Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro06477 Vaccinium macrocarpon HOM05D003381 ORTHO05D003880 4.3e-38 161.4 119 100.0
Dinv17275 Davidia involucrata HOM05D003381 ORTHO05D003880 6.3e-21 104.4 118 61.0
Sopen03g027500 Solanum pennellii HOM05D003381 ORTHO05D003880 3.2e-17 92.0 118 61.0
PGSC0003DMG400000546 Solanum tuberosum HOM05D003381 ORTHO05D003880 5.5e-17 91.3 118 64.4
Nitab4.5_0002691g0070 Nicotiana tabacum HOM05D003381 ORTHO05D003880 2.7e-16 89.0 117 57.3
Nitab4.5_0002691g0080 Nicotiana tabacum HOM05D003381 ORTHO05D003880 2.7e-16 89.0 116 60.3
CSS0002942 Camellia sinensis var. sinensis HOM05D003381 ORTHO05D003880 3.6e-16 88.6 110 68.2
Solyc03g096770.1 Solanum lycopersicum HOM05D003381 ORTHO05D003880 7.9e-16 87.4 118 61.0
PGSC0003DMG400000545 Solanum tuberosum HOM05D003381 ORTHO05D003880 7.9e-16 87.4 115 58.3
Oeu063749.1 Olea europaea HOM05D003381 ORTHO05D003880 1.0e-15 87.0 118 58.5
vmacro06476 Vaccinium macrocarpon HOM05D003381 ORTHO05D003880 1.0e-15 87.0 102 65.7
Sopen03g027520 Solanum pennellii HOM05D003381 ORTHO05D003880 1.4e-15 86.7 113 57.5
Solyc03g096780.1 Solanum lycopersicum HOM05D003381 ORTHO05D003880 2.3e-15 85.9 113 57.5
Actinidia34289 Actinidia chinensis HOM05D003381 ORTHO05D003880 3.0e-15 85.5 109 64.2
CSS0005275 Camellia sinensis var. sinensis HOM05D003381 ORTHO05D003880 3.0e-15 85.5 126 51.6
Nitab4.5_0002867g0010 Nicotiana tabacum HOM05D003381 ORTHO05D003880 3.0e-15 85.5 116 59.5
Cc02_g00580 Coffea canephora HOM05D003381 ORTHO05D003880 3.9e-15 85.1 119 49.6
CAN.G303.62 Capsicum annuum HOM05D003381 ORTHO05D003880 1.1e-14 83.6 95 53.7
Nitab4.5_0007121g0010 Nicotiana tabacum HOM05D003381 ORTHO05D003880 3.3e-14 82.0 113 60.2
Glyma.06G139300 Glycine max HOM05D003381 ORTHO05D003880 5.7e-14 81.3 97 66.0
Nitab4.5_0000115g0190 Nicotiana tabacum HOM05D003381 ORTHO05D003880 5.7e-14 81.3 109 56.9
Hma1.2p1_0115F.1_g055840 Hydrangea macrophylla HOM05D003381 ORTHO05D003880 9.7e-14 80.5 85 60.0
Peaxi162Scf00007g00254 Petunia axillaris HOM05D003381 ORTHO05D003880 2.2e-13 79.3 119 47.9
Peaxi162Scf00815g00116 Petunia axillaris HOM05D003381 ORTHO05D003880 2.2e-13 79.3 110 56.4
RcHm_v2.0_Chr1g0383321 Rosa chinensis HOM05D003381 ORTHO05D003880 2.2e-13 79.3 92 53.3
Oeu017357.1 Olea europaea HOM05D003381 ORTHO05D003880 3.7e-13 78.6 115 58.3
MD01G1231600 Malus domestica HOM05D003381 ORTHO05D003880 8.2e-13 77.4 93 61.3
MD07G1303600 Malus domestica HOM05D003381 ORTHO05D003880 8.2e-13 77.4 95 57.9
Dinv29190 Davidia involucrata HOM05D003381 ORTHO05D003880 1.1e-12 77.0 108 51.9
FAN10G2693 Fragaria x ananassa HOM05D003381 ORTHO05D003880 1.1e-12 77.0 92 50.0
FAN10G4285 Fragaria x ananassa HOM05D003381 ORTHO05D003880 1.1e-12 77.0 92 50.0
Thecc.03G212300 Theobroma cacao HOM05D003381 ORTHO05D003880 1.4e-12 76.6 118 70.3
Sopen03g027490 Solanum pennellii HOM05D003381 ORTHO05D003880 1.8e-12 76.3 114 47.4
Peaxi162Scf01650g00008 Petunia axillaris HOM05D003381 ORTHO05D003880 2.4e-12 75.9 119 66.4
PGSC0003DMG400027025 Solanum tuberosum HOM05D003381 ORTHO05D003880 2.4e-12 75.9 113 48.7
CAN.G303.61 Capsicum annuum HOM05D003381 ORTHO05D003880 3.1e-12 75.5 93 51.6
FvH4_7g33340 Fragaria vesca HOM05D003381 ORTHO05D003880 3.1e-12 75.5 92 57.6
HanXRQChr08g0225771 Helianthus annuus HOM05D003381 ORTHO05D003880 3.1e-12 75.5 90 56.7
HanXRQChr08g0225851 Helianthus annuus HOM05D003381 ORTHO05D003880 3.1e-12 75.5 90 56.7
Atru.chr12.2499 Acer truncatum HOM05D003381 ORTHO05D003880 4.1e-12 75.1 83 57.8
Atru.chr12.2523 Acer truncatum HOM05D003381 ORTHO05D003880 4.1e-12 75.1 83 57.8
FAN03G2343 Fragaria x ananassa HOM05D003381 ORTHO05D003880 4.1e-12 75.1 92 48.9
Glyma.04G225500 Glycine max HOM05D003381 ORTHO05D003880 4.1e-12 75.1 122 56.6
HanXRQChr08g0225861 Helianthus annuus HOM05D003381 ORTHO05D003880 5.3e-12 74.7 113 47.8
Phvul.009G040500 Phaseolus vulgaris HOM05D003381 ORTHO05D003880 5.3e-12 74.7 101 50.5
Prupe.2G322300 Prunus persica HOM05D003381 ORTHO05D003880 5.3e-12 74.7 92 53.3
Migut.F00121 Erythranthe guttata HOM05D003381 ORTHO05D003880 6.9e-12 74.3 117 43.6
HanXRQChr08g0225881 Helianthus annuus HOM05D003381 ORTHO05D003880 6.9e-12 74.3 113 50.4
Migut.F00967 Erythranthe guttata HOM05D003381 ORTHO05D003880 9.1e-12 73.9 117 44.4
VMungo1309G1451 Vigna mungo HOM05D003381 ORTHO05D003880 1.2e-11 73.6 122 59.0
Solyc06g072990.1 Solanum lycopersicum HOM05D003381 ORTHO05D003880 1.5e-11 73.2 113 59.3
Eucgr.K00530 Eucalyptus grandis HOM05D003381 ORTHO05D003880 2.0e-11 72.8 99 57.6
TPR.G35911 Trifolium pratense HOM05D003381 ORTHO05D003880 2.0e-11 72.8 88 53.4
TAR375G0964 Trochodendron aralioides HOM05D003381 ORTHO05D003880 2.0e-11 72.8 108 50.9
Ciclev10022951m.g Citrus clementina HOM05D003381 ORTHO05D003880 2.6e-11 72.4 107 49.5
Eucgr.K00482 Eucalyptus grandis HOM05D003381 ORTHO05D003880 3.4e-11 72.0 111 55.0
Psat5g070520 Pisum sativum HOM05D003381 ORTHO05D003880 3.4e-11 72.0 89 59.6
PGSC0003DMG400000547 Solanum tuberosum HOM05D003381 ORTHO05D003880 3.4e-11 72.0 117 53.0
Eucgr.K00481 Eucalyptus grandis HOM05D003381 ORTHO05D003880 4.5e-11 71.6 117 43.6
Solyc03g096760.1 Solanum lycopersicum HOM05D003381 ORTHO05D003880 4.5e-11 71.6 114 45.6
Ca_16840_v3 Cicer arietinum L. HOM05D003381 ORTHO05D003880 5.9e-11 71.2 96 52.1
Sopen06g029340 Solanum pennellii HOM05D003381 ORTHO05D003880 5.9e-11 71.2 115 47.8
AUR62005946 Chenopodium quinoa HOM05D003381 ORTHO05D003880 1.3e-10 70.1 88 48.9
ECA233G1855 Erigeron canadensis HOM05D003381 ORTHO05D003880 1.3e-10 70.1 110 52.7
Gohir.A08G106800 Gossypium hirsutum HOM05D003381 ORTHO05D003880 1.3e-10 70.1 100 63.0
CANSAT21G1431 Cannabis sativa HOM05D003381 ORTHO05D003880 1.7e-10 69.7 86 51.2
DCAR_010556 Daucus carota HOM05D003381 ORTHO05D003880 2.2e-10 69.3 88 47.7
Gohir.A08G106600 Gossypium hirsutum HOM05D003381 ORTHO05D003880 2.2e-10 69.3 88 62.5
Gohir.D08G117850 Gossypium hirsutum HOM05D003381 ORTHO05D003880 2.2e-10 69.3 88 67.0
Gorai.004G126400 Gossypium raimondii HOM05D003381 ORTHO05D003880 2.2e-10 69.3 88 67.0
Lj1g0021256 Lotus japonicus HOM05D003381 ORTHO05D003880 2.9e-10 68.9 88 50.0
Medtr3g093400 Medicago truncatula HOM05D003381 ORTHO05D003880 2.9e-10 68.9 112 50.0
SalBow4G2332 Salvia bowleyana HOM05D003381 ORTHO05D003880 2.9e-10 68.9 111 42.3
COL.COLO4_14401 Corchorus olitorius HOM05D003381 ORTHO05D003880 3.8e-10 68.6 103 63.1
MSTRG.26951 Avicennia marina HOM05D003381 ORTHO05D003880 5.0e-10 68.2 111 44.1
AUR62028119 Chenopodium quinoa HOM05D003381 ORTHO05D003880 5.0e-10 68.2 118 51.7
Gohir.D08G117900 Gossypium hirsutum HOM05D003381 ORTHO05D003880 5.0e-10 68.2 100 62.0
Gorai.004G126500 Gossypium raimondii HOM05D003381 ORTHO05D003880 5.0e-10 68.2 100 62.0
AUR62005945 Chenopodium quinoa HOM05D003381 ORTHO05D003880 1.1e-09 67.0 91 48.4
ClCG01G000030 Citrullus lanatus HOM05D003381 ORTHO05D003880 1.1e-09 67.0 85 51.8
Haze_00337 Corylus avellana HOM05D003381 ORTHO05D003880 1.1e-09 67.0 75 66.7
CANSAT21G0934 Cannabis sativa HOM05D003381 ORTHO05D003880 1.4e-09 66.6 91 49.5
Duzib084G1005 Durio zibethinus HOM05D003381 ORTHO05D003880 1.4e-09 66.6 107 57.9
MBI12_g23072_MAGBIO Magnolia biondii HOM05D003381 ORTHO05D003880 1.4e-09 66.6 88 73.9
MBI12_g33141_MAGBIO Magnolia biondii HOM05D003381 ORTHO05D003880 1.4e-09 66.6 88 73.9
QL09p005975 Quercus lobata HOM05D003381 ORTHO05D003880 1.4e-09 66.6 116 56.9
Duzib205G0505 Durio zibethinus HOM05D003381 ORTHO05D003880 1.9e-09 66.2 94 73.4
Lalb_Chr04g0252571 Lupinus albus HOM05D003381 ORTHO05D003880 2.5e-09 65.9 95 45.3
Lsat_1_v5_gn_8_4301 Lactuca sativa HOM05D003381 ORTHO05D003880 4.2e-09 65.1 49 67.3
Oeu055427.1 Olea europaea HOM05D003381 ORTHO05D003880 4.2e-09 65.1 48 72.9
MBI12_g23073_MAGBIO Magnolia biondii HOM05D003381 ORTHO05D003880 5.5e-09 64.7 97 69.1
TAR374G1397 Trochodendron aralioides HOM05D003381 ORTHO05D003880 7.2e-09 64.3 107 45.8
Aqoxy5G04393 Aquilegia oxysepala HOM05D003381 ORTHO05D003880 1.2e-08 63.5 79 51.9
PSO675G1709 Papaver somniferum HOM05D003381 ORTHO05D003880 1.2e-08 63.5 90 47.8
Migut.F00966 Erythranthe guttata HOM05D003381 ORTHO05D003880 1.6e-08 63.2 94 44.7
PSO541G0132 Papaver somniferum HOM05D003381 ORTHO05D003880 1.6e-08 63.2 90 47.8
Manes.01G002300 Manihot esculenta HOM05D003381 ORTHO05D003880 2.1e-08 62.8 84 50.0
Phvul.008G187900 Phaseolus vulgaris HOM05D003381 ORTHO05D003880 2.1e-08 62.8 94 45.7
Psat5g070560 Pisum sativum HOM05D003381 ORTHO05D003880 2.1e-08 62.8 93 48.4
Duzib068G1330 Durio zibethinus HOM05D003381 ORTHO05D003880 2.7e-08 62.4 104 67.3
Peaxi162Scf00685g10014 Petunia axillaris HOM05D003381 ORTHO05D003880 2.7e-08 62.4 48 66.7
EL10Ac3g05129 Beta vulgaris HOM05D003381 ORTHO05D003880 6.1e-08 61.2 116 44.0
Glyma.14G188300 Glycine max HOM05D003381 ORTHO05D003880 6.1e-08 61.2 89 46.1
QL11p009417 Quercus lobata HOM05D003381 ORTHO05D003880 6.1e-08 61.2 88 65.9
CsaV3_5G000160 Cucumis sativus L. HOM05D003381 ORTHO05D003880 7.9e-08 60.8 89 47.2
Lsat_1_v5_gn_2_3421 Lactuca sativa HOM05D003381 ORTHO05D003880 7.9e-08 60.8 116 46.6
unitig_60.g25635 Utricularia gibba HOM05D003381 ORTHO05D003880 1.0e-07 60.5 84 45.2
Ah.13g071060 Amaranthus hybridus HOM05D003381 ORTHO05D003880 1.4e-07 60.1 125 39.2
Sabra15G0000300 Salix brachista HOM05D003381 ORTHO05D003880 1.4e-07 60.1 84 47.6
Sc14g0006700 Simmondsia chinensis HOM05D003381 ORTHO05D003880 1.4e-07 60.1 114 42.1
EL10Ac3g05128 Beta vulgaris HOM05D003381 ORTHO05D003880 1.8e-07 59.7 85 48.2
CAN.G65.142 Capsicum annuum HOM05D003381 ORTHO05D003880 1.8e-07 59.7 40 75.0
Lalb_Chr08g0239391 Lupinus albus HOM05D003381 ORTHO05D003880 1.8e-07 59.7 121 40.5
Ah.13g071070 Amaranthus hybridus HOM05D003381 ORTHO05D003880 2.3e-07 59.3 83 45.8
Thecc.03G212200 Theobroma cacao HOM05D003381 ORTHO05D003880 3.9e-07 58.5 117 64.1
TWI81G0266 Tripterygium wilfordii HOM05D003381 ORTHO05D003880 3.9e-07 58.5 106 43.4
Cpa.g.sc3.189 Carica papaya HOM05D003381 ORTHO05D003880 5.1e-07 58.2 73 46.6
TWI81G0192 Tripterygium wilfordii HOM05D003381 ORTHO05D003880 5.1e-07 58.2 79 49.4
Eucgr.K00529 Eucalyptus grandis HOM05D003381 ORTHO05D003880 6.7e-07 57.8 87 46.0
LjContig00155g0019595 Lotus japonicus HOM05D003381 ORTHO05D003880 6.7e-07 57.8 99 42.4
Lalb_Chr10g0102971 Lupinus albus HOM05D003381 ORTHO05D003880 6.7e-07 57.8 79 44.3
Potri.012G004500 Populus trichocarpa HOM05D003381 ORTHO05D003880 6.7e-07 57.8 83 48.2
Potri.015G000500 Populus trichocarpa HOM05D003381 ORTHO05D003880 6.7e-07 57.8 84 45.2
SGA_v2.0_scaffold44G16873 Striga asiatica HOM05D003381 ORTHO05D003880 8.8e-07 57.4 117 39.3
MBI04_g09823_MAGBIO Magnolia biondii HOM05D003381 ORTHO05D003880 1.5e-06 56.6 118 52.5
Sed0013785 Sechium edule HOM05D003381 ORTHO05D003880 2.6e-06 55.8 96 41.7
SGA_v2.0_scaffold351G49675 Striga asiatica HOM05D003381 ORTHO05D003880 2.6e-06 55.8 86 44.2
PSO017G3293 Papaver somniferum HOM05D003381 ORTHO05D003880 3.3e-06 55.5 85 42.4
Lsat_1_v5_gn_8_4241 Lactuca sativa HOM05D003381 ORTHO05D003880 4.4e-06 55.1 94 45.7
Lalb_Chr11g0067571 Lupinus albus HOM05D003381 ORTHO05D003880 4.4e-06 55.1 80 43.8
HanXRQChr16g0499781 Helianthus annuus HOM05D003381 ORTHO05D003880 7.4e-06 54.3 84 36.9
Sabra12G0000400 Salix brachista HOM05D003381 ORTHO05D003880 9.7e-06 53.9 83 45.8


User provided reference genes

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