Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro10490 Vaccinium macrocarpon HOM05D000251 ORTHO05D034973 1.1e-153 546.6 271 100.0
Rhsim09G0116600 Rhododendron simsii HOM05D000251 ORTHO05D000414 2.3e-42 176.8 220 51.8
Actinidia01167 Actinidia chinensis HOM05D000251 ORTHO05D000414 1.4e-36 157.5 232 46.1
Rhsim12G0127200 Rhododendron simsii HOM05D000251 ORTHO05D000414 3.2e-36 156.4 232 45.7
Actinidia12284 Actinidia chinensis HOM05D000251 ORTHO05D000414 6.0e-35 152.1 232 45.3
CSS0047179 Camellia sinensis var. sinensis HOM05D000251 ORTHO05D000414 3.3e-33 146.4 235 43.8
CSS0033553 Camellia sinensis var. sinensis HOM05D000251 ORTHO05D000414 2.8e-32 143.3 232 41.8
vmacro16305 Vaccinium macrocarpon HOM05D000251 ORTHO05D000414 2.8e-32 143.3 232 42.2
MBI01_g13065_MAGBIO Magnolia biondii HOM05D000251 ORTHO05D000414 1.5e-30 137.5 228 42.1
Dinv24937 Davidia involucrata HOM05D000251 ORTHO05D000414 3.4e-30 136.3 223 42.2
TAR371G0379 Trochodendron aralioides HOM05D000251 ORTHO05D000414 8.3e-29 131.7 251 39.4
TAR622G0942 Trochodendron aralioides HOM05D000251 ORTHO05D000414 8.3e-29 131.7 251 39.4
Potri.008G191400 Populus trichocarpa HOM05D000251 ORTHO05D000414 2.4e-28 130.2 251 38.6
Nn4g22982 Nelumbo nucifera HOM05D000251 ORTHO05D000414 4.1e-28 129.4 221 40.7
Hma1.2p1_0289F.1_g114460 Hydrangea macrophylla HOM05D000251 ORTHO05D000414 7.1e-28 128.6 225 40.0
MBI04_g09740_MAGBIO Magnolia biondii HOM05D000251 ORTHO05D000414 7.1e-28 128.6 251 37.8
QL03p067986 Quercus lobata HOM05D000251 ORTHO05D000414 7.1e-28 128.6 250 38.4
Sabra08G0144900 Salix brachista HOM05D000251 ORTHO05D000414 9.2e-28 128.3 225 39.6
Ah.03g132050 Amaranthus hybridus HOM05D000251 ORTHO05D000414 1.6e-27 127.5 222 39.2
Ah.02g131770 Amaranthus hybridus HOM05D000251 ORTHO05D000414 2.1e-27 127.1 223 39.0
Eucgr.B03390 Eucalyptus grandis HOM05D000251 ORTHO05D000414 2.1e-27 127.1 250 38.0
Nn3g17069 Nelumbo nucifera HOM05D000251 ORTHO05D000414 2.1e-27 127.1 251 39.0
Oeu011715.3 Olea europaea HOM05D000251 ORTHO05D000414 2.1e-27 127.1 224 39.3
CANSAT01G0365 Cannabis sativa HOM05D000251 ORTHO05D000414 2.7e-27 126.7 232 39.7
Oeu044544.2 Olea europaea HOM05D000251 ORTHO05D000414 3.5e-27 126.3 221 39.4
Lj3C1045G1 Lonicera japonica HOM05D000251 ORTHO05D000414 4.6e-27 125.9 252 38.9
PGR102G1101 Punica granatum HOM05D000251 ORTHO05D000414 4.6e-27 125.9 221 38.9
EL10Ac6g13113 Beta vulgaris HOM05D000251 ORTHO05D000414 7.8e-27 125.2 222 38.7
Sc14g0008460 Simmondsia chinensis HOM05D000251 ORTHO05D000414 7.8e-27 125.2 222 39.2
Sed0018316 Sechium edule HOM05D000251 ORTHO05D000414 1.0e-26 124.8 222 39.2
Migut.E00125 Erythranthe guttata HOM05D000251 ORTHO05D000414 1.3e-26 124.4 231 37.7
HanXRQChr08g0209121 Helianthus annuus HOM05D000251 ORTHO05D000414 1.7e-26 124.0 251 37.1
MD16G1082100 Malus domestica HOM05D000251 ORTHO05D000414 1.7e-26 124.0 225 38.7
TPR.G28077 Trifolium pratense HOM05D000251 ORTHO05D000414 1.7e-26 124.0 222 40.5
Aqoxy6G00042 Aquilegia oxysepala HOM05D000251 ORTHO05D000414 2.3e-26 123.6 251 37.1
Gohir.A01G142500 Gossypium hirsutum HOM05D000251 ORTHO05D000414 3.0e-26 123.2 222 40.5
Duzib251G0335 Durio zibethinus HOM05D000251 ORTHO05D000414 5.1e-26 122.5 222 40.1
CiPaw.06G078200 Carya illinoinensis HOM05D000251 ORTHO05D000414 6.6e-26 122.1 250 37.6
Gohir.D01G134400 Gossypium hirsutum HOM05D000251 ORTHO05D000414 6.6e-26 122.1 222 39.6
Thecc.02G236900 Theobroma cacao HOM05D000251 ORTHO05D000414 6.6e-26 122.1 232 39.2
ATR0001G022 Amborella trichopoda HOM05D000251 ORTHO05D000414 8.6e-26 121.7 251 36.3
CAN.G27.59 Capsicum annuum HOM05D000251 ORTHO05D000414 8.6e-26 121.7 251 36.7
Ca_04012_v3 Cicer arietinum L. HOM05D000251 ORTHO05D000414 8.6e-26 121.7 222 40.1
Gorai.002G166300 Gossypium raimondii HOM05D000251 ORTHO05D000414 8.6e-26 121.7 222 40.1
Manes.05G094400 Manihot esculenta HOM05D000251 ORTHO05D000414 8.6e-26 121.7 222 38.3
PSO832G1193 Papaver somniferum HOM05D000251 ORTHO05D000414 8.6e-26 121.7 222 38.7
Sabra10G0027100 Salix brachista HOM05D000251 ORTHO05D000414 8.6e-26 121.7 251 36.3
Aqoxy3G00843_Aqoxy3G00842 Aquilegia oxysepala HOM05D000251 ORTHO05D000414 1.1e-25 121.3 251 35.9
Gohir.D05G322600 Gossypium hirsutum HOM05D000251 ORTHO05D000414 1.1e-25 121.3 222 39.2
Gorai.009G346300 Gossypium raimondii HOM05D000251 ORTHO05D000414 1.1e-25 121.3 222 39.2
Potri.010G039900 Populus trichocarpa HOM05D000251 ORTHO05D000414 1.1e-25 121.3 251 37.1
Prupe.1G263700 Prunus persica HOM05D000251 ORTHO05D000414 1.1e-25 121.3 225 38.2
ClCG05G024830 Citrullus lanatus HOM05D000251 ORTHO05D000414 1.9e-25 120.6 222 38.7
Ciclev10030537m.g Citrus clementina HOM05D000251 ORTHO05D000414 2.5e-25 120.2 224 38.8
DCAR_024501 Daucus carota HOM05D000251 ORTHO05D000414 2.5e-25 120.2 253 35.6
PSO591G0323 Papaver somniferum HOM05D000251 ORTHO05D000414 2.5e-25 120.2 222 38.3
Sed0017384 Sechium edule HOM05D000251 ORTHO05D000414 2.5e-25 120.2 222 39.2
CsaV3_5G032080 Cucumis sativus L. HOM05D000251 ORTHO05D000414 3.3e-25 119.8 222 38.3
Manes.01G193500 Manihot esculenta HOM05D000251 ORTHO05D000414 3.3e-25 119.8 222 38.7
Nitab4.5_0002542g0030 Nicotiana tabacum HOM05D000251 ORTHO05D000414 3.3e-25 119.8 251 36.3
RcHm_v2.0_Chr4g0445071 Rosa chinensis HOM05D000251 ORTHO05D000414 4.3e-25 119.4 234 37.6
SEGI_15879 Sequoiadendron giganteum HOM05D000251 ORTHO05D000414 4.3e-25 119.4 269 35.7
Haze_12079 Corylus avellana HOM05D000251 ORTHO05D000414 7.3e-25 118.6 250 36.8
Medtr8g062150 Medicago truncatula HOM05D000251 ORTHO05D000414 7.3e-25 118.6 222 38.7
Cc11_g13840 Coffea canephora HOM05D000251 ORTHO05D000414 9.5e-25 118.2 221 38.0
Pp3c7_11320 Physcomitrium patens HOM05D000251 ORTHO05D000414 9.5e-25 118.2 250 34.0
MD13G1083400 Malus domestica HOM05D000251 ORTHO05D000414 1.2e-24 117.9 227 37.0
DCAR_026578 Daucus carota HOM05D000251 ORTHO05D000414 1.6e-24 117.5 224 37.5
PSO478G0650 Papaver somniferum HOM05D000251 ORTHO05D000414 1.6e-24 117.5 222 38.7
Peaxi162Scf00209g00943 Petunia axillaris HOM05D000251 ORTHO05D000414 1.6e-24 117.5 251 35.9
HanXRQChr12g0382441 Helianthus annuus HOM05D000251 ORTHO05D000414 2.1e-24 117.1 247 35.6
Lsat_1_v5_gn_8_162521 Lactuca sativa HOM05D000251 ORTHO05D000414 2.1e-24 117.1 252 35.3
AUR62026302 Chenopodium quinoa HOM05D000251 ORTHO05D000414 2.8e-24 116.7 226 37.2
Glyma.08G293900 Glycine max HOM05D000251 ORTHO05D000414 2.8e-24 116.7 222 37.4
Glyma.18G129200 Glycine max HOM05D000251 ORTHO05D000414 2.8e-24 116.7 222 37.4
SalBow8G1963 Salvia bowleyana HOM05D000251 ORTHO05D000414 2.8e-24 116.7 231 36.8
CBR_g40147 Chara braunii HOM05D000251 ORTHO05D000414 3.6e-24 116.3 205 40.5
ECA233G6095 Erigeron canadensis HOM05D000251 ORTHO05D000414 3.6e-24 116.3 252 35.7
PSO161G0044 Papaver somniferum HOM05D000251 ORTHO05D000414 3.6e-24 116.3 222 38.3
CAN.G939.1 Capsicum annuum HOM05D000251 ORTHO05D000414 4.7e-24 115.9 221 37.1
Atru.chr11.1892 Acer truncatum HOM05D000251 ORTHO05D000414 6.2e-24 115.5 185 41.1
MSTRG.13393 Avicennia marina HOM05D000251 ORTHO05D000414 6.2e-24 115.5 250 35.6
Lj2g0015231 Lotus japonicus HOM05D000251 ORTHO05D000414 6.2e-24 115.5 221 37.6
Lalb_Chr05g0230131 Lupinus albus HOM05D000251 ORTHO05D000414 6.2e-24 115.5 222 37.8
Nitab4.5_0002374g0010 Nicotiana tabacum HOM05D000251 ORTHO05D000414 6.2e-24 115.5 221 36.7
Peaxi162Scf00097g00028 Petunia axillaris HOM05D000251 ORTHO05D000414 6.2e-24 115.5 222 38.3
Solyc01g011100.2 Solanum lycopersicum HOM05D000251 ORTHO05D000414 6.2e-24 115.5 221 38.5
Sopen01g007030 Solanum pennellii HOM05D000251 ORTHO05D000414 6.2e-24 115.5 220 36.8
Lj4g0017500 Lotus japonicus HOM05D000251 ORTHO05D000414 1.4e-23 114.4 222 37.8
Nitab4.5_0002832g0030 Nicotiana tabacum HOM05D000251 ORTHO05D000414 1.4e-23 114.4 221 36.7
CDE03G0393 Ceratophyllum demersum HOM05D000251 ORTHO05D000414 3.1e-23 113.2 222 37.8
Ca_15206_v3 Cicer arietinum L. HOM05D000251 ORTHO05D000414 5.2e-23 112.5 223 38.6
Psat4g038760 Pisum sativum HOM05D000251 ORTHO05D000414 6.8e-23 112.1 223 36.8
Psat4g129440 Pisum sativum HOM05D000251 ORTHO05D000414 6.8e-23 112.1 222 36.9
VMungo0251G2792 Vigna mungo HOM05D000251 ORTHO05D000414 6.8e-23 112.1 222 36.9
Zm00001eb048220 Zea mays HOM05D000251 ORTHO05D000414 6.8e-23 112.1 224 37.1
arahy.Tifrunner.gnm1.ann1.ZF7GKY Arachis hypogaea HOM05D000251 ORTHO05D000414 8.9e-23 111.7 221 36.7
Lsat_1_v5_gn_4_8120 Lactuca sativa HOM05D000251 ORTHO05D000414 8.9e-23 111.7 252 33.7
HPP92_006112 Vanilla planifolia HOM05D000251 ORTHO05D000414 1.5e-22 110.9 221 38.0
Mapoly0020s0113 Marchantia polymorpha HOM05D000251 ORTHO05D000414 2.0e-22 110.5 222 34.2
SGA_v2.0_scaffold87G26989 Striga asiatica HOM05D000251 ORTHO05D000414 3.4e-22 109.8 221 36.7
Phvul.003G072200 Phaseolus vulgaris HOM05D000251 ORTHO05D000414 4.4e-22 109.4 222 36.5
unitig_22.g5539 Utricularia gibba HOM05D000251 ORTHO05D000414 4.4e-22 109.4 221 36.7
SMO367G0069 Selaginella moellendorffii HOM05D000251 ORTHO05D000414 5.8e-22 109.0 221 35.3
MSTRG.2368 Avicennia marina HOM05D000251 ORTHO05D000414 9.9e-22 108.2 221 36.2
ECA234G4847 Erigeron canadensis HOM05D000251 ORTHO05D000414 9.9e-22 108.2 247 34.0
Sopen05g002580 Solanum pennellii HOM05D000251 ORTHO05D000414 1.7e-21 107.5 251 34.7
Lalb_Chr09g0326651 Lupinus albus HOM05D000251 ORTHO05D000414 2.2e-21 107.1 221 36.2
Dinv31147 Davidia involucrata HOM05D000251 ORTHO05D000414 4.9e-21 105.9 224 36.6
Solyc05g006640.4 Solanum lycopersicum HOM05D000251 ORTHO05D000414 4.9e-21 105.9 251 34.7
FAN12G0026 Fragaria x ananassa HOM05D000251 ORTHO05D000414 4.2e-20 102.8 214 34.6
FAN17G2091 Fragaria x ananassa HOM05D000251 ORTHO05D000414 4.2e-20 102.8 214 34.6
FAN22G2089 Fragaria x ananassa HOM05D000251 ORTHO05D000414 4.2e-20 102.8 214 34.6
FAN07G0285 Fragaria x ananassa HOM05D000251 ORTHO05D000414 1.6e-19 100.9 214 34.6
TWI75G0944 Tripterygium wilfordii HOM05D000251 ORTHO05D000414 1.6e-19 100.9 251 32.3
Aa31LG1G4510 Aethionema arabicum HOM05D000251 ORTHO05D000414 2.7e-19 100.1 222 34.2
Hund25293 Selenicereus undatus HOM05D000251 ORTHO05D000414 2.7e-19 100.1 218 33.9
THA.LOC104823670 Tarenaya hassleriana HOM05D000251 ORTHO05D000414 2.7e-19 100.1 222 34.7
MELO3C012044.2 Cucumis melo HOM05D000251 ORTHO05D000414 3.5e-19 99.8 201 34.8
Hund05929 Selenicereus undatus HOM05D000251 ORTHO05D000414 3.5e-19 99.8 223 33.6
Zm00001eb223160 Zea mays HOM05D000251 ORTHO05D000414 7.8e-19 98.6 225 33.8
FvH4_4g35440 Fragaria vesca HOM05D000251 ORTHO05D000414 1.0e-18 98.2 237 33.8
Sp2g04750 Schrenkiella parvula HOM05D000251 ORTHO05D000414 1.7e-18 97.4 232 34.5
Thhalv10023222m.g Eutrema salsugineum HOM05D000251 ORTHO05D000414 3.0e-18 96.7 232 34.5
BcaC09g49456 Brassica carinata HOM05D000251 ORTHO05D000414 5.1e-18 95.9 232 33.6
A01p28860 Brassica napus HOM05D000251 ORTHO05D000414 5.1e-18 95.9 232 33.6
C01p36520 Brassica napus HOM05D000251 ORTHO05D000414 5.1e-18 95.9 232 33.6
BolC1t03613H Brassica oleracea HOM05D000251 ORTHO05D000414 5.1e-18 95.9 232 33.6
BraA01t03023Z Brassica rapa HOM05D000251 ORTHO05D000414 5.1e-18 95.9 232 33.6
AL2G16960 Arabidopsis lyrata HOM05D000251 ORTHO05D000414 8.7e-18 95.1 232 34.5
A09p65080 Brassica napus HOM05D000251 ORTHO05D000414 8.7e-18 95.1 222 33.3
C08p48920 Brassica napus HOM05D000251 ORTHO05D000414 8.7e-18 95.1 222 33.3
BolC8t52426H Brassica oleracea HOM05D000251 ORTHO05D000414 8.7e-18 95.1 222 33.3
BraA09t41852Z Brassica rapa HOM05D000251 ORTHO05D000414 8.7e-18 95.1 222 33.3
CARHR053270 Cardamine hirsuta HOM05D000251 ORTHO05D000414 8.7e-18 95.1 222 35.1
Nitab4.5_0000791g0020 Nicotiana tabacum HOM05D000251 ORTHO05D000414 8.7e-18 95.1 168 40.5
AT1G59820 Arabidopsis thaliana HOM05D000251 ORTHO05D000414 1.1e-17 94.7 232 34.1
BcaC02g10656 Brassica carinata HOM05D000251 ORTHO05D000414 1.1e-17 94.7 232 33.6
BcaC06g31795 Brassica carinata HOM05D000251 ORTHO05D000414 1.1e-17 94.7 232 33.6
C04p26310 Brassica napus HOM05D000251 ORTHO05D000414 1.1e-17 94.7 232 33.6
BolC4t24176H Brassica oleracea HOM05D000251 ORTHO05D000414 1.1e-17 94.7 232 33.6
Lj4A844G58 Lonicera japonica HOM05D000251 ORTHO05D000414 1.1e-17 94.7 260 31.9
TWI18G0625 Tripterygium wilfordii HOM05D000251 ORTHO05D000414 3.3e-17 93.2 249 32.5
BcaB04g20233 Brassica carinata HOM05D000251 ORTHO05D000414 4.3e-17 92.8 232 33.6
Carub.0001s0987 Capsella rubella HOM05D000251 ORTHO05D000414 4.3e-17 92.8 222 33.3
Carub.0002s0546 Capsella rubella HOM05D000251 ORTHO05D000414 4.3e-17 92.8 232 34.1
Thhalv10006587m.g Eutrema salsugineum HOM05D000251 ORTHO05D000414 4.3e-17 92.8 222 33.3
Sp1g09060 Schrenkiella parvula HOM05D000251 ORTHO05D000414 4.3e-17 92.8 222 33.3
CARHR010570 Cardamine hirsuta HOM05D000251 ORTHO05D000414 7.3e-17 92.0 222 32.4
TPR.G26748 Trifolium pratense HOM05D000251 ORTHO05D000414 9.6e-17 91.7 224 33.5
arahy.Tifrunner.gnm1.ann1.ZU4F6W Arachis hypogaea HOM05D000251 ORTHO05D000414 1.6e-16 90.9 201 33.3
THA.LOC104819727 Tarenaya hassleriana HOM05D000251 ORTHO05D000414 4.7e-16 89.4 222 32.4
Aa31LG2G10370 Aethionema arabicum HOM05D000251 ORTHO05D000414 6.2e-16 89.0 238 33.2
Medtr5g037210 Medicago truncatula HOM05D000251 ORTHO05D000414 1.1e-15 88.2 227 33.9
arahy.Tifrunner.gnm1.ann1.Q6CIEG Arachis hypogaea HOM05D000251 ORTHO05D000414 1.4e-15 87.8 221 32.1
BraA03t15664Z Brassica rapa HOM05D000251 ORTHO05D000414 8.4e-13 78.6 235 31.5
AUR62026497 Chenopodium quinoa HOM05D000251 ORTHO05D000414 8.4e-13 78.6 189 34.4
vmacro10491 Vaccinium macrocarpon HOM05D000251 ORTHO05D034973 1.2e-11 74.7 39 82.1
A03p66120 Brassica napus HOM05D000251 ORTHO05D000414 2.1e-11 73.9 235 30.2
PRCOL_00005664 Prasinoderma coloniale HOM05D000251 ORTHO05D000414 3.5e-11 73.2 145 34.5
DCAR_026588 Daucus carota HOM05D000251 ORTHO05D012723 4.3e-09 66.2 70 48.6
Mapoly0020s0104 Marchantia polymorpha HOM05D000251 ORTHO05D000414 3.1e-07 60.1 278 25.2
Migut.L01116 Erythranthe guttata HOM05D000251 ORTHO05D000414 5.3e-07 59.3 258 24.4
COL.COLO4_30685 Corchorus olitorius HOM05D000251 ORTHO05D000414 6.9e-07 58.9 169 30.8
Lsat_1_v5_gn_1_15280 Lactuca sativa HOM05D000251 ORTHO05D048350 6.9e-07 58.9 69 47.8
Lsat_1_v5_gn_4_21500 Lactuca sativa HOM05D000251 ORTHO05D048350 6.9e-07 58.9 74 47.3
Gohir.A05G320400 Gossypium hirsutum HOM05D000251 ORTHO05D000414 9.0e-07 58.5 145 33.1
PGSC0003DMG400007463 Solanum tuberosum HOM05D000251 ORTHO05D000414 9.0e-07 58.5 252 25.4
vmacro05144 Vaccinium macrocarpon HOM05D001994 ORTHO05D001954 1.5e-06 57.8 27 96.3
Oeu044397.1 Olea europaea HOM05D000251 ORTHO05D000414 2.0e-06 57.4 253 24.9
arahy.Tifrunner.gnm1.ann1.6U5XAJ Arachis hypogaea HOM05D000251 ORTHO05D000414 2.6e-06 57.0 172 30.2
Eucgr.F03149 Eucalyptus grandis HOM05D000251 ORTHO05D000414 2.6e-06 57.0 141 36.9
MELO3C028972.2 Cucumis melo HOM05D006821 ORTHO05D034973 4.5e-06 56.2 62 43.5
Lj3g0012665 Lotus japonicus HOM05D000251 ORTHO05D000414 5.8e-06 55.8 172 30.8
arahy.Tifrunner.gnm1.ann1.XT67P2 Arachis hypogaea HOM05D000251 ORTHO05D000414 7.6e-06 55.5 172 29.7
FAN02G4034 Fragaria x ananassa HOM05D000251 ORTHO05D000414 7.6e-06 55.5 169 31.4
FAN05G3734 Fragaria x ananassa HOM05D000251 ORTHO05D000414 7.6e-06 55.5 169 31.4
Migut.E00278 Erythranthe guttata HOM05D000251 ORTHO05D000414 9.9e-06 55.1 248 26.2
SGA_v2.0_scaffold63G21681 Striga asiatica HOM05D000251 ORTHO05D000414 9.9e-06 55.1 36 63.9


User provided reference genes

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