Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro08108 Vaccinium macrocarpon HOM05D007775 ORTHO05D009858 1.1e-52 209.5 98 100.0
Rhsim04G0218300 Rhododendron simsii HOM05D007775 ORTHO05D009858 2.8e-43 178.3 98 83.7
Actinidia40242 Actinidia chinensis HOM05D007775 ORTHO05D009858 1.1e-34 149.8 94 73.4
Dinv38311 Davidia involucrata HOM05D007775 ORTHO05D009858 1.2e-33 146.4 91 71.4
RcHm_v2.0_Chr4g0421471 Rosa chinensis HOM05D007775 ORTHO05D009858 5.9e-33 144.1 94 67.0
Cfa015361 Carpinus fangiana HOM05D007775 ORTHO05D009858 5.0e-32 141.0 90 66.7
FAN07G2931 Fragaria x ananassa HOM05D007775 ORTHO05D009858 8.5e-32 140.2 94 64.9
FvH4_4g17570 Fragaria vesca HOM05D007775 ORTHO05D009858 5.5e-31 137.5 94 63.8
CAN.G256.16 Capsicum annuum HOM05D007775 ORTHO05D009858 3.9e-29 131.3 92 66.3
QL06p007731 Quercus lobata HOM05D007775 ORTHO05D009858 5.1e-29 131.0 90 66.7
Prupe.1G140100 Prunus persica HOM05D007775 ORTHO05D009858 3.3e-28 128.3 90 63.3
Solyc06g054580.4 Solanum lycopersicum HOM05D007775 ORTHO05D009858 3.3e-28 128.3 92 63.0
CiPaw.02G085200 Carya illinoinensis HOM05D007775 ORTHO05D009858 4.4e-28 127.9 90 63.3
Gohir.D10G168200 Gossypium hirsutum HOM05D007775 ORTHO05D009858 4.4e-28 127.9 91 62.6
TAR362G1316 Trochodendron aralioides HOM05D007775 ORTHO05D009858 4.4e-28 127.9 91 58.2
Lalb_Chr13g0303771 Lupinus albus HOM05D007775 ORTHO05D009858 7.4e-28 127.1 92 56.5
Sopen06g019650 Solanum pennellii HOM05D007775 ORTHO05D009858 9.7e-28 126.7 92 63.0
COL.COLO4_13909 Corchorus olitorius HOM05D007775 ORTHO05D009858 1.7e-27 125.9 91 63.7
Cc03_g02150 Coffea canephora HOM05D007775 ORTHO05D009858 2.2e-27 125.6 96 59.4
Lsat_1_v5_gn_5_52881 Lactuca sativa HOM05D007775 ORTHO05D009858 2.8e-27 125.2 90 62.2
ECA240G4119 Erigeron canadensis HOM05D007775 ORTHO05D009858 3.7e-27 124.8 90 63.3
Peaxi162Scf00033g01324 Petunia axillaris HOM05D007775 ORTHO05D009858 3.7e-27 124.8 94 59.6
TWI09G0118 Tripterygium wilfordii HOM05D007775 ORTHO05D009858 3.7e-27 124.8 91 61.5
PGSC0003DMG400030783 Solanum tuberosum HOM05D007775 ORTHO05D009858 4.8e-27 124.4 92 62.0
Gorai.011G187800 Gossypium raimondii HOM05D007775 ORTHO05D009858 6.3e-27 124.0 94 59.6
Potri.008G215200 Populus trichocarpa HOM05D007775 ORTHO05D009858 6.3e-27 124.0 90 62.2
Sabra08G0155600 Salix brachista HOM05D007775 ORTHO05D009858 1.1e-26 123.2 90 62.2
arahy.Tifrunner.gnm1.ann1.J8QG6N Arachis hypogaea HOM05D007775 ORTHO05D009858 1.4e-26 122.9 91 57.1
arahy.Tifrunner.gnm1.ann1.KJPE0P Arachis hypogaea HOM05D007775 ORTHO05D009858 1.4e-26 122.9 91 57.1
MBI19_g01943_MAGBIO Magnolia biondii HOM05D007775 ORTHO05D009858 1.8e-26 122.5 93 57.0
Ciclev10005542m.g Citrus clementina HOM05D007775 ORTHO05D009858 2.4e-26 122.1 91 59.3
MD13G1171700 Malus domestica HOM05D007775 ORTHO05D009858 5.3e-26 120.9 92 60.9
Eucgr.B01278 Eucalyptus grandis HOM05D007775 ORTHO05D009858 7.0e-26 120.6 90 60.0
HanXRQChr03g0080871 Helianthus annuus HOM05D007775 ORTHO05D009858 9.1e-26 120.2 90 60.0
Thecc.04G279800 Theobroma cacao HOM05D007775 ORTHO05D009858 2.6e-25 118.6 90 60.0
MELO3C021348.2 Cucumis melo HOM05D007775 ORTHO05D009858 3.5e-25 118.2 92 56.5
CsaV3_6G017340 Cucumis sativus L. HOM05D007775 ORTHO05D009858 7.7e-25 117.1 91 56.0
Nn3g16301 Nelumbo nucifera HOM05D007775 ORTHO05D009858 7.7e-25 117.1 98 53.1
PGR031G0649 Punica granatum HOM05D007775 ORTHO05D009858 7.7e-25 117.1 93 57.0
GSVIVG01017782001 Vitis vinifera HOM05D007775 ORTHO05D009858 7.7e-25 117.1 90 60.0
CSS0035717 Camellia sinensis var. sinensis HOM05D007775 ORTHO05D009858 1.7e-24 115.9 72 70.8
THA.LOC104820248 Tarenaya hassleriana HOM05D007775 ORTHO05D009858 2.2e-24 115.5 90 55.6
ClCG06G005300 Citrullus lanatus HOM05D007775 ORTHO05D009858 2.9e-24 115.2 91 56.0
CSS0050081 Camellia sinensis var. sinensis HOM05D007775 ORTHO05D009858 3.8e-24 114.8 72 70.8
Ah.13g074550 Amaranthus hybridus HOM05D007775 ORTHO05D009858 5.0e-24 114.4 91 58.2
PSO210G6602 Papaver somniferum HOM05D007775 ORTHO05D009858 1.1e-23 113.2 92 52.2
Aa31LG5G20500 Aethionema arabicum HOM05D007775 ORTHO05D009858 1.9e-23 112.5 98 54.1
CSS0036115 Camellia sinensis var. sinensis HOM05D007775 ORTHO05D009858 5.5e-23 110.9 72 69.4
Sp4g21450 Schrenkiella parvula HOM05D007775 ORTHO05D009858 5.5e-23 110.9 91 57.1
CARHR133870 Cardamine hirsuta HOM05D007775 ORTHO05D009858 7.2e-23 110.5 91 54.9
AT2G39100 Arabidopsis thaliana HOM05D007775 ORTHO05D009858 9.4e-23 110.2 91 56.0
AL4G36400 Arabidopsis lyrata HOM05D007775 ORTHO05D009858 1.2e-22 109.8 91 56.0
Thhalv10017000m.g Eutrema salsugineum HOM05D007775 ORTHO05D009858 4.7e-22 107.8 91 56.0
Haze_01245 Corylus avellana HOM05D007775 ORTHO05D009858 1.4e-21 106.3 71 63.4
Lj6A671T60 Lonicera japonica HOM05D007775 ORTHO05D009858 3.0e-21 105.1 71 70.4
CANSAT78G0244 Cannabis sativa HOM05D007775 ORTHO05D009858 4.4e-20 101.3 72 62.5
SEGI_15450 Sequoiadendron giganteum HOM05D007775 ORTHO05D009858 1.3e-19 99.8 98 44.9
C04p67030 Brassica napus HOM05D007775 ORTHO05D009858 1.7e-19 99.4 93 48.4
BolC4t28205H Brassica oleracea HOM05D007775 ORTHO05D009858 1.7e-19 99.4 93 48.4
BraA04t18439Z Brassica rapa HOM05D007775 ORTHO05D009858 1.7e-19 99.4 93 51.6
Carub.0004s2115 Capsella rubella HOM05D007775 ORTHO05D009858 1.7e-19 99.4 92 51.1
FAN12G2546 Fragaria x ananassa HOM05D007775 ORTHO05D009858 4.8e-19 97.8 72 59.7
Oeu021116.1 Olea europaea HOM05D007775 ORTHO05D009858 1.1e-18 96.7 72 59.7
Duzib151G1205 Durio zibethinus HOM05D007775 ORTHO05D009858 1.4e-18 96.3 74 58.1
Atru.chr4.2786 Acer truncatum HOM05D007775 ORTHO05D009858 7.0e-18 94.0 77 51.9
Nitab4.5_0002148g0040 Nicotiana tabacum HOM05D007775 ORTHO05D009858 9.1e-18 93.6 73 61.6
Nitab4.5_0001459g0060 Nicotiana tabacum HOM05D007775 ORTHO05D009858 1.6e-17 92.8 73 61.6
ATR0706G202 Amborella trichopoda HOM05D007775 ORTHO05D009858 2.6e-17 92.0 74 52.7
Manes.15G015200 Manihot esculenta HOM05D007775 ORTHO05D009858 5.9e-17 90.9 77 63.6
Sed0017003 Sechium edule HOM05D007775 ORTHO05D009858 5.9e-17 90.9 82 50.0
Sc06g0007440 Simmondsia chinensis HOM05D007775 ORTHO05D009858 8.5e-16 87.0 72 55.6
Gohir.A10G161700 Gossypium hirsutum HOM05D007775 ORTHO05D009858 1.1e-15 86.7 75 53.3
Cpa.g.sc197.12 Carica papaya HOM05D007775 ORTHO05D009858 1.5e-15 86.3 73 54.8
QL06p007898 Quercus lobata HOM05D007775 ORTHO05D009858 8.0e-14 80.5 65 60.0
Pp3c21_11960 Physcomitrium patens HOM05D007775 ORTHO05D009858 4.0e-13 78.2 111 34.2
SMO147G0036 Selaginella moellendorffii HOM05D007775 ORTHO05D009858 4.0e-13 78.2 101 41.6
AL92U10060 Arabidopsis lyrata HOM05D007775 ORTHO05D009858 1.6e-09 66.2 64 50.0
Prupe.8G004900 Prunus persica HOM05D007775 ORTHO05D009858 6.5e-08 60.8 47 57.4
Aqoxy2G03074 Aquilegia oxysepala HOM05D007775 ORTHO05D009858 7.2e-07 57.4 39 66.7
A04p29770 Brassica napus HOM05D007775 ORTHO05D009858 9.4e-07 57.0 36 61.1
DCAR_024553 Daucus carota HOM05D007775 ORTHO05D009858 1.6e-06 56.2 42 50.0
Cfa006572 Carpinus fangiana HOM05D006625 ORTHO05D008060 2.1e-06 55.8 95 31.6
Prupe.6G327800 Prunus persica HOM05D006625 ORTHO05D008060 8.0e-06 53.9 95 29.5


User provided reference genes

Program Settings