Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro18966 Vaccinium macrocarpon HOM05D003948 ORTHO05D004610 8.8e-204 713.4 355 100.0
Rhsim08G0216000 Rhododendron simsii HOM05D003948 ORTHO05D004610 8.7e-143 510.8 313 82.4
Actinidia01766 Actinidia chinensis HOM05D003948 ORTHO05D004610 2.3e-127 459.5 329 71.1
Dinv30573 Davidia involucrata HOM05D003948 ORTHO05D004610 1.5e-126 456.8 329 70.8
Actinidia15794 Actinidia chinensis HOM05D003948 ORTHO05D004610 2.6e-123 446.0 330 70.3
TAR625G1371 Trochodendron aralioides HOM05D003948 ORTHO05D004610 7.6e-115 417.9 323 66.9
Hma1.2p1_0317F.1_g123650 Hydrangea macrophylla HOM05D003948 ORTHO05D004610 6.5e-114 414.8 330 65.2
Manes.11G053200 Manihot esculenta HOM05D003948 ORTHO05D004610 6.5e-114 414.8 328 64.0
Potri.003G061800 Populus trichocarpa HOM05D003948 ORTHO05D004610 9.3e-113 411.0 325 65.5
Sabra03G0035900 Salix brachista HOM05D003948 ORTHO05D004610 1.8e-111 406.8 326 64.7
Ciclev10026043m.g Citrus clementina HOM05D003948 ORTHO05D004610 1.5e-110 403.7 329 63.8
COL.COLO4_12905 Corchorus olitorius HOM05D003948 ORTHO05D004610 2.5e-110 402.9 323 66.3
CiPaw.01G244700 Carya illinoinensis HOM05D003948 ORTHO05D004610 3.3e-110 402.5 325 65.5
CSS0016874 Camellia sinensis var. sinensis HOM05D003948 ORTHO05D004610 9.7e-110 401.0 330 65.2
Cfa002007 Carpinus fangiana HOM05D003948 ORTHO05D004610 1.3e-109 400.6 326 65.0
MBI04_g24205_MAGBIO Magnolia biondii HOM05D003948 ORTHO05D004610 3.7e-109 399.1 329 62.9
Haze_16515 Corylus avellana HOM05D003948 ORTHO05D004610 8.2e-109 397.9 327 64.2
Nn8g39388 Nelumbo nucifera HOM05D003948 ORTHO05D004610 5.3e-108 395.2 329 63.2
Eucgr.J03052 Eucalyptus grandis HOM05D003948 ORTHO05D004610 3.2e-105 386.0 322 61.2
CiPaw.03G241800 Carya illinoinensis HOM05D003948 ORTHO05D004610 5.5e-105 385.2 330 59.4
RcHm_v2.0_Chr2g0136511 Rosa chinensis HOM05D003948 ORTHO05D004610 5.5e-105 385.2 328 61.9
CAN.G407.106 Capsicum annuum HOM05D003948 ORTHO05D004610 7.2e-105 384.8 325 63.1
Sopen03g035350 Solanum pennellii HOM05D003948 ORTHO05D004610 2.7e-104 382.9 328 61.9
Lalb_Chr22g0351001 Lupinus albus HOM05D003948 ORTHO05D004610 6.1e-104 381.7 335 60.6
AUR62011555 Chenopodium quinoa HOM05D003948 ORTHO05D004610 7.9e-104 381.3 327 60.2
AUR62016374 Chenopodium quinoa HOM05D003948 ORTHO05D004610 1.0e-103 380.9 327 60.6
Solyc03g116460.4 Solanum lycopersicum HOM05D003948 ORTHO05D004610 8.8e-103 377.9 333 61.3
EL10Ac9g21937 Beta vulgaris HOM05D003948 ORTHO05D004610 1.5e-102 377.1 331 58.9
Gohir.A10G076166 Gossypium hirsutum HOM05D003948 ORTHO05D004610 1.5e-102 377.1 321 61.7
QL02p087786 Quercus lobata HOM05D003948 ORTHO05D004610 2.5e-102 376.3 327 58.4
Gohir.D05G126200 Gossypium hirsutum HOM05D003948 ORTHO05D004610 3.3e-102 375.9 321 62.9
PGR031G2458 Punica granatum HOM05D003948 ORTHO05D004610 4.3e-102 375.6 330 60.9
Dinv36546 Davidia involucrata HOM05D003948 ORTHO05D004610 5.7e-102 375.2 327 60.6
Gorai.009G130200 Gossypium raimondii HOM05D003948 ORTHO05D004610 7.4e-102 374.8 321 63.2
Nitab4.5_0002257g0010 Nicotiana tabacum HOM05D003948 ORTHO05D004610 7.4e-102 374.8 333 60.4
Gorai.011G081300 Gossypium raimondii HOM05D003948 ORTHO05D004610 9.7e-102 374.4 321 61.7
Cpa.g.sc10.224 Carica papaya HOM05D003948 ORTHO05D004610 1.7e-101 373.6 294 66.0
Actinidia22003 Actinidia chinensis HOM05D003948 ORTHO05D004610 8.2e-101 371.3 327 59.3
Nitab4.5_0006574g0020 Nicotiana tabacum HOM05D003948 ORTHO05D004610 8.2e-101 371.3 325 60.3
PGSC0003DMG402000630 Solanum tuberosum HOM05D003948 ORTHO05D004610 8.2e-101 371.3 322 61.2
Sed0014623 Sechium edule HOM05D003948 ORTHO05D004610 2.4e-100 369.8 322 62.1
Cc04_g04060 Coffea canephora HOM05D003948 ORTHO05D004610 3.1e-100 369.4 326 60.1
ClCG07G012790 Citrullus lanatus HOM05D003948 ORTHO05D004610 6.9e-100 368.2 326 61.0
Thecc.09G123100 Theobroma cacao HOM05D003948 ORTHO05D004610 6.9e-100 368.2 329 57.8
Duzib168G1107 Durio zibethinus HOM05D003948 ORTHO05D004610 9.1e-100 367.9 327 59.0
Medtr2g103300 Medicago truncatula HOM05D003948 ORTHO05D004610 1.2e-99 367.5 290 65.2
Gohir.A05G125200 Gossypium hirsutum HOM05D003948 ORTHO05D004610 1.5e-99 367.1 319 62.1
MD17G1205900 Malus domestica HOM05D003948 ORTHO05D004610 1.5e-99 367.1 327 59.0
Actinidia40456 Actinidia chinensis HOM05D003948 ORTHO05D004610 2.0e-99 366.7 325 59.1
Prupe.7G239700 Prunus persica HOM05D003948 ORTHO05D004610 2.6e-99 366.3 328 57.9
MD17G1205400 Malus domestica HOM05D003948 ORTHO05D004610 3.4e-99 365.9 326 58.6
GSVIVG01017270001 Vitis vinifera HOM05D003948 ORTHO05D004610 7.7e-99 364.8 258 71.3
Gohir.A05G017900 Gossypium hirsutum HOM05D003948 ORTHO05D004610 2.2e-98 363.2 318 56.6
TWI34G1010 Tripterygium wilfordii HOM05D003948 ORTHO05D004610 2.2e-98 363.2 330 59.4
Gohir.D05G018800 Gossypium hirsutum HOM05D003948 ORTHO05D004610 2.9e-98 362.8 321 56.7
MELO3C017899.2 Cucumis melo HOM05D003948 ORTHO05D004610 3.8e-98 362.5 327 59.6
TPR.G37189 Trifolium pratense HOM05D003948 ORTHO05D004610 6.5e-98 361.7 296 64.2
Aqoxy7G02097 Aquilegia oxysepala HOM05D003948 ORTHO05D004610 8.5e-98 361.3 323 61.9
FAN14G0295 Fragaria x ananassa HOM05D003948 ORTHO05D004610 8.5e-98 361.3 326 59.5
Gorai.009G019200 Gossypium raimondii HOM05D003948 ORTHO05D004610 8.5e-98 361.3 318 56.9
Manes.14G130600 Manihot esculenta HOM05D003948 ORTHO05D004610 8.5e-98 361.3 319 58.0
Psat5g301000 Pisum sativum HOM05D003948 ORTHO05D004610 1.9e-97 360.1 285 64.9
FAN05G4627 Fragaria x ananassa HOM05D003948 ORTHO05D004610 2.5e-97 359.8 326 59.5
CANSAT56G2529 Cannabis sativa HOM05D003948 ORTHO05D004610 3.2e-97 359.4 326 58.9
Ah.01g011210 Amaranthus hybridus HOM05D003948 ORTHO05D004610 4.2e-97 359.0 324 58.3
Ca_01082_v3 Cicer arietinum L. HOM05D003948 ORTHO05D004610 4.2e-97 359.0 295 62.4
CsaV3_4G001410 Cucumis sativus L. HOM05D003948 ORTHO05D004610 4.2e-97 359.0 327 59.0
VMungo1080G0933 Vigna mungo HOM05D003948 ORTHO05D004610 5.5e-97 358.6 292 64.7
Peaxi162Scf00274g00859 Petunia axillaris HOM05D003948 ORTHO05D004610 1.2e-96 357.5 322 58.4
COL.COLO4_05762 Corchorus olitorius HOM05D003948 ORTHO05D004610 1.6e-96 357.1 330 56.7
Duzib187G0771 Durio zibethinus HOM05D003948 ORTHO05D004610 1.6e-96 357.1 329 57.1
AL1G27520 Arabidopsis lyrata HOM05D003948 ORTHO05D004610 7.9e-96 354.8 318 58.5
Glyma.15G010100 Glycine max HOM05D003948 ORTHO05D004610 7.9e-96 354.8 292 63.4
Prupe.3G081000 Prunus persica HOM05D003948 ORTHO05D004610 7.9e-96 354.8 251 68.1
Ciclev10008863m.g Citrus clementina HOM05D003948 ORTHO05D004610 1.0e-95 354.4 301 59.8
FAN02G3756 Fragaria x ananassa HOM05D003948 ORTHO05D004610 1.0e-95 354.4 328 58.2
AT1G15410 Arabidopsis thaliana HOM05D003948 ORTHO05D004610 1.4e-95 354.0 318 58.5
THA.LOC104813569 Tarenaya hassleriana HOM05D003948 ORTHO05D004610 1.8e-95 353.6 316 58.9
ATR1156G038 Amborella trichopoda HOM05D003948 ORTHO05D004610 5.1e-95 352.1 316 58.5
Glyma.13G363700 Glycine max HOM05D003948 ORTHO05D004610 2.0e-94 350.1 325 57.8
Rhsim01G0076600 Rhododendron simsii HOM05D003948 ORTHO05D004610 2.0e-94 350.1 317 57.7
RcHm_v2.0_Chr2g0089121 Rosa chinensis HOM05D003948 ORTHO05D004610 2.6e-94 349.7 332 54.2
Hund06577 Selenicereus undatus HOM05D003948 ORTHO05D004610 2.6e-94 349.7 327 55.7
Sp1g13770 Schrenkiella parvula HOM05D003948 ORTHO05D004610 3.3e-94 349.4 302 60.3
FAN23G0975 Fragaria x ananassa HOM05D003948 ORTHO05D004610 7.4e-94 348.2 327 54.1
Gorai.001G040900 Gossypium raimondii HOM05D003948 ORTHO05D004610 9.7e-94 347.8 330 54.5
Thhalv10008186m.g Eutrema salsugineum HOM05D003948 ORTHO05D004610 1.3e-93 347.4 319 58.0
FvH4_1g03590 Fragaria vesca HOM05D003948 ORTHO05D004610 2.8e-93 346.3 328 54.0
Carub.0001s1520 Capsella rubella HOM05D003948 ORTHO05D004610 3.7e-93 345.9 316 57.6
Gohir.A07G034800 Gossypium hirsutum HOM05D003948 ORTHO05D004610 3.7e-93 345.9 330 54.8
Lsat_1_v5_gn_4_105880 Lactuca sativa HOM05D003948 ORTHO05D004610 3.7e-93 345.9 244 71.7
Lj3g0004615 Lotus japonicus HOM05D003948 ORTHO05D004610 3.7e-93 345.9 292 64.0
FAN19G2000 Fragaria x ananassa HOM05D003948 ORTHO05D004610 4.8e-93 345.5 328 54.0
Gohir.D07G038800 Gossypium hirsutum HOM05D003948 ORTHO05D004610 6.3e-93 345.1 330 54.5
Rhsim01G0076700 Rhododendron simsii HOM05D003948 ORTHO05D004610 8.2e-93 344.7 324 57.7
CSS0012666 Camellia sinensis var. sinensis HOM05D003948 ORTHO05D004610 1.4e-92 344.0 319 58.3
FAN28G1194 Fragaria x ananassa HOM05D003948 ORTHO05D004610 1.4e-92 344.0 328 54.0
BcaC05g25483 Brassica carinata HOM05D003948 ORTHO05D004610 2.4e-92 343.2 302 59.3
C05p13580 Brassica napus HOM05D003948 ORTHO05D004610 5.3e-92 342.0 298 59.4
Hma1.2p1_0018F.1_g012660 Hydrangea macrophylla HOM05D003948 ORTHO05D004610 9.1e-92 341.3 315 54.3
A06p11460 Brassica napus HOM05D003948 ORTHO05D004610 1.2e-91 340.9 298 59.1
BraA06t24323Z Brassica rapa HOM05D003948 ORTHO05D004610 1.2e-91 340.9 298 59.1
CANSAT11G2309 Cannabis sativa HOM05D003948 ORTHO05D004610 1.5e-91 340.5 335 55.5
BolC5t30094H Brassica oleracea HOM05D003948 ORTHO05D004610 2.0e-91 340.1 295 59.7
Lj3g0025185 Lotus japonicus HOM05D003948 ORTHO05D004610 5.9e-91 338.6 255 66.7
Atru.chr7.1198 Acer truncatum HOM05D003948 ORTHO05D004610 7.7e-91 338.2 327 54.4
Dinv41531 Davidia involucrata HOM05D003948 ORTHO05D004610 1.3e-90 337.4 254 66.1
FAN26G0686 Fragaria x ananassa HOM05D003948 ORTHO05D004610 1.3e-90 337.4 353 51.3
DCAR_025486 Daucus carota HOM05D003948 ORTHO05D004610 1.9e-89 333.6 291 61.2
arahy.Tifrunner.gnm1.ann1.37ZKFY Arachis hypogaea HOM05D003948 ORTHO05D004610 2.5e-89 333.2 292 59.9
arahy.Tifrunner.gnm1.ann1.U8XBHX Arachis hypogaea HOM05D003948 ORTHO05D004610 2.5e-89 333.2 292 59.9
MSTRG.11117 Avicennia marina HOM05D003948 ORTHO05D004610 5.5e-89 332.0 328 54.6
Cpa.g.sc648.2 Carica papaya HOM05D003948 ORTHO05D004610 1.6e-88 330.5 295 59.3
Haze_25613 Corylus avellana HOM05D003948 ORTHO05D004610 2.3e-87 326.6 322 55.0
vmacro20597 Vaccinium macrocarpon HOM05D003948 ORTHO05D004610 5.2e-87 325.5 348 52.6
ClCG06G010930 Citrullus lanatus HOM05D003948 ORTHO05D004610 1.1e-86 324.3 323 52.6
Hma1.2p1_0018F.1_g012640 Hydrangea macrophylla HOM05D003948 ORTHO05D004610 3.3e-86 322.8 332 54.2
Eucgr.C01133 Eucalyptus grandis HOM05D003948 ORTHO05D004610 7.4e-86 321.6 287 57.5
Thecc.06G071300 Theobroma cacao HOM05D003948 ORTHO05D004610 2.4e-84 316.6 274 62.4
Ah.09g225870 Amaranthus hybridus HOM05D003948 ORTHO05D004610 9.1e-84 314.7 318 52.5
AUR62033477 Chenopodium quinoa HOM05D003948 ORTHO05D004610 1.6e-83 313.9 323 50.2
EL10Ac8g18617 Beta vulgaris HOM05D003948 ORTHO05D004610 4.5e-83 312.4 334 49.4
DCAR_014870 Daucus carota HOM05D003948 ORTHO05D004610 1.0e-82 311.2 316 51.6
PGR142G4293 Punica granatum HOM05D003948 ORTHO05D004610 6.5e-82 308.5 303 53.5
MELO3C026644.2 Cucumis melo HOM05D003948 ORTHO05D004610 8.5e-82 308.1 302 53.3
Sabra01G0139400 Salix brachista HOM05D003948 ORTHO05D004610 4.2e-81 305.8 354 51.7
arahy.Tifrunner.gnm1.ann1.VXE6AC Arachis hypogaea HOM05D003948 ORTHO05D004610 7.2e-81 305.1 318 51.3
arahy.Tifrunner.gnm1.ann1.T1A9DJ Arachis hypogaea HOM05D003948 ORTHO05D004610 1.6e-80 303.9 318 50.9
Sed0015734 Sechium edule HOM05D003948 ORTHO05D004610 2.1e-80 303.5 285 53.7
AUR62011090 Chenopodium quinoa HOM05D003948 ORTHO05D004610 2.7e-80 303.1 289 54.7
Cc06_g08780 Coffea canephora HOM05D003948 ORTHO05D004610 6.1e-80 302.0 320 50.9
Lj7A632T42 Lonicera japonica HOM05D003948 ORTHO05D004610 2.6e-78 296.6 279 56.3
CDE02G2452 Ceratophyllum demersum HOM05D003948 ORTHO05D004610 7.5e-78 295.0 303 51.5
SalBow2G2418 Salvia bowleyana HOM05D003948 ORTHO05D004610 1.7e-77 293.9 320 50.6
Glyma.17G116500 Glycine max HOM05D003948 ORTHO05D004610 2.8e-77 293.1 318 49.4
SGA_v2.0_scaffold5G02657 Striga asiatica HOM05D003948 ORTHO05D004610 3.7e-77 292.7 344 48.0
Medtr4g114000 Medicago truncatula HOM05D003948 ORTHO05D004610 8.3e-77 291.6 332 48.2
Lj4g0000861 Lotus japonicus HOM05D003948 ORTHO05D004610 1.1e-76 291.2 325 47.4
Psat4g040400 Pisum sativum HOM05D003948 ORTHO05D004610 1.4e-76 290.8 323 48.0
TPR.G10716 Trifolium pratense HOM05D003948 ORTHO05D004610 1.4e-76 290.8 364 45.6
Migut.D01056 Erythranthe guttata HOM05D003948 ORTHO05D004610 2.4e-76 290.0 320 51.6
Glyma.05G008200 Glycine max HOM05D003948 ORTHO05D004610 2.4e-76 290.0 318 50.0
SEGI_16675 Sequoiadendron giganteum HOM05D003948 ORTHO05D004610 5.3e-76 288.9 282 55.7
Phvul.003G162800 Phaseolus vulgaris HOM05D003948 ORTHO05D004610 3.8e-74 282.7 323 48.0
VMungo1215G2012 Vigna mungo HOM05D003948 ORTHO05D004610 3.8e-74 282.7 317 48.3
Ca_21696_v3 Cicer arietinum L. HOM05D003948 ORTHO05D004610 1.1e-73 281.2 324 47.2
Duzib235G1097 Durio zibethinus HOM05D003948 ORTHO05D004610 3.6e-72 276.2 260 56.5
Os01g0555200 Oryza sativa ssp. japonica HOM05D003948 ORTHO05D004610 8.0e-72 275.0 284 48.9
Zm00001eb342320 Zea mays HOM05D003948 ORTHO05D004610 3.0e-71 273.1 275 50.5
PSO170G0552 Papaver somniferum HOM05D003948 ORTHO05D004610 1.7e-69 267.3 269 54.3
ECA232G2488 Erigeron canadensis HOM05D003948 ORTHO05D004610 1.6e-67 260.8 161 77.0
SalBow2G0819 Salvia bowleyana HOM05D003948 ORTHO05D004610 7.7e-67 258.5 251 53.8
Rhsim03G0104000 Rhododendron simsii HOM05D003948 ORTHO05D004610 4.0e-63 246.1 160 76.9
Nn2g11965 Nelumbo nucifera HOM05D003948 ORTHO05D004610 2.6e-62 243.4 235 54.5
Dinv38099 Davidia involucrata HOM05D003948 ORTHO05D004610 9.8e-62 241.5 270 54.4
GSVIVG01015502001 Vitis vinifera HOM05D003948 ORTHO05D004610 1.6e-59 234.2 157 69.4
MD02G1035500 Malus domestica HOM05D003948 ORTHO05D004610 5.0e-58 229.2 236 51.3
Mapoly0023s0100 Marchantia polymorpha HOM05D003948 ORTHO05D004610 5.0e-58 229.2 175 60.0
FvH4_6g30270 Fragaria vesca HOM05D003948 ORTHO05D004610 3.6e-56 223.0 237 52.7
CARHR015960 Cardamine hirsuta HOM05D003948 ORTHO05D004610 2.0e-54 217.2 230 50.9
Gohir.D10G075401 Gossypium hirsutum HOM05D003948 ORTHO05D004610 1.3e-53 214.5 152 73.0
Atru.chr1.3072 Acer truncatum HOM05D003948 ORTHO05D004610 2.2e-45 187.2 223 49.3
AUR62011108 Chenopodium quinoa HOM05D003948 ORTHO05D004610 6.4e-45 185.7 240 44.6
Sc18g0000700 Simmondsia chinensis HOM05D003948 ORTHO05D004610 1.7e-42 177.6 211 46.4
SMO271G0179 Selaginella moellendorffii HOM05D003948 ORTHO05D004610 3.1e-39 166.8 236 40.7
Phvul.005G175301 Phaseolus vulgaris HOM05D003948 ORTHO05D004610 4.9e-37 159.5 173 49.7
Lj5A69T36 Lonicera japonica HOM05D003948 ORTHO05D004610 5.4e-36 156.0 113 73.5
CARHR015950 Cardamine hirsuta HOM05D003948 ORTHO05D004610 3.6e-32 143.3 86 80.2
FAN26G3201 Fragaria x ananassa HOM05D003948 ORTHO05D004610 2.3e-26 124.0 81 71.6
Lj1g0003343 Lotus japonicus HOM05D003948 ORTHO05D004610 8.7e-26 122.1 98 61.2
DCAR_000573 Daucus carota HOM05D003948 ORTHO05D004610 1.8e-23 114.4 82 68.3
Peaxi162Scf00274g00858 Petunia axillaris HOM05D003948 ORTHO05D004610 4.4e-22 109.8 77 72.7
Oeu041220.1 Olea europaea HOM05D003948 ORTHO05D004610 9.9e-22 108.6 80 62.5
Psat0s806g0040 Pisum sativum HOM05D003948 ORTHO05D004610 5.1e-18 96.3 117 38.5
ClCG09G013940 Citrullus lanatus HOM05D003948 ORTHO05D004610 9.9e-14 82.0 56 67.9


User provided reference genes

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