Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro14872 Vaccinium macrocarpon HOM05D006249 ORTHO05D007643 6.4e-168 594.0 291 100.0
CSS0046504 Camellia sinensis var. sinensis HOM05D006249 ORTHO05D007643 1.8e-130 469.5 299 79.3
Rhsim01G0269700 Rhododendron simsii HOM05D006249 ORTHO05D007643 9.0e-130 467.2 303 76.9
Sopen09g027650 Solanum pennellii HOM05D006249 ORTHO05D007643 2.4e-122 442.6 293 71.7
CSS0032391 Camellia sinensis var. sinensis HOM05D006249 ORTHO05D007643 1.2e-121 440.3 280 79.6
Solyc09g065860.3 Solanum lycopersicum HOM05D006249 ORTHO05D007643 1.5e-121 439.9 293 71.7
GSVIVG01000723001 Vitis vinifera HOM05D006249 ORTHO05D007643 2.9e-120 435.6 295 71.5
CiPaw.03G257400 Carya illinoinensis HOM05D006249 ORTHO05D007643 3.2e-119 432.2 290 69.0
Peaxi162Scf00049g00209 Petunia axillaris HOM05D006249 ORTHO05D007643 2.1e-118 429.5 293 70.6
CAN.G1259.4 Capsicum annuum HOM05D006249 ORTHO05D007643 1.0e-117 427.2 293 70.0
COL.COLO4_06075 Corchorus olitorius HOM05D006249 ORTHO05D007643 1.8e-117 426.4 295 67.8
Cpa.g.sc52.92 Carica papaya HOM05D006249 ORTHO05D007643 2.3e-117 426.0 289 71.6
Potri.005G218700 Populus trichocarpa HOM05D006249 ORTHO05D007643 1.5e-116 423.3 291 70.8
Cc01_g18850 Coffea canephora HOM05D006249 ORTHO05D007643 5.7e-116 421.4 259 73.7
Manes.05G084500 Manihot esculenta HOM05D006249 ORTHO05D007643 9.7e-116 420.6 291 69.4
RcHm_v2.0_Chr6g0289561 Rosa chinensis HOM05D006249 ORTHO05D007643 2.2e-115 419.5 295 68.5
Dinv34569 Davidia involucrata HOM05D006249 ORTHO05D007643 3.7e-115 418.7 295 70.5
Ciclev10021257m.g Citrus clementina HOM05D006249 ORTHO05D007643 4.8e-115 418.3 257 75.1
Thecc.01G267400 Theobroma cacao HOM05D006249 ORTHO05D007643 8.2e-115 417.5 295 67.8
PGSC0003DMG400019301 Solanum tuberosum HOM05D006249 ORTHO05D007643 1.8e-114 416.4 249 77.9
FvH4_2g22511 Fragaria vesca HOM05D006249 ORTHO05D007643 2.4e-114 416.0 296 69.3
Eucgr.K03312 Eucalyptus grandis HOM05D006249 ORTHO05D007643 9.0e-114 414.1 274 71.2
Nitab4.5_0001556g0120 Nicotiana tabacum HOM05D006249 ORTHO05D007643 9.0e-114 414.1 293 69.3
QL12p042687 Quercus lobata HOM05D006249 ORTHO05D007643 9.0e-114 414.1 295 68.1
Haze_24532 Corylus avellana HOM05D006249 ORTHO05D007643 1.2e-113 413.7 294 67.3
ClCG01G001850 Citrullus lanatus HOM05D006249 ORTHO05D007643 3.4e-113 412.1 248 77.0
CsaV3_5G002000 Cucumis sativus L. HOM05D006249 ORTHO05D007643 3.4e-113 412.1 250 76.4
ECA248G0032 Erigeron canadensis HOM05D006249 ORTHO05D007643 4.5e-113 411.8 280 69.3
AT1G03030 Arabidopsis thaliana HOM05D006249 ORTHO05D007643 1.7e-112 409.8 250 74.4
Gohir.A11G127400 Gossypium hirsutum HOM05D006249 ORTHO05D007643 5.0e-112 408.3 294 65.3
BraA10t42442Z Brassica rapa HOM05D006249 ORTHO05D007643 1.1e-111 407.1 280 68.6
Gohir.D11G132800 Gossypium hirsutum HOM05D006249 ORTHO05D007643 1.1e-111 407.1 294 65.3
Sc17g0000990 Simmondsia chinensis HOM05D006249 ORTHO05D007643 1.1e-111 407.1 248 73.8
C05p01650 Brassica napus HOM05D006249 ORTHO05D007643 1.4e-111 406.8 251 74.5
Carub.0001s0216 Capsella rubella HOM05D006249 ORTHO05D007643 1.4e-111 406.8 250 73.2
MELO3C005753.2 Cucumis melo HOM05D006249 ORTHO05D007643 1.4e-111 406.8 250 76.0
A10p01650 Brassica napus HOM05D006249 ORTHO05D007643 3.2e-111 405.6 280 68.6
Gorai.007G142000 Gossypium raimondii HOM05D006249 ORTHO05D007643 4.2e-111 405.2 294 65.0
BcaC07g42289 Brassica carinata HOM05D006249 ORTHO05D007643 5.5e-111 404.8 250 74.4
BolC5t28944H Brassica oleracea HOM05D006249 ORTHO05D007643 5.5e-111 404.8 250 74.4
CANSAT01G0091 Cannabis sativa HOM05D006249 ORTHO05D007643 5.5e-111 404.8 249 73.5
CARHR002370 Cardamine hirsuta HOM05D006249 ORTHO05D007643 9.4e-111 404.1 283 67.1
Prupe.8G232100 Prunus persica HOM05D006249 ORTHO05D007643 1.2e-110 403.7 291 67.7
Migut.D00374 Erythranthe guttata HOM05D006249 ORTHO05D007643 1.6e-110 403.3 294 66.3
Lj2C1159G1 Lonicera japonica HOM05D006249 ORTHO05D007643 2.1e-110 402.9 295 67.5
PGR044G2488 Punica granatum HOM05D006249 ORTHO05D007643 2.1e-110 402.9 251 74.1
Thhalv10008317m.g Eutrema salsugineum HOM05D006249 ORTHO05D007643 4.6e-110 401.7 279 68.8
TAR362G0606 Trochodendron aralioides HOM05D006249 ORTHO05D007643 3.0e-109 399.1 296 68.2
Atru.chr5.1566 Acer truncatum HOM05D006249 ORTHO05D007643 6.7e-109 397.9 234 77.8
Atru.chr5.1568 Acer truncatum HOM05D006249 ORTHO05D007643 6.7e-109 397.9 234 77.8
Duzib138G0419 Durio zibethinus HOM05D006249 ORTHO05D007643 6.7e-109 397.9 290 65.5
Lsat_1_v5_gn_5_186740 Lactuca sativa HOM05D006249 ORTHO05D007643 6.7e-109 397.9 253 71.9
Aa31LG1G9510 Aethionema arabicum HOM05D006249 ORTHO05D007643 4.3e-108 395.2 250 71.2
SGA_v2.0_scaffold1G00558 Striga asiatica HOM05D004045 ORTHO05D004923 5.7e-108 394.8 256 72.3
Hund09572 Selenicereus undatus HOM05D006249 ORTHO05D007643 1.3e-107 393.7 290 64.8
THA.LOC104801257 Tarenaya hassleriana HOM05D006249 ORTHO05D007643 3.7e-107 392.1 253 71.1
Lj1g0022179 Lotus japonicus HOM05D006249 ORTHO05D007643 1.8e-106 389.8 278 66.2
Oeu018173.1 Olea europaea HOM05D006249 ORTHO05D007643 1.8e-106 389.8 269 69.9
HanXRQChr01g0006841 Helianthus annuus HOM05D006249 ORTHO05D007643 2.4e-106 389.4 273 66.7
AL1G12480 Arabidopsis lyrata HOM05D006249 ORTHO05D007643 1.5e-105 386.7 234 75.2
Nitab4.5_0000187g0200 Nicotiana tabacum HOM05D006249 ORTHO05D007643 2.0e-105 386.3 232 78.4
MD05G1205700 Malus domestica HOM05D006249 ORTHO05D007643 3.4e-105 385.6 252 72.6
AUR62011941 Chenopodium quinoa HOM05D006249 ORTHO05D007643 3.8e-104 382.1 285 64.9
FAN15G1994 Fragaria x ananassa HOM05D004045 ORTHO05D004923 1.1e-103 380.6 256 70.7
FAN15G3229 Fragaria x ananassa HOM05D004045 ORTHO05D004923 1.1e-103 380.6 256 70.7
SalBow4G2323 Salvia bowleyana HOM05D006249 ORTHO05D007643 1.9e-103 379.8 250 71.6
Psat3g061040 Pisum sativum HOM05D006249 ORTHO05D007643 5.5e-103 378.3 282 63.5
MBI04_g06851_MAGBIO Magnolia biondii HOM05D006249 ORTHO05D007643 7.2e-103 377.9 327 59.0
Medtr7g096100 Medicago truncatula HOM05D006249 ORTHO05D007643 9.4e-103 377.5 289 61.9
MSTRG.21512 Avicennia marina HOM05D006249 ORTHO05D007643 2.1e-102 376.3 262 68.7
Glyma.19G161200 Glycine max HOM05D006249 ORTHO05D007643 4.7e-102 375.2 276 64.1
Aqoxy2G03531 Aquilegia oxysepala HOM05D006249 ORTHO05D007643 1.0e-101 374.0 265 69.4
TPR.G5717 Trifolium pratense HOM05D006249 ORTHO05D007643 1.8e-101 373.2 251 68.1
Nn1g02571 Nelumbo nucifera HOM05D006249 ORTHO05D007643 3.0e-101 372.5 285 65.6
VMungo1383G3440 Vigna mungo HOM05D004045 ORTHO05D004923 7.4e-100 367.9 277 61.4
TWI18G0435 Tripterygium wilfordii HOM05D006249 ORTHO05D007643 1.2e-97 360.5 262 67.2
CDE06G0138 Ceratophyllum demersum HOM05D006249 ORTHO05D007643 3.5e-97 359.0 263 64.6
Sabra05G0167700 Salix brachista HOM05D005019 ORTHO05D006625 1.3e-96 357.1 284 64.8
arahy.Tifrunner.gnm1.ann1.EN4NAA Arachis hypogaea HOM05D006249 ORTHO05D007643 1.7e-96 356.7 251 65.7
PSO832G1981 Papaver somniferum HOM05D006249 ORTHO05D007643 1.7e-96 356.7 209 76.1
arahy.Tifrunner.gnm1.ann1.3ZGG11 Arachis hypogaea HOM05D006249 ORTHO05D007643 3.8e-96 355.5 251 65.7
ATR0665G572 Amborella trichopoda HOM05D006249 ORTHO05D007643 8.5e-96 354.4 273 61.5
PSO210G4763 Papaver somniferum HOM05D006249 ORTHO05D007643 1.4e-95 353.6 209 75.6
Lalb_Chr25g0290111 Lupinus albus HOM05D006249 ORTHO05D007643 4.2e-95 352.1 254 64.6
BcaC07g42286 Brassica carinata HOM05D006249 ORTHO05D007643 3.9e-93 345.5 251 65.7
Os12g0601200 Oryza sativa ssp. japonica HOM05D006249 ORTHO05D007643 2.8e-91 339.3 253 62.5
Sed0010412 Sechium edule HOM05D006249 ORTHO05D007643 8.2e-91 337.8 210 73.8
HPP92_012490 Vanilla planifolia HOM05D006249 ORTHO05D007643 2.4e-90 336.3 254 61.4
Zm00001eb135540 Zea mays HOM05D006249 ORTHO05D007643 3.1e-90 335.9 250 62.4
Ah.02g111470 Amaranthus hybridus HOM05D006249 ORTHO05D007643 2.6e-84 316.2 281 55.9
Mapoly0096s0074 Marchantia polymorpha HOM05D006249 ORTHO05D007643 6.3e-83 311.6 248 60.1
AUR62032256 Chenopodium quinoa HOM05D006249 ORTHO05D007643 2.0e-81 306.6 251 60.6
Actinidia21156 Actinidia chinensis HOM05D006249 ORTHO05D007643 1.8e-77 293.5 264 58.0
BcaC07g42292 Brassica carinata HOM05D006249 ORTHO05D007643 2.3e-77 293.1 265 57.0
Pp3c17_16800 Physcomitrium patens HOM05D006249 ORTHO05D007643 8.3e-75 284.6 285 50.9
unitig_0.g1129 Utricularia gibba HOM05D006249 ORTHO05D007643 4.5e-73 278.9 194 68.6
Medtr4g076080 Medicago truncatula HOM05D006249 ORTHO05D007643 5.9e-73 278.5 238 57.6
Phvul.001G156700 Phaseolus vulgaris HOM05D006249 ORTHO05D007643 2.3e-72 276.6 219 59.8
EL10Ac5g10475 Beta vulgaris HOM05D006249 ORTHO05D007643 8.9e-69 264.6 151 76.8
SEGI_12640 Sequoiadendron giganteum HOM05D006249 ORTHO05D007643 9.2e-66 254.6 173 64.2
AagrBONN_evm.TU.Sc2ySwM_228.3891 Anthoceros agrestis HOM05D006249 ORTHO05D007643 3.5e-65 252.7 212 56.1
RcHm_v2.0_Chr4g0397901 Rosa chinensis HOM05D006249 ORTHO05D007643 1.5e-63 247.3 179 67.6
SMO358G0282 Selaginella moellendorffii HOM05D000331 ORTHO05D002018 1.9e-55 220.3 175 59.4
Cre02.g101000 Chlamydomonas reinhardtii HOM05D006249 ORTHO05D007643 1.4e-50 204.1 272 41.5
MCO14G208 Micromonas commoda HOM05D006249 ORTHO05D007643 4.4e-44 182.6 246 40.7
Oeu018171.1 Olea europaea HOM05D006249 ORTHO05D007643 6.0e-41 172.2 127 68.5
arahy.Tifrunner.gnm1.ann1.U7WVQR Arachis hypogaea HOM05D006249 ORTHO05D007643 1.3e-40 171.0 200 45.5
CBR_g19145 Chara braunii HOM05D006249 ORTHO05D007643 1.5e-39 167.5 158 53.2
Sp1g02020 Schrenkiella parvula HOM05D006249 ORTHO05D007643 7.6e-36 155.2 130 59.2
Hund30725 Selenicereus undatus HOM05D006249 ORTHO05D007643 6.6e-32 142.1 101 65.3
Medtr8g064430 Medicago truncatula HOM05D006249 ORTHO05D007643 2.1e-30 137.1 123 53.7
Ca_15970_v3 Cicer arietinum L. HOM05D006249 ORTHO05D007643 1.1e-29 134.8 116 53.4
Glyma.03G158766 Glycine max HOM05D006249 ORTHO05D007643 5.3e-29 132.5 94 66.0
Hund30696 Selenicereus undatus HOM05D006249 ORTHO05D007643 5.3e-29 132.5 100 62.0
Cfa022768 Carpinus fangiana HOM05D006249 ORTHO05D007643 6.0e-25 119.0 150 42.7
PRCOL_00003971 Prasinoderma coloniale HOM05D006249 ORTHO05D007643 1.3e-24 117.9 180 39.4
arahy.Tifrunner.gnm1.ann1.FBQK8B Arachis hypogaea HOM05D006249 ORTHO05D007643 6.6e-24 115.5 119 49.6
arahy.Tifrunner.gnm1.ann1.AHQ53Z Arachis hypogaea HOM05D006249 ORTHO05D007643 1.1e-23 114.8 121 49.6
Glyma.03G158832 Glycine max HOM05D006249 ORTHO05D007643 5.3e-21 105.9 63 73.0
CSS0005124 Camellia sinensis var. sinensis HOM05D006249 ORTHO05D007643 7.6e-20 102.1 58 77.6
SHI34902 Sapria himalayana HOM05D006249 ORTHO05D007643 1.3e-19 101.3 143 40.6
SHI29847 Sapria himalayana HOM05D006249 ORTHO05D007643 6.4e-19 99.0 135 40.0
SHI29011 Sapria himalayana HOM05D006249 ORTHO05D007643 1.3e-14 84.7 202 30.2
SHI16544 Sapria himalayana HOM05D006249 ORTHO05D007643 1.1e-10 71.6 118 36.4
SHI34501 Sapria himalayana HOM05D006249 ORTHO05D007643 1.9e-10 70.9 96 41.7
SHI04506 Sapria himalayana HOM05D006249 ORTHO05D007643 6.0e-09 65.9 121 31.4
SHI36882 Sapria himalayana HOM05D006249 ORTHO05D007643 6.0e-09 65.9 116 33.6
SHI31647 Sapria himalayana HOM05D006249 ORTHO05D007643 1.3e-08 64.7 61 49.2
SHI36883 Sapria himalayana HOM05D006249 ORTHO05D007643 1.3e-08 64.7 56 42.9
SHI49503 Sapria himalayana HOM05D000624 ORTHO05D000495 8.7e-08 62.0 50 60.0
SHI54291 Sapria himalayana HOM05D006249 ORTHO05D007643 1.1e-07 61.6 160 30.0
SEGI_29111 Sequoiadendron giganteum HOM05D006249 ORTHO05D007643 1.9e-07 60.8 41 61.0
SHI27267 Sapria himalayana HOM05D000624 ORTHO05D000495 2.1e-06 57.4 52 51.9
SHI41947 Sapria himalayana HOM05D000624 ORTHO05D000495 2.1e-06 57.4 50 56.0
SHI43714 Sapria himalayana HOM05D000624 ORTHO05D007643 2.8e-06 57.0 49 53.1
SHI45616 Sapria himalayana HOM05D000624 ORTHO05D000495 2.8e-06 57.0 50 56.0
SHI49364 Sapria himalayana HOM05D000624 ORTHO05D000495 3.7e-06 56.6 50 54.0


User provided reference genes

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