Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro09689 Vaccinium macrocarpon HOM05D006019 ORTHO05D007900 5.1e-271 937.2 486 100.0
CSS0042888 Camellia sinensis var. sinensis HOM05D006019 ORTHO05D007900 4.1e-228 794.7 477 84.1
Actinidia35369 Actinidia chinensis HOM05D006019 ORTHO05D007900 1.0e-226 790.0 478 83.9
CSS0000535 Camellia sinensis var. sinensis HOM05D006019 ORTHO05D007900 1.7e-226 789.3 477 82.8
QL08p020269 Quercus lobata HOM05D006019 ORTHO05D007900 3.6e-216 755.0 485 78.4
GSVIVG01037722001 Vitis vinifera HOM05D006019 ORTHO05D007900 1.8e-215 752.7 469 78.3
Eucgr.F03504 Eucalyptus grandis HOM05D006019 ORTHO05D007900 3.1e-215 751.9 470 80.0
Atru.chr2.3529 Acer truncatum HOM05D006019 ORTHO05D007900 2.6e-214 748.8 471 80.5
Potri.015G065900 Populus trichocarpa HOM05D006019 ORTHO05D007900 3.4e-214 748.4 470 79.4
TAR629G1914 Trochodendron aralioides HOM05D006019 ORTHO05D007900 5.8e-214 747.7 470 79.1
Rhsim04G0016400 Rhododendron simsii HOM05D006019 ORTHO05D000403 9.8e-214 746.9 478 82.0
Dinv22232 Davidia involucrata HOM05D006019 ORTHO05D007900 1.1e-212 743.4 462 80.3
Atru.chr2.3549 Acer truncatum HOM05D006019 ORTHO05D007900 1.9e-212 742.7 471 79.8
CiPaw.11G172700 Carya illinoinensis HOM05D006019 ORTHO05D007900 1.9e-212 742.7 468 79.3
Sabra15G0091100 Salix brachista HOM05D006019 ORTHO05D007900 7.0e-212 740.7 470 78.3
Duzib213G0195 Durio zibethinus HOM05D006019 ORTHO05D007900 3.0e-210 735.3 479 77.2
Haze_09462 Corylus avellana HOM05D006019 ORTHO05D007900 1.5e-209 733.0 463 79.5
Manes.03G136600 Manihot esculenta HOM05D006019 ORTHO05D007900 5.6e-209 731.1 470 77.9
VMungo0647G0128 Vigna mungo HOM05D006019 ORTHO05D007900 1.1e-207 726.9 472 76.9
PGR031G3909 Punica granatum HOM05D006019 ORTHO05D007900 3.1e-207 725.3 469 76.8
Prupe.4G223000 Prunus persica HOM05D006019 ORTHO05D007900 5.2e-207 724.5 465 78.1
Nn1g07344 Nelumbo nucifera HOM05D006019 ORTHO05D007900 1.2e-206 723.4 475 75.8
Glyma.02G294900 Glycine max HOM05D006019 ORTHO05D007900 7.5e-206 720.7 471 75.8
Phvul.008G272400 Phaseolus vulgaris HOM05D006019 ORTHO05D007900 2.2e-205 719.2 472 75.6
MD11G1209500 Malus domestica HOM05D006019 ORTHO05D007900 2.9e-205 718.8 469 76.5
Thecc.07G028300 Theobroma cacao HOM05D006019 ORTHO05D007900 1.1e-204 716.8 473 75.9
Gorai.002G093600 Gossypium raimondii HOM05D006019 ORTHO05D007900 2.4e-204 715.7 473 75.7
LjContig00272g0018197 Lotus japonicus HOM05D006019 ORTHO05D007900 2.4e-204 715.7 471 76.4
Peaxi162Scf00235g00727 Petunia axillaris HOM05D006019 ORTHO05D007900 2.4e-204 715.7 472 74.8
ClCG10G005120 Citrullus lanatus HOM05D006019 ORTHO05D007900 4.1e-204 714.9 472 76.1
COL.COLO4_09733 Corchorus olitorius HOM05D006019 ORTHO05D007900 5.4e-204 714.5 471 75.6
CANSAT11G1049 Cannabis sativa HOM05D006019 ORTHO05D007900 7.1e-204 714.1 471 75.8
Ciclev10007944m.g Citrus clementina HOM05D006019 ORTHO05D007900 1.2e-203 713.4 471 76.4
MELO3C014178.2 Cucumis melo HOM05D006019 ORTHO05D007900 1.6e-203 713.0 471 76.4
Gohir.A01G084500 Gossypium hirsutum HOM05D006019 ORTHO05D007900 1.6e-203 713.0 469 76.3
Gohir.D01G070900 Gossypium hirsutum HOM05D006019 ORTHO05D007900 2.1e-203 712.6 473 75.3
CsaV3_3G004800 Cucumis sativus L. HOM05D006019 ORTHO05D007900 2.7e-203 712.2 469 76.5
FAN21G2609 Fragaria x ananassa HOM05D006019 ORTHO05D007900 7.8e-203 710.7 472 74.8
Glyma.14G018700 Glycine max HOM05D006019 ORTHO05D007900 1.0e-202 710.3 466 75.8
Cc05_g14300 Coffea canephora HOM05D006019 ORTHO05D007900 1.3e-202 709.9 482 72.6
Lalb_Chr04g0248161 Lupinus albus HOM05D006019 ORTHO05D007900 5.1e-202 708.0 471 74.1
PGSC0003DMG400022300 Solanum tuberosum HOM05D006019 ORTHO05D007900 1.9e-201 706.1 467 74.9
RcHm_v2.0_Chr5g0041541 Rosa chinensis HOM05D006019 ORTHO05D007900 1.6e-200 703.0 472 74.2
Cpa.g.sc284.5 Carica papaya HOM05D006019 ORTHO05D007900 2.1e-200 702.6 490 73.5
Oeu026379.1 Olea europaea HOM05D006019 ORTHO05D007900 2.1e-200 702.6 468 74.1
CAN.G337.58 Capsicum annuum HOM05D006019 ORTHO05D007900 2.8e-200 702.2 485 72.0
Sopen07g033150 Solanum pennellii HOM05D006019 ORTHO05D007900 8.1e-200 700.7 467 74.1
Sed0026759 Sechium edule HOM05D006019 ORTHO05D007900 1.4e-199 699.9 460 75.9
THA.LOC104817684 Tarenaya hassleriana HOM05D006019 ORTHO05D007900 1.4e-199 699.9 474 73.4
Solyc07g064950.3 Solanum lycopersicum HOM05D006019 ORTHO05D007900 4.0e-199 698.4 468 73.5
ECA240G2757 Erigeron canadensis HOM05D006019 ORTHO05D007900 2.0e-198 696.0 461 74.4
FAN25G1378 Fragaria x ananassa HOM05D006019 ORTHO05D007900 9.9e-198 693.7 472 73.7
Migut.M01708 Erythranthe guttata HOM05D006019 ORTHO05D007900 1.7e-197 693.0 471 74.5
Lsat_1_v5_gn_9_90660 Lactuca sativa HOM05D006019 ORTHO05D007900 2.2e-197 692.6 469 72.9
Medtr5g093830 Medicago truncatula HOM05D006019 ORTHO05D007900 2.9e-197 692.2 473 72.3
Nitab4.5_0000984g0040 Nicotiana tabacum HOM05D006019 ORTHO05D007900 2.9e-197 692.2 479 72.0
Nitab4.5_0002826g0040 Nicotiana tabacum HOM05D006019 ORTHO05D007900 1.9e-196 689.5 479 72.0
HanXRQChr13g0408251 Helianthus annuus HOM05D006019 ORTHO05D007900 4.1e-196 688.3 470 70.9
arahy.Tifrunner.gnm1.ann1.G2L6CM Arachis hypogaea HOM05D006019 ORTHO05D007900 7.8e-195 684.1 459 73.4
Lj1C880T10 Lonicera japonica HOM05D006019 ORTHO05D007900 1.0e-194 683.7 476 73.7
DCAR_017106 Daucus carota HOM05D006019 ORTHO05D007900 1.3e-194 683.3 443 76.3
TPR.G35353 Trifolium pratense HOM05D006019 ORTHO05D007900 8.6e-194 680.6 471 71.8
TWI39G1205 Tripterygium wilfordii HOM05D006019 ORTHO05D007900 3.3e-193 678.7 470 72.8
Ca_06346_v3 Cicer arietinum L. HOM05D006019 ORTHO05D007900 3.1e-191 672.2 440 74.8
AUR62020342 Chenopodium quinoa HOM05D006019 ORTHO05D007900 2.6e-190 669.1 471 69.2
MBI19_g29437_MAGBIO Magnolia biondii HOM05D006019 ORTHO05D007900 4.4e-190 668.3 469 72.5
FvH4_3g23540 Fragaria vesca HOM05D006019 ORTHO05D007900 5.8e-190 667.9 447 74.0
AL8G30770 Arabidopsis lyrata HOM05D006019 ORTHO05D007900 2.9e-189 665.6 485 69.1
Thhalv10013195m.g Eutrema salsugineum HOM05D006019 ORTHO05D007900 2.4e-188 662.5 474 69.2
BcaB05g22192 Brassica carinata HOM05D006019 ORTHO05D007900 2.1e-187 659.4 487 66.7
Aqoxy1G02863 Aquilegia oxysepala HOM05D006019 ORTHO05D007900 2.7e-187 659.1 471 71.1
AT5G55220 Arabidopsis thaliana HOM05D006019 ORTHO05D007900 2.7e-187 659.1 475 68.8
Carub.0008s1557 Capsella rubella HOM05D006019 ORTHO05D007900 1.3e-186 656.8 479 68.7
CARHR268580 Cardamine hirsuta HOM05D006019 ORTHO05D007900 1.3e-186 656.8 474 69.6
HanXRQChr03g0076861 Helianthus annuus HOM05D006019 ORTHO05D007900 6.6e-186 654.4 461 69.0
Psat2g009800 Pisum sativum HOM05D006019 ORTHO05D007900 6.6e-186 654.4 469 69.3
Sp6g17150 Schrenkiella parvula HOM05D006019 ORTHO05D007900 6.6e-186 654.4 472 69.1
EL10Ac4g07692 Beta vulgaris HOM05D006019 ORTHO05D007900 1.5e-185 653.3 502 65.3
Aa31LG3G11210 Aethionema arabicum HOM05D006019 ORTHO05D007900 2.8e-184 649.0 483 67.3
BolC2t07733H Brassica oleracea HOM05D006019 ORTHO05D007900 1.1e-183 647.1 485 67.0
BraA02t06043Z Brassica rapa HOM05D006019 ORTHO05D007900 4.0e-183 645.2 474 67.9
PSO541G6030 Papaver somniferum HOM05D006019 ORTHO05D007900 4.5e-182 641.7 480 67.9
arahy.Tifrunner.gnm1.ann1.PR9FWM Arachis hypogaea HOM05D006019 ORTHO05D007900 1.3e-181 640.2 459 69.5
PSO675G6628 Papaver somniferum HOM05D006019 ORTHO05D007900 4.9e-181 638.3 480 67.5
FAN16G2690 Fragaria x ananassa HOM05D006019 ORTHO05D007900 1.4e-180 636.7 472 68.6
AUR62015881 Chenopodium quinoa HOM05D006019 ORTHO05D007900 3.8e-173 612.1 483 63.8
C02p16310 Brassica napus HOM05D006019 ORTHO05D000403 1.4e-172 610.1 463 66.1
Ah.06g182250 Amaranthus hybridus HOM05D006019 ORTHO05D007900 4.2e-172 608.6 471 65.2
ATR1128G029 Amborella trichopoda HOM05D006019 ORTHO05D007900 4.2e-172 608.6 443 68.4
A02p09780 Brassica napus HOM05D006019 ORTHO05D000403 2.1e-171 606.3 448 67.2
Hund01957 Selenicereus undatus HOM05D006019 ORTHO05D007900 3.0e-170 602.4 473 65.8
BcaC03g14251 Brassica carinata HOM05D006019 ORTHO05D007900 1.1e-164 583.9 473 63.4
Os06g0308000 Oryza sativa ssp. japonica HOM05D006019 ORTHO05D007900 2.3e-162 576.2 471 62.4
Sc16g0005740 Simmondsia chinensis HOM05D006019 ORTHO05D007900 1.9e-156 556.6 406 71.9
Zm00001eb405570 Zea mays HOM05D006019 ORTHO05D007900 1.6e-155 553.5 453 60.3
SGA_v2.0_scaffold171G38908 Striga asiatica HOM05D006019 ORTHO05D007900 7.9e-155 551.2 487 60.4
unitig_22.g6170 Utricularia gibba HOM05D006019 ORTHO05D007900 1.3e-149 533.9 373 71.6
SalBow8G4839 Salvia bowleyana HOM05D006019 ORTHO05D007900 9.4e-148 527.7 472 59.5
BcaC03g14252 Brassica carinata HOM05D006019 ORTHO05D007900 5.2e-138 495.4 367 65.4
SEGI_28230 Sequoiadendron giganteum HOM05D006019 ORTHO05D007900 4.4e-137 492.3 469 51.2
CDE04G0522 Ceratophyllum demersum HOM05D006019 ORTHO05D007900 2.2e-133 479.9 342 68.7
FAN11G0939 Fragaria x ananassa HOM05D006019 ORTHO05D007900 3.0e-130 469.5 307 73.0
Pp3c2_30270 Physcomitrium patens HOM05D006019 ORTHO05D007900 3.3e-129 466.1 468 50.6
Pp3c11_10950 Physcomitrium patens HOM05D006019 ORTHO05D007900 1.2e-126 457.6 491 47.9
Mapoly0157s0020 Marchantia polymorpha HOM05D006019 ORTHO05D007900 2.2e-125 453.4 463 48.8
AagrBONN_evm.TU.Sc2ySwM_228.3732 Anthoceros agrestis HOM05D006019 ORTHO05D007900 2.7e-123 446.4 455 49.0
CBR_g21850 Chara braunii HOM05D006019 ORTHO05D007900 7.7e-118 428.3 472 47.9
FAN25G3210 Fragaria x ananassa HOM05D006019 ORTHO05D007900 1.2e-113 414.5 381 60.1
SMO361G0007 Selaginella moellendorffii HOM05D006019 ORTHO05D007900 1.0e-109 401.4 438 45.2
MCO13G367 Micromonas commoda HOM05D006019 ORTHO05D007900 4.3e-76 289.7 464 34.9
PRCOL_00002693 Prasinoderma coloniale HOM05D006019 ORTHO05D007900 1.5e-65 254.6 424 34.0
A10p12490 Brassica napus HOM05D006019 ORTHO05D007900 4.6e-54 216.5 383 41.3
VMungo0464G1494 Vigna mungo HOM05D006019 ORTHO05D007900 6.0e-54 216.1 134 76.1
Glyma.14G020800 Glycine max HOM05D006019 ORTHO05D007900 8.4e-48 195.7 137 68.6
Oeu026380.1 Olea europaea HOM05D006019 ORTHO05D007900 7.4e-44 182.6 136 67.6
TAR720G0004 Trochodendron aralioides HOM05D006019 ORTHO05D007900 3.4e-41 173.7 107 79.4
HPP92_015779 Vanilla planifolia HOM05D006019 ORTHO05D007900 2.5e-39 167.5 224 42.0
Cre01.g001750 Chlamydomonas reinhardtii HOM05D006019 ORTHO05D007900 5.3e-34 149.8 467 23.8
Glyma.14G020666 Glycine max HOM05D006019 ORTHO05D007900 2.6e-28 131.0 92 67.4
VMungo0647G0792 Vigna mungo HOM05D006019 ORTHO05D007900 3.7e-27 127.1 94 69.1
Hma1.2p1_4091F.1_g338270 Hydrangea macrophylla HOM05D006019 ORTHO05D007900 5.3e-26 123.2 114 61.4
CDE04G2936 Ceratophyllum demersum HOM05D006019 ORTHO05D007900 9.1e-26 122.5 68 86.8
C09p45770 Brassica napus HOM05D006019 ORTHO05D007900 2.0e-20 104.8 220 33.2
C09p45760 Brassica napus HOM05D006019 ORTHO05D007900 2.6e-20 104.4 120 52.5
BolC9t57451H Brassica oleracea HOM05D006019 ORTHO05D007900 7.4e-20 102.8 195 33.8
BraA10t43342Z Brassica rapa HOM05D006019 ORTHO05D007900 3.7e-19 100.5 229 33.2
BcaC04g20257 Brassica carinata HOM05D006019 ORTHO05D007900 2.1e-14 84.7 80 57.5
unitig_22.g6169 Utricularia gibba HOM05D006019 ORTHO05D007900 3.5e-09 67.4 71 49.3
Ca_29171_v3 Cicer arietinum L. HOM05D006019 ORTHO05D003051 5.9e-09 66.6 440 20.9
BolC9t57452H Brassica oleracea HOM05D006019 ORTHO05D000049 1.2e-06 58.9 44 61.4
BraA02t07229Z Brassica rapa HOM05D011432 ORTHO05D014939 3.6e-06 57.4 40 62.5


User provided reference genes

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