Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro10028 Vaccinium macrocarpon HOM05D007655 ORTHO05D009698 6.6e-105 384.8 325 100.0
Rhsim09G0178900 Rhododendron simsii HOM05D007655 ORTHO05D009698 2.6e-69 266.5 318 81.1
Lj1P959T25 Lonicera japonica HOM05D007655 ORTHO05D009698 2.8e-47 193.4 309 66.0
Cfa013933 Carpinus fangiana HOM05D007655 ORTHO05D009698 1.4e-43 181.0 333 45.6
Haze_22616 Corylus avellana HOM05D007655 ORTHO05D009698 3.2e-43 179.9 325 47.7
Hma1.2p1_0523F.1_g172110 Hydrangea macrophylla HOM05D007655 ORTHO05D009698 6.0e-42 175.6 327 49.5
TWI09G1069 Tripterygium wilfordii HOM05D007655 ORTHO05D009698 6.7e-41 172.2 327 62.1
Actinidia00669 Actinidia chinensis HOM05D007655 ORTHO05D009698 4.3e-40 169.5 312 36.9
Manes.09G163100 Manihot esculenta HOM05D004613 ORTHO05D006095 1.3e-39 167.9 329 51.1
RcHm_v2.0_Chr1g0370651 Rosa chinensis HOM05D007655 ORTHO05D009698 2.8e-39 166.8 327 61.5
QL08p063505 Quercus lobata HOM05D007655 ORTHO05D009698 8.2e-39 165.2 330 61.2
DCAR_029510 Daucus carota HOM05D007655 ORTHO05D009698 6.9e-38 162.2 288 37.5
Atru.chr12.88 Acer truncatum HOM05D007655 ORTHO05D009698 2.0e-37 160.6 330 40.6
Cc00_g02280 Coffea canephora HOM05D007655 ORTHO05D009698 5.0e-36 156.0 317 45.7
GSVIVG01032781001 Vitis vinifera HOM05D007655 ORTHO05D009698 1.1e-35 154.8 295 70.2
FvH4_7g24790 Fragaria vesca HOM05D007655 ORTHO05D009698 1.4e-35 154.5 330 51.8
PGSC0003DMG400027723 Solanum tuberosum HOM05D007655 ORTHO05D009698 4.2e-35 152.9 323 59.1
Cpa.g.sc19.153 Carica papaya HOM05D007655 ORTHO05D009698 9.3e-35 151.8 292 65.8
FAN06G4929 Fragaria x ananassa HOM05D007655 ORTHO05D009698 1.6e-34 151.0 333 51.1
Thecc.10G013100 Theobroma cacao HOM05D007655 ORTHO05D009698 1.6e-34 151.0 290 66.2
Nitab4.5_0006468g0020 Nicotiana tabacum HOM05D007655 ORTHO05D009698 2.1e-34 150.6 324 58.3
TAR131G0001 Trochodendron aralioides HOM05D007655 ORTHO05D009698 2.7e-34 150.2 310 63.2
TAR623G1347 Trochodendron aralioides HOM05D007655 ORTHO05D009698 2.7e-34 150.2 310 63.2
Nitab4.5_0002701g0030 Nicotiana tabacum HOM05D007655 ORTHO05D009698 3.6e-34 149.8 288 47.9
CiPaw.02G194200 Carya illinoinensis HOM05D007655 ORTHO05D009698 2.3e-33 147.1 332 46.4
Solyc03g095960.1 Solanum lycopersicum HOM05D007655 ORTHO05D009698 2.3e-33 147.1 288 61.8
CAN.G1161.24 Capsicum annuum HOM05D007655 ORTHO05D009698 3.0e-33 146.7 305 43.0
Sopen03g025960 Solanum pennellii HOM05D007655 ORTHO05D009698 3.0e-33 146.7 288 61.5
FAN10G0222 Fragaria x ananassa HOM05D007655 ORTHO05D009698 5.1e-33 146.0 330 53.0
COL.COLO4_06431 Corchorus olitorius HOM05D007655 ORTHO05D009698 2.2e-31 140.6 305 59.7
HanXRQChr09g0253251 Helianthus annuus HOM05D007655 ORTHO05D009698 2.8e-31 140.2 314 40.4
Gohir.A06G170600 Gossypium hirsutum HOM05D007655 ORTHO05D009698 1.1e-30 138.3 293 56.0
Ciclev10033792m.g Citrus clementina HOM05D007655 ORTHO05D000636 1.5e-29 134.4 258 67.1
Aqoxy3G03604 Aquilegia oxysepala HOM05D007655 ORTHO05D009698 2.6e-29 133.7 282 63.8
MSTRG.197 Avicennia marina HOM05D007655 ORTHO05D009698 7.7e-29 132.1 279 32.3
Gorai.N006800 Gossypium raimondii HOM05D007655 ORTHO05D009698 1.7e-28 131.0 338 57.4
Gohir.D06G178400 Gossypium hirsutum HOM05D007655 ORTHO05D009698 2.2e-28 130.6 338 57.1
Sc14g0002050 Simmondsia chinensis HOM05D007655 ORTHO05D009698 2.9e-28 130.2 294 56.8
Migut.F01479 Erythranthe guttata HOM05D007655 ORTHO05D009698 6.5e-28 129.0 285 59.6
Sopen03g025950 Solanum pennellii HOM05D007655 ORTHO05D009698 8.5e-28 128.6 275 61.1
Duzib106G0934 Durio zibethinus HOM05D007655 ORTHO05D009698 1.9e-27 127.5 331 63.1
CANSAT56G4119 Cannabis sativa HOM05D007655 ORTHO05D009698 9.4e-27 125.2 285 63.5
Oeu029071.1 Olea europaea HOM05D007655 ORTHO05D009698 1.2e-26 124.8 307 64.2
A09p48980 Brassica napus HOM05D007655 ORTHO05D009698 2.7e-26 123.6 302 47.4
BraA09t40353Z Brassica rapa HOM05D007655 ORTHO05D009698 2.7e-26 123.6 302 47.4
Aa31LG10G10970 Aethionema arabicum HOM05D007655 ORTHO05D009698 6.1e-26 122.5 308 57.5
Sp5g06510 Schrenkiella parvula HOM05D007655 ORTHO05D009698 6.1e-26 122.5 303 47.2
C08p31340 Brassica napus HOM05D007655 ORTHO05D009698 1.8e-25 120.9 282 48.6
BolC8t50755H Brassica oleracea HOM05D007655 ORTHO05D009698 1.8e-25 120.9 282 48.6
ECA232G4997 Erigeron canadensis HOM05D007655 ORTHO05D009698 1.8e-25 120.9 316 46.8
AT3G56030 Arabidopsis thaliana HOM05D007655 ORTHO05D009698 3.0e-25 120.2 308 39.3
AL5G37300 Arabidopsis lyrata HOM05D007655 ORTHO05D009698 1.5e-24 117.9 306 40.2
CARHR166100 Cardamine hirsuta HOM05D007655 ORTHO05D009698 3.3e-24 116.7 301 47.8
PGR044G0328 Punica granatum HOM05D007655 ORTHO05D009698 3.3e-24 116.7 294 45.2
Carub.0004s2246 Capsella rubella HOM05D007655 ORTHO05D009698 5.7e-24 115.9 290 60.7
AT2G40240 Arabidopsis thaliana HOM05D007655 ORTHO05D009698 9.7e-24 115.2 286 60.1
CARHR135280 Cardamine hirsuta HOM05D007655 ORTHO05D009698 9.7e-24 115.2 302 58.3
Ca_19338_v3 Cicer arietinum L. HOM05D007655 ORTHO05D009698 2.8e-23 113.6 313 36.1
Aa31LG5G19330 Aethionema arabicum HOM05D007655 ORTHO05D009698 3.7e-23 113.2 326 44.5
AL4G37960 Arabidopsis lyrata HOM05D007655 ORTHO05D009698 3.7e-23 113.2 290 59.3
Thhalv10006093m.g Eutrema salsugineum HOM05D007655 ORTHO05D009698 4.8e-23 112.8 303 49.2
Lsat_1_v5_gn_9_61061 Lactuca sativa HOM05D007655 ORTHO05D009698 8.2e-23 112.1 289 63.7
Carub.0005s2276 Capsella rubella HOM05D007655 ORTHO05D009698 1.1e-22 111.7 308 39.9
Lalb_Chr03g0033351 Lupinus albus HOM05D007655 ORTHO05D009698 2.4e-22 110.5 292 29.5
CSS0030670 Camellia sinensis var. sinensis HOM05D007655 ORTHO05D009698 4.1e-22 109.8 71 74.6
Phvul.004G132400 Phaseolus vulgaris HOM05D007655 ORTHO05D009698 9.1e-22 108.6 291 40.5
Psat1g113880 Pisum sativum HOM05D007655 ORTHO05D009698 1.5e-21 107.8 317 27.1
Peaxi162Scf00304g00006 Petunia axillaris HOM05D007655 ORTHO05D009698 2.0e-21 107.5 107 53.3
Glyma.09G157400 Glycine max HOM05D007655 ORTHO05D009698 2.6e-21 107.1 319 42.9
THA.LOC104810115 Tarenaya hassleriana HOM05D007655 ORTHO05D009698 2.6e-21 107.1 327 57.2
Lj2g0024512 Lotus japonicus HOM05D007655 ORTHO05D009698 1.3e-20 104.8 328 39.6
Medtr6g065100 Medicago truncatula HOM05D007655 ORTHO05D009698 5.0e-20 102.8 317 38.8
Haze_17251 Corylus avellana HOM05D007655 ORTHO05D009698 1.4e-19 101.3 106 51.9
SalBow5G5388 Salvia bowleyana HOM05D007655 ORTHO05D009698 1.9e-19 100.9 117 48.7
FAN03G2547 Fragaria x ananassa HOM05D007655 ORTHO05D009698 3.6e-18 96.7 323 48.0
TPR.G40357 Trifolium pratense HOM05D007655 ORTHO05D009698 1.0e-17 95.1 291 24.7
Ca_25253_v3 Cicer arietinum L. HOM05D007655 ORTHO05D009698 2.3e-17 94.0 278 31.7
MBI15_g28821_MAGBIO Magnolia biondii HOM05D007655 ORTHO05D009698 3.0e-17 93.6 312 43.6
VMungo0464G0151 Vigna mungo HOM05D007655 ORTHO05D009698 5.7e-16 89.4 305 41.6
arahy.Tifrunner.gnm1.ann1.L8T4NM Arachis hypogaea HOM05D007655 ORTHO05D009698 1.1e-14 85.1 91 49.5
CDE06G0331 Ceratophyllum demersum HOM05D007655 ORTHO05D009698 2.9e-12 77.0 283 53.7
Prupe.2G253200 Prunus persica HOM05D000815 ORTHO05D000636 6.5e-12 75.9 145 37.9
arahy.Tifrunner.gnm1.ann1.P4Y6YZ Arachis hypogaea HOM05D000585 ORTHO05D001841 1.1e-11 75.1 106 41.5
CDE12G0438 Ceratophyllum demersum HOM05D007655 ORTHO05D009698 1.5e-11 74.7 105 41.9
FAN01G0024 Fragaria x ananassa HOM05D007655 ORTHO05D009698 3.2e-11 73.6 77 53.2
ATR0174G045 Amborella trichopoda HOM05D007655 ORTHO05D009698 7.2e-11 72.4 114 37.7
Nn2g13207 Nelumbo nucifera HOM05D007655 ORTHO05D009698 2.7e-10 70.5 67 55.2
CDE04G2579 Ceratophyllum demersum HOM05D007655 ORTHO05D009698 4.7e-10 69.7 113 38.9
Potri.008G141700 Populus trichocarpa HOM05D007655 ORTHO05D009698 1.0e-09 68.6 52 59.6
Lalb_Chr19g0131421 Lupinus albus HOM05D007655 ORTHO05D009698 7.5e-08 62.4 67 43.3


User provided reference genes

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