Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro16762 Vaccinium macrocarpon HOM05D005248 ORTHO05D006409 2.7e-94 348.6 167 100.0
Dinv13708 Davidia involucrata HOM05D005248 ORTHO05D006409 3.9e-61 238.4 154 76.6
Cc04_g05750 Coffea canephora HOM05D005248 ORTHO05D006409 4.3e-60 235.0 154 73.4
CSS0031400 Camellia sinensis var. sinensis HOM05D005248 ORTHO05D006409 7.4e-60 234.2 154 74.0
CSS0027803 Camellia sinensis var. sinensis HOM05D005248 ORTHO05D006409 1.6e-59 233.0 157 72.0
Hma1.2p1_0452F.1_g155900 Hydrangea macrophylla HOM05D005248 ORTHO05D006409 4.8e-59 231.5 154 72.1
Oeu017204.1 Olea europaea HOM05D005248 ORTHO05D006409 5.3e-58 228.0 157 70.1
Oeu051184.1 Olea europaea HOM05D005248 ORTHO05D006409 9.0e-58 227.3 157 70.7
MSTRG.22815 Avicennia marina HOM05D005248 ORTHO05D006409 2.0e-57 226.1 157 72.0
Actinidia25510 Actinidia chinensis HOM05D005248 ORTHO05D006409 2.6e-57 225.7 155 71.0
Thecc.03G142000 Theobroma cacao HOM05D005248 ORTHO05D006409 9.9e-57 223.8 161 69.6
PGSC0003DMG400014171 Solanum tuberosum HOM05D005248 ORTHO05D006409 1.3e-56 223.4 157 70.1
SGA_v2.0_scaffold44G16640 Striga asiatica HOM05D005248 ORTHO05D006409 1.3e-56 223.4 157 72.0
Rhsim08G0198900 Rhododendron simsii HOM05D005248 ORTHO05D006409 1.7e-56 223.0 154 70.1
CAN.G1008.49 Capsicum annuum HOM05D005248 ORTHO05D006409 3.8e-56 221.9 157 70.7
GSVIVG01005682001 Vitis vinifera HOM05D005248 ORTHO05D006409 3.8e-56 221.9 142 76.1
Cfa018696 Carpinus fangiana HOM05D005248 ORTHO05D006409 8.4e-56 220.7 153 70.6
COL.COLO4_37271 Corchorus olitorius HOM05D005248 ORTHO05D006409 8.4e-56 220.7 158 70.9
QL10p000295 Quercus lobata HOM05D005248 ORTHO05D006409 8.4e-56 220.7 147 71.4
SalBow1G4990 Salvia bowleyana HOM05D005248 ORTHO05D006409 8.4e-56 220.7 157 69.4
Sopen03g037010 Solanum pennellii HOM05D005248 ORTHO05D006409 8.4e-56 220.7 157 69.4
Duzib205G1954 Durio zibethinus HOM05D005248 ORTHO05D006409 1.1e-55 220.3 158 70.3
Gohir.A07G046300 Gossypium hirsutum HOM05D005248 ORTHO05D006409 3.2e-55 218.8 158 68.4
Gohir.D07G050600 Gossypium hirsutum HOM05D005248 ORTHO05D006409 3.2e-55 218.8 158 68.4
Gorai.001G053700 Gossypium raimondii HOM05D005248 ORTHO05D006409 3.2e-55 218.8 158 68.4
Nitab4.5_0000976g0180 Nicotiana tabacum HOM05D005248 ORTHO05D006409 5.5e-55 218.0 157 69.4
ECA247G0315 Erigeron canadensis HOM05D005248 ORTHO05D000263 7.1e-55 217.6 157 69.4
TAR371G0926 Trochodendron aralioides HOM05D005248 ORTHO05D006409 9.3e-55 217.2 154 69.5
Ciclev10032866m.g Citrus clementina HOM05D005248 ORTHO05D006409 1.2e-54 216.9 142 73.2
MD14G1145800 Malus domestica HOM05D005248 ORTHO05D006409 1.2e-54 216.9 167 65.9
Prupe.5G140100 Prunus persica HOM05D005248 ORTHO05D006409 1.2e-54 216.9 142 74.6
SGA_v2.0_scaffold37G14670 Striga asiatica HOM05D005248 ORTHO05D006409 2.7e-54 215.7 157 69.4
HanXRQChr02g0034361 Helianthus annuus HOM05D005248 ORTHO05D006409 3.5e-54 215.3 168 66.7
vmacro19110 Vaccinium macrocarpon HOM05D005248 ORTHO05D006409 3.5e-54 215.3 185 60.0
Cpa.g.sc13.186 Carica papaya HOM05D005248 ORTHO05D006409 1.8e-53 213.0 152 70.4
MELO3C008773.2 Cucumis melo HOM05D005248 ORTHO05D006409 5.1e-53 211.5 145 68.3
Lj5A86T66 Lonicera japonica HOM05D005248 ORTHO05D006409 5.1e-53 211.5 159 65.4
Atru.chr10.902 Acer truncatum HOM05D005248 ORTHO05D006409 8.7e-53 210.7 170 63.5
CsaV3_2G009360 Cucumis sativus L. HOM05D005248 ORTHO05D006409 8.7e-53 210.7 145 67.6
CANSAT78G1265 Cannabis sativa HOM05D005248 ORTHO05D006409 1.9e-52 209.5 150 68.7
Atru.chr6.1938 Acer truncatum HOM05D005248 ORTHO05D006409 2.5e-52 209.1 195 58.5
MD06G1128800 Malus domestica HOM05D005248 ORTHO05D006409 2.5e-52 209.1 167 64.7
RcHm_v2.0_Chr7g0188501 Rosa chinensis HOM05D005248 ORTHO05D006409 2.5e-52 209.1 156 67.9
TWI39G0330 Tripterygium wilfordii HOM05D005248 ORTHO05D006409 3.3e-52 208.8 161 64.0
Sed0027310 Sechium edule HOM05D005248 ORTHO05D006409 7.4e-52 207.6 150 67.3
Nitab4.5_0012624g0030 Nicotiana tabacum HOM05D005248 ORTHO05D006409 1.3e-51 206.8 157 66.2
Glyma.04G202600 Glycine max HOM05D005248 ORTHO05D006409 1.6e-51 206.5 144 67.4
Lsat_1_v5_gn_1_30140 Lactuca sativa HOM05D005248 ORTHO05D006409 1.6e-51 206.5 155 67.7
Peaxi162Scf00314g00750 Petunia axillaris HOM05D005248 ORTHO05D006409 2.8e-51 205.7 152 66.4
THA.LOC104825042 Tarenaya hassleriana HOM05D005248 ORTHO05D006409 2.8e-51 205.7 151 66.2
vmacro19116 Vaccinium macrocarpon HOM05D000402 ORTHO05D000263 3.7e-51 205.3 203 54.2
Aqoxy4G00470 Aquilegia oxysepala HOM05D005248 ORTHO05D006409 4.8e-51 204.9 148 66.2
ClCG11G000550 Citrullus lanatus HOM05D005248 ORTHO05D006409 4.8e-51 204.9 147 66.7
FAN13G2612 Fragaria x ananassa HOM05D005248 ORTHO05D006409 6.2e-51 204.5 142 70.4
FAN08G1048 Fragaria x ananassa HOM05D005248 ORTHO05D006409 8.2e-51 204.1 152 67.8
AT5G51040 Arabidopsis thaliana HOM05D005248 ORTHO05D006409 1.1e-50 203.8 151 65.6
arahy.Tifrunner.gnm1.ann1.1UQX8S Arachis hypogaea HOM05D005248 ORTHO05D006409 1.1e-50 203.8 165 60.0
arahy.Tifrunner.gnm1.ann1.4X1L65 Arachis hypogaea HOM05D005248 ORTHO05D006409 1.1e-50 203.8 158 61.4
Potri.015G108300 Populus trichocarpa HOM05D005248 ORTHO05D006409 1.1e-50 203.8 139 69.8
Sc14g0003150 Simmondsia chinensis HOM05D005248 ORTHO05D006409 1.1e-50 203.8 151 67.5
EL10Ac5g11271 Beta vulgaris HOM05D005248 ORTHO05D006409 3.1e-50 202.2 143 67.8
Migut.I00662 Erythranthe guttata HOM05D005248 ORTHO05D006409 3.1e-50 202.2 142 71.1
Sabra12G0080100 Salix brachista HOM05D005248 ORTHO05D006409 3.1e-50 202.2 148 66.2
FvH4_5g09730 Fragaria vesca HOM05D005248 ORTHO05D006409 4.0e-50 201.8 152 67.1
PSO063G1686 Papaver somniferum HOM05D005248 ORTHO05D006409 4.0e-50 201.8 156 66.0
PGR119G0545 Punica granatum HOM05D005248 ORTHO05D006409 4.0e-50 201.8 138 70.3
unitig_61.g26221 Utricularia gibba HOM05D005248 ORTHO05D006409 4.0e-50 201.8 160 62.5
Aqoxy5G00839 Aquilegia oxysepala HOM05D005248 ORTHO05D006409 5.3e-50 201.4 148 66.2
Hund10025 Selenicereus undatus HOM05D005248 ORTHO05D006409 5.3e-50 201.4 150 64.7
arahy.Tifrunner.gnm1.ann1.JK6BKQ Arachis hypogaea HOM05D005248 ORTHO05D006409 6.9e-50 201.1 149 64.4
Haze_07087 Corylus avellana HOM05D005248 ORTHO05D006409 9.0e-50 200.7 194 56.2
FAN04G2277 Fragaria x ananassa HOM05D005248 ORTHO05D006409 9.0e-50 200.7 142 69.0
FAN18G0065 Fragaria x ananassa HOM05D005248 ORTHO05D006409 9.0e-50 200.7 152 67.1
arahy.Tifrunner.gnm1.ann1.X29WZH Arachis hypogaea HOM05D005248 ORTHO05D006409 1.2e-49 200.3 165 59.4
VMungo0251G2692 Vigna mungo HOM05D005248 ORTHO05D006409 1.2e-49 200.3 154 65.6
AL8G25260 Arabidopsis lyrata HOM05D005248 ORTHO05D006409 1.5e-49 199.9 151 64.2
Carub.0008s1104 Capsella rubella HOM05D005248 ORTHO05D006409 2.0e-49 199.5 148 65.5
DCAR_025638 Daucus carota HOM05D005248 ORTHO05D006409 2.0e-49 199.5 163 62.6
Lj1g0011989 Lotus japonicus HOM05D005248 ORTHO05D006409 2.6e-49 199.1 159 62.3
A10p08030 Brassica napus HOM05D005248 ORTHO05D006409 4.5e-49 198.4 150 64.7
BraSC35t45996Z Brassica rapa HOM05D005248 ORTHO05D006409 4.5e-49 198.4 150 64.7
CARHR257090 Cardamine hirsuta HOM05D005248 ORTHO05D006409 5.8e-49 198.0 151 63.6
Glyma.06G162900 Glycine max HOM05D005248 ORTHO05D006409 7.6e-49 197.6 140 68.6
Lalb_Chr12g0202581 Lupinus albus HOM05D005248 ORTHO05D006409 7.6e-49 197.6 136 70.6
Medtr3g098480 Medicago truncatula HOM05D005248 ORTHO05D006409 7.6e-49 197.6 150 64.7
PSO782G4423 Papaver somniferum HOM05D005248 ORTHO05D006409 1.0e-48 197.2 156 64.7
Manes.14G043700 Manihot esculenta HOM05D005248 ORTHO05D006409 1.3e-48 196.8 154 65.6
Phvul.009G158800 Phaseolus vulgaris HOM05D005248 ORTHO05D006409 1.3e-48 196.8 159 61.6
Nn3g16250 Nelumbo nucifera HOM05D005248 ORTHO05D006409 2.2e-48 196.1 161 59.6
CDE06G0011 Ceratophyllum demersum HOM05D005248 ORTHO05D006409 3.8e-48 195.3 146 65.8
AUR62043379 Chenopodium quinoa HOM05D005248 ORTHO05D006409 3.8e-48 195.3 146 65.8
Eucgr.H01475 Eucalyptus grandis HOM05D005248 ORTHO05D006409 3.8e-48 195.3 157 61.8
Psat7g039840 Pisum sativum HOM05D005248 ORTHO05D006409 3.8e-48 195.3 142 66.9
BolC9t56844H Brassica oleracea HOM05D005248 ORTHO05D006409 4.9e-48 194.9 150 62.7
Sp6g13210 Schrenkiella parvula HOM05D005248 ORTHO05D006409 4.9e-48 194.9 151 62.9
A02p12520 Brassica napus HOM05D005248 ORTHO05D006409 6.5e-48 194.5 148 63.5
Aa31LG3G7530 Aethionema arabicum HOM05D005248 ORTHO05D006409 8.4e-48 194.1 166 61.4
AUR62032207 Chenopodium quinoa HOM05D005248 ORTHO05D006409 8.4e-48 194.1 146 65.8
AUR62043864 Chenopodium quinoa HOM05D005248 ORTHO05D006409 8.4e-48 194.1 146 65.1
Thhalv10014773m.g Eutrema salsugineum HOM05D005248 ORTHO05D006409 8.4e-48 194.1 150 64.0
BcaC03g14629 Brassica carinata HOM05D005248 ORTHO05D006409 4.2e-47 191.8 151 62.3
Ca_16820_v3 Cicer arietinum L. HOM05D000402 ORTHO05D000263 4.2e-47 191.8 141 66.0
Medtr8g096070 Medicago truncatula HOM05D005248 ORTHO05D006409 4.2e-47 191.8 141 64.5
Hund02516 Selenicereus undatus HOM05D005248 ORTHO05D006409 4.2e-47 191.8 137 67.2
BolC2t08204H Brassica oleracea HOM05D005248 ORTHO05D006409 5.5e-47 191.4 153 60.8
BraA02t06314Z Brassica rapa HOM05D005248 ORTHO05D006409 5.5e-47 191.4 155 61.9
C09p39650 Brassica napus HOM05D005248 ORTHO05D006409 9.3e-47 190.7 150 61.3
Zm00001eb198100 Zea mays HOM05D005248 ORTHO05D006409 9.3e-47 190.7 136 66.2
BcaB05g24022 Brassica carinata HOM05D005248 ORTHO05D006409 1.2e-46 190.3 151 62.3
Lj9C488G13 Lonicera japonica HOM05D005248 ORTHO05D006409 1.2e-46 190.3 113 76.1
Ah.11g047000 Amaranthus hybridus HOM05D005248 ORTHO05D006409 3.5e-46 188.7 146 63.0
Os11g0528300 Oryza sativa ssp. japonica HOM05D005248 ORTHO05D006409 1.9e-44 183.0 136 66.2
CSS0028005 Camellia sinensis var. sinensis HOM05D005248 ORTHO05D006409 2.5e-44 182.6 131 70.2
Glyma.08G007100 Glycine max HOM05D005248 ORTHO05D006409 9.7e-44 180.6 154 58.4
HPP92_006440 Vanilla planifolia HOM05D005248 ORTHO05D006409 9.7e-44 180.6 162 58.6
Nitab4.5_0010893g0020 Nicotiana tabacum HOM05D005248 ORTHO05D006409 4.8e-43 178.3 130 70.0
Sabra15G0130900 Salix brachista HOM05D001551 ORTHO05D000263 3.1e-42 175.6 204 47.1
CiPaw.12G000300 Carya illinoinensis HOM05D005248 ORTHO05D006409 6.9e-42 174.5 120 70.8
C02p20620 Brassica napus HOM05D005248 ORTHO05D006409 4.5e-41 171.8 111 68.5
PSO541G2841 Papaver somniferum HOM05D005248 ORTHO05D006409 2.2e-40 169.5 111 71.2
ATR0582G036 Amborella trichopoda HOM05D005248 ORTHO05D006409 6.5e-40 167.9 150 58.7
Sabra15G0128600 Salix brachista HOM05D005248 ORTHO05D006409 6.5e-40 167.9 228 42.5
Lsat_1_v5_gn_9_37901 Lactuca sativa HOM05D005248 ORTHO05D006409 5.5e-39 164.9 121 63.6
Gohir.A07G044532 Gossypium hirsutum HOM05D005248 ORTHO05D006409 1.1e-34 150.6 87 75.9
Rhsim12G0181600 Rhododendron simsii HOM05D005248 ORTHO05D006409 1.2e-33 147.1 114 65.8
SMO146G0118 Selaginella moellendorffii HOM05D005248 ORTHO05D006409 1.5e-33 146.7 112 59.8
Pp3c16_25170 Physcomitrium patens HOM05D005248 ORTHO05D006409 1.9e-31 139.8 148 45.9
Mapoly0022s0036 Marchantia polymorpha HOM05D005248 ORTHO05D006409 8.8e-29 131.0 131 50.4
Lj4g0025558 Lotus japonicus HOM05D005248 ORTHO05D006409 4.4e-28 128.6 138 55.1
Gohir.A11G038833 Gossypium hirsutum HOM05D005248 ORTHO05D006409 6.3e-27 124.8 86 67.4
PSO675G1946 Papaver somniferum HOM05D005248 ORTHO05D006409 1.4e-26 123.6 108 61.1
Nitab4.5_0002540g0030 Nicotiana tabacum HOM05D005248 ORTHO05D006409 6.9e-26 121.3 102 65.7
BcaC04g20744 Brassica carinata HOM05D005248 ORTHO05D006409 1.2e-25 120.6 73 71.2
Zm00001eb113310 Zea mays HOM05D005248 ORTHO05D006409 2.0e-25 119.8 79 65.8
TPR.G12753 Trifolium pratense HOM05D005248 ORTHO05D006409 3.4e-25 119.0 73 69.9
Cre12.g550750 Chlamydomonas reinhardtii HOM05D005248 ORTHO05D006409 3.2e-23 112.5 123 46.3
QL10p017282 Quercus lobata HOM05D005248 ORTHO05D006409 6.1e-22 108.2 65 69.2
PRCOL_00003706 Prasinoderma coloniale HOM05D005248 ORTHO05D006409 1.0e-16 90.9 108 38.9
CAN.G412.4 Capsicum annuum HOM05D005248 ORTHO05D006409 2.9e-16 89.4 67 65.7
TPR.G20580 Trifolium pratense HOM05D005248 ORTHO05D006409 1.1e-15 87.4 69 66.7
MCO01G238 Micromonas commoda HOM05D005248 ORTHO05D006409 4.2e-15 85.5 99 38.4
TPR.G21935 Trifolium pratense HOM05D005248 ORTHO05D006409 7.7e-09 64.7 35 77.1
Gorai.007G045300 Gossypium raimondii HOM05D005248 ORTHO05D006409 2.9e-08 62.8 65 58.5


User provided reference genes

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