83.2 76 52.6
MD10G1322200 Malus domestica HOM05D007037 ORTHO05D006691 2.3e-14 82.0 76 53.9
Oeu025269.1 Olea europaea HOM05D007037 ORTHO05D006691 3.9e-14 81.3 78 56.4
TAR624G1029 Trochodendron aralioides HOM05D007037 ORTHO05D006691 3.9e-14 81.3 83 53.0
Prupe.4G019700 Prunus persica HOM05D007037 ORTHO05D006691 6.7e-14 80.5 76 51.3
Hma1.2p1_0749F.1_g212630 Hydrangea macrophylla HOM05D007037 ORTHO05D006691 1.5e-13 79.3 81 51.9
Hma1.2p1_0749F.1_g212635 Hydrangea macrophylla HOM05D007037 ORTHO05D006691 1.5e-13 79.3 81 51.9
RcHm_v2.0_Chr5g0002881 Rosa chinensis HOM05D007037 ORTHO05D006691 1.5e-13 79.3 79 54.4
DCAR_008156 Daucus carota HOM05D007037 ORTHO05D006691 2.5e-13 78.6 79 53.2
CiPaw.09G092600 Carya illinoinensis HOM05D007037 ORTHO05D006691 3.3e-13 78.2 78 48.7
Thecc.06G221700 Theobroma cacao HOM05D007037 ORTHO05D006691 3.3e-13 78.2 78 52.6
Eucgr.E04050 Eucalyptus grandis HOM05D007037 ORTHO05D006691 4.3e-13 77.8 78 52.6
FAN25G2740 Fragaria x ananassa HOM05D007037 ORTHO05D006691 4.3e-13 77.8 79 51.9
MD05G1347800 Malus domestica HOM05D007037 ORTHO05D006691 4.3e-13 77.8 76 51.3
Nitab4.5_0005074g0010 Nicotiana tabacum HOM05D007037 ORTHO05D006691 5.7e-13 77.4 83 51.8
FAN21G2981 Fragaria x ananassa HOM05D001191 ORTHO05D000979 1.3e-12 76.3 79 51.9
Nitab4.5_0002827g0030 Nicotiana tabacum HOM05D007037 ORTHO05D006691 2.1e-12 75.5 83 50.6
Potri.011G004400 Populus trichocarpa HOM05D007037 ORTHO05D006691 2.8e-12 75.1 76 47.4
CSS0026389 Camellia sinensis var. sinensis HOM05D007037 ORTHO05D006691 4.8e-12 74.3 77 54.5
Potri.004G013601 Populus trichocarpa HOM05D007037 ORTHO05D006691 1.4e-11 72.8 76 48.7
Cc09_g01610 Coffea canephora HOM05D007037 ORTHO05D006691 5.3e-11 70.9 78 46.2
COL.COLO4_00342 Corchorus olitorius HOM05D007037 ORTHO05D006691 1.2e-10 69.7 76 50.0
Gohir.D05G173900 Gossypium hirsutum HOM05D007037 ORTHO05D006691 1.2e-10 69.7 78 47.4
Atru.chr10.2236 Acer truncatum HOM05D007037 ORTHO05D006691 1.5e-10 69.3 77 51.9
Gohir.A05G170900 Gossypium hirsutum HOM05D007037 ORTHO05D006691 1.5e-10 69.3 78 47.4
Gorai.009G179200 Gossypium raimondii HOM05D007037 ORTHO05D006691 1.5e-10 69.3 78 47.4
Lsat_1_v5_gn_4_60821 Lactuca sativa HOM05D007037 ORTHO05D006691 1.5e-10 69.3 77 49.4
Manes.16G006400 Manihot esculenta HOM05D007037 ORTHO05D006691 1.5e-10 69.3 79 48.1
Aqoxy1G02111 Aquilegia oxysepala HOM05D007037 ORTHO05D006691 2.0e-10 68.9 75 53.3
Duzib192G0147 Durio zibethinus HOM05D007037 ORTHO05D006691 2.6e-10 68.6 78 48.7
Peaxi162Scf00331g00119 Petunia axillaris HOM05D007037 ORTHO05D006691 5.8e-10 67.4 79 45.6
Sed0010286 Sechium edule HOM05D007037 ORTHO05D006691 5.8e-10 67.4 75 50.7
Manes.01G159201 Manihot esculenta HOM05D007037 ORTHO05D006691 7.6e-10 67.0 79 46.8
PGSC0003DMG400016450 Solanum tuberosum HOM05D007037 ORTHO05D006691 7.6e-10 67.0 85 43.5
PGSC0003DMG400019869 Solanum tuberosum HOM05D007037 ORTHO05D006691 7.6e-10 67.0 74 47.3
ECA234G0681 Erigeron canadensis HOM05D007037 ORTHO05D006691 1.0e-09 66.6 78 44.9
CsaV3_6G049020 Cucumis sativus L. HOM05D007037 ORTHO05D006691 1.7e-09 65.9 75 46.7
FvH4_3g01970 Fragaria vesca HOM05D007037 ORTHO05D006691 1.7e-09 65.9 78 52.6
Peaxi162Scf01204g00120 Petunia axillaris HOM05D007037 ORTHO05D006691 2.9e-09 65.1 79 50.6
Sed0008683 Sechium edule HOM05D007037 ORTHO05D006691 3.8e-09 64.7 75 45.3
ClCG01G021940 Citrullus lanatus HOM05D007037 ORTHO05D006691 5.0e-09 64.3 75 46.7
Medtr2g023440 Medicago truncatula HOM05D007037 ORTHO05D006691 8.4e-09 63.5 77 42.9
Glyma.09G004000 Glycine max HOM05D007037 ORTHO05D006691 1.1e-08 63.2 78 43.6
Sopen02g011150 Solanum pennellii HOM05D007037 ORTHO05D006691 1.1e-08 63.2 79 43.0
Sopen02g025300 Solanum pennellii HOM05D007037 ORTHO05D006691 1.1e-08 63.2 85 42.4
Ciclev10018055m.g Citrus clementina HOM05D007037 ORTHO05D006691 1.4e-08 62.8 78 42.3
Potri.014G153900 Populus trichocarpa HOM05D009550 ORTHO05D006691 1.4e-08 62.8 81 40.7
Ca_26471_v3 Cicer arietinum L. HOM05D007037 ORTHO05D006691 9.3e-08 60.1 86 43.0
Glyma.17G012900 Glycine max HOM05D007037 ORTHO05D006691 9.3e-08 60.1 78 47.4
TPR.G13436 Trifolium pratense HOM05D007037 ORTHO05D006691 1.2e-07 59.7 83 42.2
Cfa000214 Carpinus fangiana HOM05D007037 ORTHO05D006691 1.6e-07 59.3 78 55.1
TAR626G0921 Trochodendron aralioides HOM05D007037 ORTHO05D006691 3.5e-07 58.2 37 70.3
CiPaw.10G071700 Carya illinoinensis HOM05D007037 ORTHO05D006691 4.6e-07 57.8 78 46.2
Ca_21080_v3 Cicer arietinum L. HOM05D007037 ORTHO05D006691 4.6e-07 57.8 76 42.1
Sabra11G0003500 Salix brachista HOM05D007037 ORTHO05D006691 4.6e-07 57.8 80 33.8
Cc05_g04380 Coffea canephora HOM05D007037 ORTHO05D006691 6.1e-07 57.4 81 43.2
Haze_06807 Corylus avellana HOM05D007037 ORTHO05D006691 6.1e-07 57.4 78 53.8
SalBow8G3366 Salvia bowleyana HOM05D007037 ORTHO05D006691 6.1e-07 57.4 67 46.3
Thhalv10009555m.g Eutrema salsugineum HOM05D001191 ORTHO05D000979 1.0e-06 56.6 78 39.7
THA.LOC104823525 Tarenaya hassleriana HOM05D007037 ORTHO05D006691 1.3e-06 56.2 82 43.9
arahy.Tifrunner.gnm1.ann1.CZMF37 Arachis hypogaea HOM05D007037 ORTHO05D006691 1.8e-06 55.8 76 39.5
Glyma.07G261100 Glycine max HOM05D007037 ORTHO05D006691 1.8e-06 55.8 78 42.3
Medtr4g132230 Medicago truncatula HOM05D007037 ORTHO05D006691 1.8e-06 55.8 76 40.8
Sp1g10350 Schrenkiella parvula HOM05D001191 ORTHO05D000979 1.8e-06 55.8 76 39.5
TPR.G37004 Trifolium pratense HOM05D007037 ORTHO05D006691 1.8e-06 55.8 76 39.5
arahy.Tifrunner.gnm1.ann1.98H95S Arachis hypogaea HOM05D007037 ORTHO05D006691 2.3e-06 55.5 77 40.3
Actinidia09718 Actinidia chinensis HOM05D007037 ORTHO05D006691 3.0e-06 55.1 82 37.8
BcaC05g25043 Brassica carinata HOM05D001191 ORTHO05D000979 3.0e-06 55.1 76 40.8
Phvul.003G079400 Phaseolus vulgaris HOM05D007037 ORTHO05D006691 3.0e-06 55.1 78 39.7
Nn1g07147 Nelumbo nucifera HOM05D009550 ORTHO05D006691 3.9e-06 54.7 84 48.8
Sabra04G0006400 Salix brachista HOM05D007037 ORTHO05D006691 3.9e-06 54.7 76 47.4
Aa31LG1G3030 Aethionema arabicum HOM05D007037 ORTHO05D006691 6.7e-06 53.9 76 38.2
Lj4g0019440 Lotus japonicus HOM05D007037 ORTHO05D006691 8.7e-06 53.5 78 38.5
Lalb_Chr07g0177181 Lupinus albus HOM05D007037 ORTHO05D006691 8.7e-06 53.5 78 41.0
Psat4g006560 Pisum sativum HOM05D007037 ORTHO05D006691 8.7e-06 53.5 76 40.8


User provided reference genes

Program Settings