Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro06588 Vaccinium macrocarpon HOM05D005720 ORTHO05D006984 0.0e+00 1246.5 670 100.0
Rhsim03G0197100 Rhododendron simsii HOM05D005720 ORTHO05D006984 1.7e-253 879.4 633 74.4
Actinidia08611 Actinidia chinensis HOM05D005720 ORTHO05D006984 1.3e-200 703.7 632 59.8
Dinv28352 Davidia involucrata HOM05D005720 ORTHO05D006984 1.7e-184 650.2 629 56.8
Hma1.2p1_0142F.1_g064130 Hydrangea macrophylla HOM05D005720 ORTHO05D006984 2.4e-149 533.5 623 50.2
TAR629G0723 Trochodendron aralioides HOM05D005720 ORTHO05D006984 5.8e-140 502.3 638 47.6
QL09p011597 Quercus lobata HOM05D005720 ORTHO05D006984 1.8e-133 480.7 628 45.2
Haze_00092 Corylus avellana HOM05D005720 ORTHO05D006984 3.0e-128 463.4 627 44.3
Cfa016346 Carpinus fangiana HOM05D005720 ORTHO05D006984 6.7e-128 462.2 626 44.1
Prupe.2G305400 Prunus persica HOM05D005720 ORTHO05D006984 2.6e-124 450.3 629 41.8
Manes.06G155900 Manihot esculenta HOM05D005720 ORTHO05D006984 3.8e-123 446.4 624 43.9
GSVIVG01028746001 Vitis vinifera HOM05D005720 ORTHO05D006984 1.1e-122 444.9 642 43.1
CiPaw.06G006200 Carya illinoinensis HOM05D005720 ORTHO05D006984 1.4e-122 444.5 618 43.7
Hma1.2p1_0142F.1_g064120 Hydrangea macrophylla HOM05D005720 ORTHO05D006984 2.5e-122 443.7 474 53.6
MD07G1283200 Malus domestica HOM05D005720 ORTHO05D006984 2.5e-122 443.7 620 41.9
Cc02_g02050 Coffea canephora HOM05D005720 ORTHO05D006984 5.1e-120 436.0 618 43.4
Nn1g01775 Nelumbo nucifera HOM05D005720 ORTHO05D006984 7.4e-119 432.2 635 42.5
MD01G1213400 Malus domestica HOM05D005720 ORTHO05D006984 2.0e-116 424.1 615 41.1
Thecc.03G190400 Theobroma cacao HOM05D005720 ORTHO05D006984 1.7e-115 421.0 623 41.7
Hund11695 Selenicereus undatus HOM05D005720 ORTHO05D006984 2.9e-115 420.2 651 41.3
TWI39G1277 Tripterygium wilfordii HOM05D005720 ORTHO05D006984 1.1e-114 418.3 631 41.4
Nitab4.5_0000472g0110 Nicotiana tabacum HOM05D005720 ORTHO05D006984 7.2e-114 415.6 594 43.3
Oeu037117.2 Olea europaea HOM05D005720 ORTHO05D006984 3.5e-113 413.3 640 40.6
Sabra12G0022900 Salix brachista HOM05D005720 ORTHO05D006984 1.8e-112 411.0 622 41.8
Peaxi162Scf00904g00464 Petunia axillaris HOM05D005720 ORTHO05D006984 1.9e-111 407.5 593 44.2
Potri.012G033800 Populus trichocarpa HOM05D005720 ORTHO05D006984 1.9e-111 407.5 622 41.6
Duzib084G1243 Durio zibethinus HOM05D005720 ORTHO05D006984 1.8e-109 401.0 628 41.2
COL.COLO4_24780 Corchorus olitorius HOM05D005720 ORTHO05D006984 2.6e-108 397.1 626 41.5
EL10Ac3g05366 Beta vulgaris HOM05D005720 ORTHO05D006984 3.2e-106 390.2 630 40.5
Lsat_1_v5_gn_1_45000 Lactuca sativa HOM05D005720 ORTHO05D006984 5.5e-106 389.4 636 43.4
Sopen03g003510 Solanum pennellii HOM05D005720 ORTHO05D006984 9.4e-106 388.7 592 41.7
AUR62031469 Chenopodium quinoa HOM05D005720 ORTHO05D006984 1.4e-104 384.8 624 40.9
Solyc03g007550.4 Solanum lycopersicum HOM05D005720 ORTHO05D006984 1.8e-104 384.4 592 41.2
HanXRQChr01g0031161 Helianthus annuus HOM05D005720 ORTHO05D006984 3.9e-104 383.3 586 42.2
Aqoxy7G00210 Aquilegia oxysepala HOM05D005720 ORTHO05D006984 5.1e-104 382.9 646 39.0
MBI06_g04292_MAGBIO Magnolia biondii HOM05D005720 ORTHO05D006984 2.0e-103 380.9 635 40.9
Sc13g0009450 Simmondsia chinensis HOM05D005720 ORTHO05D006984 1.1e-101 375.2 622 38.1
FAN10G2558 Fragaria x ananassa HOM05D005720 ORTHO05D006984 2.4e-101 374.0 631 40.6
Gohir.A09G183200 Gossypium hirsutum HOM05D005720 ORTHO05D006984 6.9e-101 372.5 621 39.5
CAN.G108.10 Capsicum annuum HOM05D005720 ORTHO05D006984 2.0e-100 370.9 591 40.9
HanXRQChr11g0353671 Helianthus annuus HOM05D005720 ORTHO05D006984 7.7e-100 369.0 682 41.6
Gohir.D09G177900 Gossypium hirsutum HOM05D005720 ORTHO05D006984 1.4e-98 364.8 621 39.3
FvH4_7g30790 Fragaria vesca HOM05D005720 ORTHO05D006984 4.2e-98 363.2 630 38.9
arahy.Tifrunner.gnm1.ann1.YA4Y9S Arachis hypogaea HOM05D005720 ORTHO05D006984 9.4e-98 362.1 619 38.0
FAN03G0014 Fragaria x ananassa HOM05D005720 ORTHO05D006984 9.4e-98 362.1 633 40.1
arahy.Tifrunner.gnm1.ann1.35A5BC Arachis hypogaea HOM05D005720 ORTHO05D006984 1.2e-97 361.7 619 37.6
DCAR_010640 Daucus carota HOM05D005720 ORTHO05D006984 2.1e-97 360.9 637 38.9
FAN01G1865 Fragaria x ananassa HOM05D005720 ORTHO05D006984 7.9e-97 359.0 628 38.5
FAN06G1427 Fragaria x ananassa HOM05D005720 ORTHO05D006984 1.0e-96 358.6 630 38.4
Migut.F00255 Erythranthe guttata HOM05D005720 ORTHO05D006984 1.8e-96 357.8 622 38.3
FAN06G3446 Fragaria x ananassa HOM05D005720 ORTHO05D006984 2.3e-96 357.5 630 38.3
MSTRG.27056 Avicennia marina HOM05D005720 ORTHO05D006984 6.7e-96 355.9 589 38.9
Eucgr.K00315 Eucalyptus grandis HOM05D005720 ORTHO05D006984 2.6e-95 354.0 644 39.9
Hma1.2p1_1891F.1_g306670 Hydrangea macrophylla HOM05D005720 ORTHO05D006984 9.7e-95 352.1 629 38.5
SalBow4G2908 Salvia bowleyana HOM05D005720 ORTHO05D006984 4.8e-94 349.7 631 38.2
SalBow4G2744 Salvia bowleyana HOM05D005720 ORTHO05D006984 8.2e-94 349.0 631 38.0
RcHm_v2.0_Chr1g0379731 Rosa chinensis HOM05D005720 ORTHO05D006984 3.1e-93 347.1 504 42.9
Ah.07g206170 Amaranthus hybridus HOM05D005720 ORTHO05D006984 1.9e-90 337.8 627 36.2
AUR62021063 Chenopodium quinoa HOM05D005720 ORTHO05D006984 2.5e-90 337.4 628 37.4
Gorai.006G200000 Gossypium raimondii HOM05D005720 ORTHO05D006984 5.5e-90 336.3 619 37.5
ClCG07G011830 Citrullus lanatus HOM05D005720 ORTHO05D006984 2.7e-89 334.0 629 36.6
TAR636G3648 Trochodendron aralioides HOM05D005720 ORTHO05D006984 4.0e-88 330.1 399 46.6
Aa31LG3G9180 Aethionema arabicum HOM05D005720 ORTHO05D006984 1.5e-87 328.2 626 36.3
AL8G27450 Arabidopsis lyrata HOM05D005720 ORTHO05D006984 3.3e-87 327.0 632 35.8
Cpa.g.sc3.32 Carica papaya HOM05D005720 ORTHO05D006984 3.3e-87 327.0 637 37.7
MD01G1213200 Malus domestica HOM05D005720 ORTHO05D006984 5.7e-87 326.2 480 39.4
THA.LOC104825125 Tarenaya hassleriana HOM05D005720 ORTHO05D006984 9.7e-87 325.5 628 35.2
SHI10811 Sapria himalayana HOM05D005720 ORTHO05D006984 4.8e-86 323.2 667 34.3
Glyma.16G069100 Glycine max HOM05D005720 ORTHO05D006984 1.8e-85 321.2 621 36.1
Thhalv10012590m.g Eutrema salsugineum HOM05D005720 ORTHO05D006984 3.1e-85 320.5 625 35.4
BcaC03g14481 Brassica carinata HOM05D005720 ORTHO05D006984 4.1e-85 320.1 630 35.7
CARHR265920 Cardamine hirsuta HOM05D005720 ORTHO05D006984 4.1e-85 320.1 633 35.5
C09p42670 Brassica napus HOM05D005720 ORTHO05D006984 9.1e-85 318.9 629 35.1
BolC9t57143H Brassica oleracea HOM05D005720 ORTHO05D006984 9.1e-85 318.9 629 35.1
Ca_27881_v3 Cicer arietinum L. HOM05D005720 ORTHO05D006984 1.2e-84 318.5 633 35.4
FAN10G0387 Fragaria x ananassa HOM05D005720 ORTHO05D006984 1.6e-84 318.2 609 38.1
AT5G52950 Arabidopsis thaliana HOM05D005720 ORTHO05D006984 1.0e-83 315.5 624 35.9
BolC2t08045H Brassica oleracea HOM05D005720 ORTHO05D006984 1.0e-83 315.5 630 35.4
C02p19150 Brassica napus HOM05D005720 ORTHO05D006984 1.7e-83 314.7 630 35.2
BraA02t06213Z Brassica rapa HOM05D005720 ORTHO05D006984 2.2e-83 314.3 629 35.1
Lj3P914T60 Lonicera japonica HOM05D005720 ORTHO05D006984 1.5e-82 311.6 354 48.9
CsaV3_4G002370 Cucumis sativus L. HOM05D005720 ORTHO05D006984 5.5e-82 309.7 595 35.6
A02p11480 Brassica napus HOM05D005720 ORTHO05D006984 2.7e-81 307.4 630 34.6
Sp6g15110 Schrenkiella parvula HOM05D005720 ORTHO05D006984 6.8e-80 302.8 627 35.2
TPR.G16464 Trifolium pratense HOM05D005720 ORTHO05D006984 1.2e-79 302.0 633 34.1
MELO3C017804.2 Cucumis melo HOM05D005720 ORTHO05D006984 2.6e-79 300.8 593 36.9
Medtr8g058270 Medicago truncatula HOM05D005720 ORTHO05D006984 7.5e-79 299.3 622 35.2
ECA248G2416 Erigeron canadensis HOM05D005720 ORTHO05D006984 9.8e-79 298.9 608 34.7
PSO384G4812 Papaver somniferum HOM05D005720 ORTHO05D006984 9.8e-79 298.9 631 34.4
SGA_v2.0_scaffold192G40596 Striga asiatica HOM05D005720 ORTHO05D006984 2.0e-76 291.2 592 35.1
Carub.0008s1313 Capsella rubella HOM05D005720 ORTHO05D006984 7.7e-76 289.3 631 35.0
Lj3g0007394 Lotus japonicus HOM05D005720 ORTHO05D006984 7.7e-76 289.3 627 33.2
PSO135G0324 Papaver somniferum HOM05D005720 ORTHO05D006984 8.5e-75 285.8 628 34.2
Lalb_Chr06g0161451 Lupinus albus HOM05D005720 ORTHO05D006984 1.1e-74 285.4 634 38.0
Nitab4.5_0001331g0120 Nicotiana tabacum HOM05D005720 ORTHO05D006984 2.1e-73 281.2 595 35.3
VMungo1127G0215 Vigna mungo HOM05D005720 ORTHO05D006984 4.4e-71 273.5 632 33.2
BcaB08g35658 Brassica carinata HOM05D005720 ORTHO05D006984 5.4e-69 266.5 500 35.0
unitig_747.g21855 Utricularia gibba HOM05D000121 ORTHO05D000102 9.5e-66 255.8 629 32.3
ATR1131G019 Amborella trichopoda HOM05D005720 ORTHO05D006984 3.4e-63 247.3 645 32.1
HPP92_005221 Vanilla planifolia HOM05D005720 ORTHO05D006984 7.5e-63 246.1 619 32.1
Psat4g140280 Pisum sativum HOM05D005720 ORTHO05D006984 1.4e-61 241.9 490 34.7
CDE02G2607 Ceratophyllum demersum HOM05D005720 ORTHO05D006984 3.0e-59 234.2 457 35.4
BraA10t43127Z Brassica rapa HOM05D005720 ORTHO05D006984 6.8e-48 196.4 308 40.3
BcaB05g21993 Brassica carinata HOM05D005720 ORTHO05D006984 2.3e-43 181.4 307 40.7
MBI16_g03131_MAGBIO Magnolia biondii HOM05D005720 ORTHO05D006984 4.0e-40 170.6 427 33.0
HPP92_005214 Vanilla planifolia HOM05D005720 ORTHO05D006984 2.0e-39 168.3 658 28.1
Lj3A914T79 Lonicera japonica HOM05D005720 ORTHO05D006984 2.5e-34 151.4 180 47.2
Phvul.011G167400 Phaseolus vulgaris HOM05D005720 ORTHO05D006984 3.1e-32 144.4 271 34.7
Zm00001eb119640 Zea mays HOM05D005720 ORTHO05D006984 8.9e-32 142.9 625 26.6
SEGI_30168 Sequoiadendron giganteum HOM05D005720 ORTHO05D006984 2.0e-31 141.7 648 25.9
PGR142G3228 Punica granatum HOM05D005720 ORTHO05D006984 4.2e-29 134.0 641 24.2
CSS0038820 Camellia sinensis var. sinensis HOM05D005720 ORTHO05D006984 6.6e-27 126.7 137 56.2
CSS0019438 Camellia sinensis var. sinensis HOM05D005720 ORTHO05D006984 1.9e-26 125.2 137 55.5
SEGI_32546 Sequoiadendron giganteum HOM05D005720 ORTHO05D006984 2.5e-18 98.2 504 24.0
Lju188P3T29 Lonicera japonica HOM05D005720 ORTHO05D006984 3.1e-16 91.3 84 63.1
RcHm_v2.0_Chr1g0379741 Rosa chinensis HOM05D005720 ORTHO05D006984 9.9e-15 86.3 82 62.2
Lsat_1_v5_gn_5_90621 Lactuca sativa HOM05D005720 ORTHO05D006984 4.6e-12 77.4 186 40.3


User provided reference genes

Program Settings