Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro18302 Vaccinium macrocarpon HOM05D007617 ORTHO05D007195 1.6e-62 242.7 126 100.0
Rhsim08G0047600 Rhododendron simsii HOM05D007617 ORTHO05D007195 2.8e-43 178.7 126 77.0
Hma1.2p1_0818F.1_g223400 Hydrangea macrophylla HOM05D007617 ORTHO05D007195 5.8e-25 117.9 135 57.0
Actinidia36140 Actinidia chinensis HOM05D007617 ORTHO05D007195 1.5e-20 103.2 138 48.6
QL02p073546 Quercus lobata HOM05D007617 ORTHO05D007195 3.3e-20 102.1 130 48.5
Dinv33408 Davidia involucrata HOM05D007617 ORTHO05D007195 5.6e-20 101.3 136 49.3
DCAR_011273 Daucus carota HOM05D007617 ORTHO05D007195 7.3e-20 100.9 133 52.6
Ciclev10017789m.g Citrus clementina HOM05D007617 ORTHO05D007195 9.0e-18 94.0 137 49.6
TPR.G31739 Trifolium pratense HOM05D007617 ORTHO05D007195 9.0e-18 94.0 127 46.5
Lalb_Chr21g0317701 Lupinus albus HOM05D007617 ORTHO05D007195 1.2e-17 93.6 129 46.5
Lalb_Chr02g0158101 Lupinus albus HOM05D007617 ORTHO05D007195 1.3e-16 90.1 131 46.6
Psat6g179560 Pisum sativum HOM05D007617 ORTHO05D007195 1.3e-16 90.1 127 45.7
Prupe.3G296000 Prunus persica HOM05D007617 ORTHO05D007195 2.9e-16 89.0 133 44.4
MD06G1161600 Malus domestica HOM05D007617 ORTHO05D007195 3.8e-16 88.6 136 44.9
Medtr1g093790 Medicago truncatula HOM05D007617 ORTHO05D007195 6.4e-16 87.8 128 47.7
Nitab4.5_0004496g0030 Nicotiana tabacum HOM05D007617 ORTHO05D007195 1.4e-15 86.7 133 45.9
Glyma.05G114700 Glycine max HOM05D007617 ORTHO05D007195 4.2e-15 85.1 130 46.9
ClCG05G013140 Citrullus lanatus HOM05D007617 ORTHO05D007195 9.3e-15 84.0 125 41.6
FvH4_5g06710 Fragaria vesca HOM05D007617 ORTHO05D007195 9.3e-15 84.0 134 48.5
RcHm_v2.0_Chr7g0191931 Rosa chinensis HOM05D007617 ORTHO05D007195 9.3e-15 84.0 134 47.0
FAN08G2040 Fragaria x ananassa HOM05D007617 ORTHO05D007195 1.2e-14 83.6 134 48.5
Ciclev10022896m.g Citrus clementina HOM05D007617 ORTHO05D007195 1.6e-14 83.2 130 45.4
PGR142G0897 Punica granatum HOM05D007617 ORTHO05D007195 1.6e-14 83.2 131 46.6
Sopen02g017030 Solanum pennellii HOM05D007617 ORTHO05D007195 1.6e-14 83.2 128 45.3
Nitab4.5_0000040g0620 Nicotiana tabacum HOM05D007617 ORTHO05D007195 2.7e-14 82.4 133 44.4
FAN18G3066 Fragaria x ananassa HOM05D007617 ORTHO05D007195 3.5e-14 82.0 134 47.8
Solyc02g067910.1 Solanum lycopersicum HOM05D007617 ORTHO05D007195 3.5e-14 82.0 130 45.4
TAR371G0337 Trochodendron aralioides HOM05D007617 ORTHO05D007195 3.5e-14 82.0 138 42.0
Phvul.004G059700 Phaseolus vulgaris HOM05D007617 ORTHO05D007195 6.0e-14 81.3 131 45.0
Atru.chr6.2453 Acer truncatum HOM05D007617 ORTHO05D007195 7.9e-14 80.9 136 44.1
Lsat_1_v5_gn_2_94241 Lactuca sativa HOM05D007617 ORTHO05D007195 1.0e-13 80.5 135 47.4
Sed0018064 Sechium edule HOM05D007617 ORTHO05D007195 1.0e-13 80.5 134 43.3
TAR374G0075 Trochodendron aralioides HOM05D007617 ORTHO05D007195 1.0e-13 80.5 141 44.7
Aqoxy5G03650 Aquilegia oxysepala HOM05D007617 ORTHO05D007195 1.3e-13 80.1 142 42.3
Sed0015223 Sechium edule HOM05D007617 ORTHO05D007195 1.3e-13 80.1 131 43.5
Lsat_1_v5_gn_2_91001 Lactuca sativa HOM05D007617 ORTHO05D007195 2.3e-13 79.3 140 47.9
CAN.G1057.14 Capsicum annuum HOM05D007617 ORTHO05D007195 3.0e-13 79.0 136 46.3
Ca_11155_v3 Cicer arietinum L. HOM05D007617 ORTHO05D007195 3.0e-13 79.0 132 44.7
Ca_11158_v3 Cicer arietinum L. HOM05D007617 ORTHO05D007195 3.0e-13 79.0 132 44.7
Potri.012G090700 Populus trichocarpa HOM05D007617 ORTHO05D007195 3.0e-13 79.0 145 40.7
CANSAT64G0294 Cannabis sativa HOM05D007617 ORTHO05D007195 5.1e-13 78.2 140 41.4
Lj2g0010313 Lotus japonicus HOM05D007617 ORTHO05D007195 6.6e-13 77.8 133 45.1
Sopen02g038090 Solanum pennellii HOM05D007617 ORTHO05D007195 6.6e-13 77.8 151 43.0
FAN13G2538 Fragaria x ananassa HOM05D007617 ORTHO05D007195 8.7e-13 77.4 132 47.0
Manes.14G057300 Manihot esculenta HOM05D007617 ORTHO05D007195 8.7e-13 77.4 140 41.4
VMungo0464G0279 Vigna mungo HOM05D007617 ORTHO05D007195 8.7e-13 77.4 129 45.7
EL10As2g23175 Beta vulgaris HOM05D007617 ORTHO05D007195 1.1e-12 77.0 126 42.9
PGSC0003DMG400012616 Solanum tuberosum HOM05D007617 ORTHO05D007195 1.5e-12 76.6 143 44.8
Glyma.19G053100 Glycine max HOM05D007617 ORTHO05D007195 1.9e-12 76.3 128 45.3
CiPaw.03G047400 Carya illinoinensis HOM05D007617 ORTHO05D007195 2.5e-12 75.9 130 43.1
CiPaw.09G026700 Carya illinoinensis HOM05D007617 ORTHO05D007195 2.5e-12 75.9 130 43.1
Haze_14778 Corylus avellana HOM05D007617 ORTHO05D007195 2.5e-12 75.9 124 41.9
FAN04G0785 Fragaria x ananassa HOM05D007617 ORTHO05D007195 2.5e-12 75.9 132 46.2
Atru.chr9.1807 Acer truncatum HOM05D007617 ORTHO05D007195 3.3e-12 75.5 130 43.1
Oeu054643.1 Olea europaea HOM05D007617 ORTHO05D007195 3.3e-12 75.5 134 45.5
Cfa007314 Carpinus fangiana HOM05D000615 ORTHO05D007195 4.3e-12 75.1 133 43.6
Oeu050454.1 Olea europaea HOM05D007617 ORTHO05D007195 4.3e-12 75.1 135 43.0
Cc07_g00130 Coffea canephora HOM05D007617 ORTHO05D007195 1.6e-11 73.2 132 43.9
PGSC0003DMG400006919 Solanum tuberosum HOM05D007617 ORTHO05D007195 2.1e-11 72.8 131 42.0
Thecc.03G118700 Theobroma cacao HOM05D011792 ORTHO05D007195 2.1e-11 72.8 146 41.8
MD14G1167200 Malus domestica HOM05D007617 ORTHO05D007195 3.6e-11 72.0 124 38.7
MD02G1049300 Malus domestica HOM05D007617 ORTHO05D007195 4.8e-11 71.6 136 41.9
TWI39G0914 Tripterygium wilfordii HOM05D007617 ORTHO05D007195 4.8e-11 71.6 133 45.1
MSTRG.15542 Avicennia marina HOM05D007617 ORTHO05D007195 6.2e-11 71.2 135 43.7
QL10p005918 Quercus lobata HOM05D007617 ORTHO05D007195 6.2e-11 71.2 139 39.6
MELO3C014838.2 Cucumis melo HOM05D007617 ORTHO05D007195 8.1e-11 70.9 136 38.2
Prupe.5G161500 Prunus persica HOM05D007617 ORTHO05D007195 8.1e-11 70.9 137 38.7
Migut.K00629 Erythranthe guttata HOM05D007617 ORTHO05D007195 1.1e-10 70.5 132 41.7
Nn4g22527 Nelumbo nucifera HOM05D007617 ORTHO05D007195 1.4e-10 70.1 143 41.3
Oeu023836.1 Olea europaea HOM05D007617 ORTHO05D007195 2.4e-10 69.3 161 38.5
TAR622G0315 Trochodendron aralioides HOM05D007617 ORTHO05D007195 3.1e-10 68.9 141 36.2
TWI23G0333 Tripterygium wilfordii HOM05D007617 ORTHO05D007195 4.0e-10 68.6 133 44.4
CsaV3_3G027400 Cucumis sativus L. HOM05D007617 ORTHO05D007195 5.3e-10 68.2 136 38.2
Manes.06G112400 Manihot esculenta HOM05D007617 ORTHO05D007195 6.9e-10 67.8 145 42.8
Nitab4.5_0014774g0010 Nicotiana tabacum HOM05D007617 ORTHO05D007195 6.9e-10 67.8 131 41.2
CANSAT80G0013 Cannabis sativa HOM05D007617 ORTHO05D007195 9.0e-10 67.4 135 40.0
SGA_v2.0_scaffold47G17524 Striga asiatica HOM05D007617 ORTHO05D007195 2.6e-09 65.9 126 41.3
ATR1145G009 Amborella trichopoda HOM05D007617 ORTHO05D007195 3.4e-09 65.5 133 41.4
CiPaw.11G014400 Carya illinoinensis HOM05D007617 ORTHO05D007195 4.5e-09 65.1 143 42.0
Gohir.A07G055100 Gossypium hirsutum HOM05D011792 ORTHO05D007195 4.5e-09 65.1 143 39.2
Gohir.D07G059400 Gossypium hirsutum HOM05D011792 ORTHO05D007195 5.8e-09 64.7 145 40.0
Gorai.001G062900 Gossypium raimondii HOM05D011792 ORTHO05D007195 1.7e-08 63.2 145 39.3
Lj7P603T33 Lonicera japonica HOM05D007617 ORTHO05D007195 2.9e-08 62.4 128 39.1
Haze_07632 Corylus avellana HOM05D007617 ORTHO05D007195 3.8e-08 62.0 144 38.2
BraA06t25018Z Brassica rapa HOM05D010525 ORTHO05D007195 4.9e-08 61.6 127 38.6
Nn3g16639 Nelumbo nucifera HOM05D007617 ORTHO05D007195 8.4e-08 60.8 140 38.6
Duzib205G1108 Durio zibethinus HOM05D011792 ORTHO05D007195 1.1e-07 60.5 147 37.4
A06p19360 Brassica napus HOM05D010525 ORTHO05D007195 1.4e-07 60.1 131 39.7
Hund06047 Selenicereus undatus HOM05D007617 ORTHO05D007195 1.9e-07 59.7 133 37.6
MSTRG.549 Avicennia marina HOM05D007617 ORTHO05D007195 2.4e-07 59.3 146 37.7
SGA_v2.0_scaffold30G12404 Striga asiatica HOM05D007617 ORTHO05D007195 3.2e-07 58.9 127 35.4
Sp5g13710 Schrenkiella parvula HOM05D010525 ORTHO05D007195 4.2e-07 58.5 147 38.1
AL5G27740 Arabidopsis lyrata HOM05D010525 ORTHO05D007195 7.1e-07 57.8 141 36.9
BcaC07g39315 Brassica carinata HOM05D010525 ORTHO05D007195 7.1e-07 57.8 131 35.9
C08p23300 Brassica napus HOM05D010525 ORTHO05D007195 7.1e-07 57.8 131 35.9
BolC8t49961H Brassica oleracea HOM05D010525 ORTHO05D007195 7.1e-07 57.8 131 35.9
Lsat_1_v5_gn_3_30061 Lactuca sativa HOM05D007617 ORTHO05D007195 9.3e-07 57.4 131 38.9
BcaB01g00826 Brassica carinata HOM05D010525 ORTHO05D007195 2.7e-06 55.8 145 35.2
Thhalv10010898m.g Eutrema salsugineum HOM05D010525 ORTHO05D007195 2.7e-06 55.8 144 36.8
Os03g0670000 Oryza sativa ssp. japonica HOM05D007617 ORTHO05D007195 3.5e-06 55.5 115 43.5
Manes.15G153500 Manihot esculenta HOM05D007617 ORTHO05D007195 6.0e-06 54.7 140 37.1
Aa31LG1G18820 Aethionema arabicum HOM05D010525 ORTHO05D007195 7.9e-06 54.3 137 36.5


User provided reference genes

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