Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro05815 Vaccinium macrocarpon HOM05D003353 ORTHO05D003751 0.0e+00 1163.7 587 100.0
Rhsim10G0023100 Rhododendron simsii HOM05D003353 ORTHO05D003751 1.5e-272 942.6 629 77.9
Actinidia06029 Actinidia chinensis HOM05D003353 ORTHO05D003751 2.2e-228 795.8 598 69.6
GSVIVG01032492001 Vitis vinifera HOM05D003353 ORTHO05D003751 8.6e-188 661.0 593 58.0
TAR371G0580 Trochodendron aralioides HOM05D003353 ORTHO05D003751 1.5e-187 660.2 589 59.6
TAR629G0276 Trochodendron aralioides HOM05D003353 ORTHO05D003751 2.9e-183 646.0 589 57.4
QL02p076799 Quercus lobata HOM05D003353 ORTHO05D003751 7.3e-179 631.3 595 58.0
Haze_14661 Corylus avellana HOM05D003353 ORTHO05D003751 1.5e-176 623.6 593 56.8
CiPaw.03G037100 Carya illinoinensis HOM05D003353 ORTHO05D003751 3.7e-175 619.0 593 56.8
Cfa007435 Carpinus fangiana HOM05D003353 ORTHO05D003751 1.1e-171 607.4 593 56.0
Thecc.04G008000 Theobroma cacao HOM05D003353 ORTHO05D003751 2.1e-170 603.2 593 55.0
CiPaw.04G024200 Carya illinoinensis HOM05D003353 ORTHO05D003751 1.2e-168 597.4 599 54.8
Atru.chr6.2192 Acer truncatum HOM05D003353 ORTHO05D003751 2.0e-168 596.7 592 54.1
CANSAT64G0328 Cannabis sativa HOM05D003353 ORTHO05D003751 1.3e-167 594.0 593 54.5
Ciclev10014026m.g Citrus clementina HOM05D003353 ORTHO05D003751 7.1e-166 588.2 597 54.8
Duzib147G1510 Durio zibethinus HOM05D003353 ORTHO05D003751 3.5e-165 585.9 591 54.0
Lj7A591T75 Lonicera japonica HOM05D003353 ORTHO05D003751 3.5e-165 585.9 583 54.0
COL.COLO4_28936 Corchorus olitorius HOM05D003353 ORTHO05D003751 2.5e-163 579.7 591 53.6
Glyma.13G170000 Glycine max HOM05D003353 ORTHO05D003751 2.1e-162 576.6 587 53.8
TWI36G0997 Tripterygium wilfordii HOM05D003353 ORTHO05D003751 2.8e-162 576.2 589 53.5
Nn4g22812 Nelumbo nucifera HOM05D003353 ORTHO05D003751 8.1e-162 574.7 593 54.3
GSVIVG01020232001 Vitis vinifera HOM05D003353 ORTHO05D003751 2.3e-161 573.2 596 53.5
RcHm_v2.0_Chr2g0171081 Rosa chinensis HOM05D003353 ORTHO05D003751 3.1e-161 572.8 591 53.1
Lj2g0012220 Lotus japonicus HOM05D003353 ORTHO05D003751 5.2e-161 572.0 589 54.0
Dinv15308 Davidia involucrata HOM05D003353 ORTHO05D003751 1.5e-160 570.5 597 54.3
FAN09G4608 Fragaria x ananassa HOM05D003353 ORTHO05D003751 1.5e-160 570.5 591 52.5
MD17G1035500 Malus domestica HOM05D003353 ORTHO05D003751 3.4e-160 569.3 592 52.5
MD09G1035200 Malus domestica HOM05D003353 ORTHO05D003751 4.4e-160 568.9 590 52.5
TWI12G0214 Tripterygium wilfordii HOM05D003353 ORTHO05D003751 4.4e-160 568.9 595 52.3
Prupe.3G283100 Prunus persica HOM05D003353 ORTHO05D003751 5.8e-160 568.5 591 52.6
Lalb_Chr02g0160231 Lupinus albus HOM05D003353 ORTHO05D003751 9.9e-160 567.8 591 52.6
FvH4_6g50560 Fragaria vesca HOM05D003353 ORTHO05D003751 1.7e-159 567.0 590 52.2
FAN14G4206 Fragaria x ananassa HOM05D003353 ORTHO05D003751 2.9e-159 566.2 590 52.2
Phvul.004G017600 Phaseolus vulgaris HOM05D003353 ORTHO05D003751 2.9e-159 566.2 589 52.8
Lalb_Chr21g0319411 Lupinus albus HOM05D003353 ORTHO05D003751 4.9e-159 565.5 593 52.3
Nn3g16906 Nelumbo nucifera HOM05D003353 ORTHO05D003751 4.9e-159 565.5 596 53.4
VMungo0464G0152 Vigna mungo HOM05D003353 ORTHO05D003751 8.4e-159 564.7 591 52.8
Gohir.D09G025300 Gossypium hirsutum HOM05D003353 ORTHO05D003751 1.1e-158 564.3 593 52.8
Gorai.006G029600 Gossypium raimondii HOM05D003353 ORTHO05D003751 1.1e-158 564.3 593 52.8
Glyma.19G010200 Glycine max HOM05D003353 ORTHO05D003751 5.4e-158 562.0 587 53.0
Gohir.A09G026000 Gossypium hirsutum HOM05D003353 ORTHO05D003751 5.4e-158 562.0 593 52.8
Lalb_Chr06g0176091 Lupinus albus HOM05D003353 ORTHO05D003751 9.2e-158 561.2 592 52.4
Psat1g059480 Pisum sativum HOM05D003353 ORTHO05D003751 4.6e-157 558.9 596 52.2
FAN02G2799 Fragaria x ananassa HOM05D003353 ORTHO05D003751 1.7e-156 557.0 591 51.6
Dinv24865 Davidia involucrata HOM05D003353 ORTHO05D003751 5.1e-156 555.4 597 52.9
THA.LOC104822384 Tarenaya hassleriana HOM05D003353 ORTHO05D003751 5.8e-152 542.0 590 50.8
Sed0022584 Sechium edule HOM05D003353 ORTHO05D003751 2.2e-151 540.0 595 48.7
TPR.G2281 Trifolium pratense HOM05D003353 ORTHO05D003751 2.2e-151 540.0 592 51.7
Manes.15G182800 Manihot esculenta HOM05D003353 ORTHO05D003751 4.9e-151 538.9 593 51.6
Medtr6g007650 Medicago truncatula HOM05D003353 ORTHO05D003751 3.2e-150 536.2 589 50.9
ClCG10G014330 Citrullus lanatus HOM05D003353 ORTHO05D003751 2.7e-149 533.1 593 49.6
EL10Ac2g03352 Beta vulgaris HOM05D003353 ORTHO05D003751 1.7e-148 530.4 597 49.6
MELO3C009946.2 Cucumis melo HOM05D003353 ORTHO05D003751 3.6e-146 522.7 592 48.3
AT3G01460 Arabidopsis thaliana HOM05D003353 ORTHO05D003751 2.4e-145 520.0 594 49.3
CsaV3_3G042270 Cucumis sativus L. HOM05D003353 ORTHO05D003751 4.0e-145 519.2 592 48.3
ATR0691G050 Amborella trichopoda HOM05D003353 ORTHO05D003751 5.3e-145 518.8 597 49.7
Thhalv10019872m.g Eutrema salsugineum HOM05D003353 ORTHO05D003751 7.6e-144 515.0 602 49.5
Sp3g00610 Schrenkiella parvula HOM05D003353 ORTHO05D003751 7.6e-144 515.0 594 49.7
BcaB04g21418 Brassica carinata HOM05D003353 ORTHO05D003751 4.9e-143 512.3 594 49.2
Aqoxy3G02993 Aquilegia oxysepala HOM05D003353 ORTHO05D003751 1.1e-142 511.1 600 49.0
Atru.chr11.2012 Acer truncatum HOM05D003353 ORTHO05D003751 1.4e-142 510.8 598 48.8
Eucgr.I01818 Eucalyptus grandis HOM05D003353 ORTHO05D003751 3.2e-142 509.6 590 49.0
Aa31LG5G10560 Aethionema arabicum HOM05D003353 ORTHO05D003751 7.1e-142 508.4 600 48.2
AL3G10710 Arabidopsis lyrata HOM05D003353 ORTHO05D003751 7.1e-142 508.4 600 49.2
Thhalv10022520m.g Eutrema salsugineum HOM05D003353 ORTHO05D003751 1.2e-141 507.7 594 49.2
BcaC09g47659 Brassica carinata HOM05D003353 ORTHO05D003751 2.1e-141 506.9 601 49.3
BNapus_Darmor_BZH_scaffold_119p00030 Brassica napus HOM05D003353 ORTHO05D003751 3.5e-141 506.1 594 49.3
BNapus_Darmor_BZH_scaffold_97p00400 Brassica napus HOM05D003353 ORTHO05D003751 3.5e-141 506.1 594 49.3
Carub.0003s0064 Capsella rubella HOM05D003353 ORTHO05D003751 2.3e-140 503.4 594 48.0
AUR62032109 Chenopodium quinoa HOM05D003353 ORTHO05D003751 8.7e-140 501.5 597 48.6
PSO063G6215 Papaver somniferum HOM05D003353 ORTHO05D003751 1.5e-139 500.7 596 48.3
Sc06g0001590 Simmondsia chinensis HOM05D003353 ORTHO05D003751 1.5e-139 500.7 597 48.1
PSO832G1186 Papaver somniferum HOM05D003353 ORTHO05D003751 4.3e-139 499.2 596 48.2
BolC5t35150H Brassica oleracea HOM05D003353 ORTHO05D003751 9.6e-139 498.0 604 49.0
BraA01t04666Z Brassica rapa HOM05D003353 ORTHO05D003751 9.6e-139 498.0 606 48.3
BolC1t05958H Brassica oleracea HOM05D003353 ORTHO05D003751 1.6e-138 497.3 613 48.3
A05p44550 Brassica napus HOM05D003353 ORTHO05D003751 2.8e-138 496.5 602 49.0
C09p75140 Brassica napus HOM05D003353 ORTHO05D003751 2.8e-138 496.5 604 48.8
BraA05t23202Z Brassica rapa HOM05D003353 ORTHO05D003751 3.6e-138 496.1 602 49.0
AUR62042408 Chenopodium quinoa HOM05D003353 ORTHO05D003751 8.1e-138 495.0 597 47.7
Ah.16g106640 Amaranthus hybridus HOM05D003353 ORTHO05D003751 1.1e-137 494.6 601 48.1
arahy.Tifrunner.gnm1.ann1.S45US4 Arachis hypogaea HOM05D003353 ORTHO05D003751 2.4e-137 493.4 589 48.9
PGR142G1415 Punica granatum HOM05D003353 ORTHO05D003751 2.4e-137 493.4 593 47.7
Nitab4.5_0002579g0080 Nicotiana tabacum HOM05D003353 ORTHO05D003751 4.0e-137 492.7 593 45.9
Hund12469 Selenicereus undatus HOM05D003353 ORTHO05D003751 3.4e-136 489.6 591 47.9
CDE10G0339 Ceratophyllum demersum HOM05D003353 ORTHO05D003751 1.7e-135 487.3 598 45.8
Nitab4.5_0000113g0210 Nicotiana tabacum HOM05D003353 ORTHO05D003751 3.8e-135 486.1 593 45.7
Ciclev10030471m.g Citrus clementina HOM05D003353 ORTHO05D003751 9.3e-134 481.5 595 46.2
Manes.12G029600 Manihot esculenta HOM05D003353 ORTHO05D003751 1.6e-133 480.7 590 45.3
MSTRG.7892 Avicennia marina HOM05D003353 ORTHO05D003751 2.7e-133 479.9 585 47.2
Cc11_g14600 Coffea canephora HOM05D003353 ORTHO05D003751 1.0e-132 478.0 589 45.3
DCAR_031098 Daucus carota HOM05D003353 ORTHO05D003751 3.0e-132 476.5 595 46.2
DCAR_021679 Daucus carota HOM05D003353 ORTHO05D003751 9.6e-131 471.5 595 46.7
Cfa009137 Carpinus fangiana HOM05D003353 ORTHO05D003751 1.6e-130 470.7 597 47.1
Peaxi162Scf00338g00002 Petunia axillaris HOM05D003353 ORTHO05D003751 2.8e-130 469.9 593 44.4
Sabra17G0060500 Salix brachista HOM05D003353 ORTHO05D003751 3.7e-130 469.5 598 46.8
DCAR_007093 Daucus carota HOM05D003353 ORTHO05D003751 1.4e-129 467.6 594 47.5
Rhsim12G0121100 Rhododendron simsii HOM05D003353 ORTHO05D003751 2.0e-128 463.8 594 44.9
CAN.G1420.2 Capsicum annuum HOM05D003353 ORTHO05D003751 4.5e-128 462.6 593 44.4
Haze_12169 Corylus avellana HOM05D003353 ORTHO05D003751 4.5e-128 462.6 596 46.1
Actinidia15041 Actinidia chinensis HOM05D003353 ORTHO05D003751 7.6e-128 461.8 594 44.3
Lj6C805G5 Lonicera japonica HOM05D003353 ORTHO05D003751 2.5e-126 456.8 610 45.4
QL03p061451 Quercus lobata HOM05D003353 ORTHO05D003751 1.2e-125 454.5 594 44.8
Oeu056394.4 Olea europaea HOM05D003353 ORTHO05D003751 3.5e-125 453.0 596 44.3
Migut.L01407 Erythranthe guttata HOM05D003353 ORTHO05D003751 4.6e-125 452.6 584 45.4
HPP92_008854 Vanilla planifolia HOM05D003353 ORTHO05D003751 1.8e-124 450.7 600 45.3
Sopen05g001650 Solanum pennellii HOM05D003353 ORTHO05D003751 9.6e-123 444.9 593 42.3
SGA_v2.0_scaffold165G38252 Striga asiatica HOM05D003353 ORTHO05D003751 1.4e-121 441.0 594 43.6
SHI25551 Sapria himalayana HOM05D003353 ORTHO05D003751 6.9e-121 438.7 608 45.4
CSS0024625 Camellia sinensis var. sinensis HOM05D003353 ORTHO05D003751 7.2e-118 428.7 537 46.9
ECA233G2073 Erigeron canadensis HOM05D003353 ORTHO05D003751 6.1e-117 425.6 592 43.6
SEGI_35053 Sequoiadendron giganteum HOM05D003353 ORTHO05D003751 3.9e-116 422.9 608 42.3
HanXRQChr12g0368561 Helianthus annuus HOM05D003353 ORTHO05D003751 2.5e-115 420.2 584 42.8
BNapus_Darmor_BZH_scaffold_133p00020 Brassica napus HOM05D003353 ORTHO05D003751 4.1e-113 412.9 512 47.7
Dinv35052 Davidia involucrata HOM05D003353 ORTHO05D003751 2.1e-109 400.6 376 57.2
Lsat_1_v5_gn_8_157680 Lactuca sativa HOM05D003353 ORTHO05D003751 7.9e-109 398.7 593 41.5
vmacro16257 Vaccinium macrocarpon HOM05D003353 ORTHO05D003751 3.7e-106 389.8 536 44.6
Cpa.g.sc215.7 Carica papaya HOM05D003353 ORTHO05D003751 2.4e-105 387.1 441 49.2
Potri.017G072580 Populus trichocarpa HOM05D003353 ORTHO05D003751 2.2e-95 354.0 445 46.3
Oeu003445.1 Olea europaea HOM05D003353 ORTHO05D003751 5.5e-94 349.4 448 45.8
Lsat_1_v5_gn_4_6960 Lactuca sativa HOM05D003353 ORTHO05D003751 8.0e-93 345.5 582 38.7
ECA199G0007 Erigeron canadensis HOM05D003353 ORTHO05D003751 2.9e-87 327.0 582 38.5
HanXRQChr17g0569791 Helianthus annuus HOM05D003353 ORTHO05D003751 4.2e-86 323.2 595 36.3
Lsat_1_v5_gn_4_182161 Lactuca sativa HOM05D003353 ORTHO05D003751 6.3e-74 282.7 588 36.1
Lsat_1_v5_gn_4_181301 Lactuca sativa HOM05D003353 ORTHO05D003751 5.4e-73 279.6 588 36.2
Aqoxy3G00985 Aquilegia oxysepala HOM05D003353 ORTHO05D003751 5.6e-70 269.6 408 40.2
Zm00001eb206240 Zea mays HOM05D003353 ORTHO05D003751 8.3e-66 255.8 590 32.2
unitig_26.g10338 Utricularia gibba HOM05D003353 ORTHO05D003751 1.1e-65 255.4 511 34.4
Mapoly0064s0056 Marchantia polymorpha HOM05D003353 ORTHO05D003751 1.1e-62 245.4 700 30.7
Dinv35053 Davidia involucrata HOM05D003353 ORTHO05D003751 1.2e-61 241.9 158 75.9
TPR.G2296 Trifolium pratense HOM05D003353 ORTHO05D003751 2.3e-60 237.7 405 39.3
CSS0032060 Camellia sinensis var. sinensis HOM05D003353 ORTHO05D003751 5.8e-59 233.0 320 44.4
Pp3c6_8120 Physcomitrium patens HOM05D003353 ORTHO05D003751 3.6e-53 213.8 476 32.8
Pp3c5_19640 Physcomitrium patens HOM05D003353 ORTHO05D003751 1.8e-52 211.5 468 33.3
ECA232G4683 Erigeron canadensis HOM05D003353 ORTHO05D003751 3.0e-47 194.1 416 33.9
AagrBONN_evm.TU.Sc2ySwM_228.4332 Anthoceros agrestis HOM05D003353 ORTHO05D003751 3.3e-46 190.7 636 27.0
HanXRQChr09g0266041 Helianthus annuus HOM05D003353 ORTHO05D003751 2.8e-45 187.6 419 31.3
Pp3c2_35750 Physcomitrium patens HOM05D003353 ORTHO05D003751 1.4e-44 185.3 523 30.8
Lsat_1_v5_gn_4_181221 Lactuca sativa HOM05D003353 ORTHO05D003751 2.6e-43 181.0 411 37.0
Pp3c1_860 Physcomitrium patens HOM05D003353 ORTHO05D003751 7.1e-41 172.9 290 38.6
Migut.H00131 Erythranthe guttata HOM05D003353 ORTHO05D003751 1.1e-38 165.6 404 32.9
Migut.H00132 Erythranthe guttata HOM05D003353 ORTHO05D003751 3.6e-37 160.6 236 41.5
Potri.017G072460 Populus trichocarpa HOM05D003353 ORTHO05D003751 5.2e-36 156.8 115 72.2
Migut.H00129 Erythranthe guttata HOM05D003353 ORTHO05D003751 2.6e-35 154.5 404 31.7
Lalb_Chr14g0362821 Lupinus albus HOM05D003353 ORTHO05D003751 4.8e-29 133.7 124 58.1
Lalb_Chr14g0362801 Lupinus albus HOM05D003353 ORTHO05D003751 2.4e-28 131.3 99 66.7
PSO732G0719 Papaver somniferum HOM05D001944 ORTHO05D002405 7.6e-27 126.3 94 67.0
Actinidia13514 Actinidia chinensis HOM05D003353 ORTHO05D003751 4.2e-25 120.6 130 51.5
Carub.0001s0467 Capsella rubella HOM05D003353 ORTHO05D003751 9.3e-25 119.4 146 45.2
CSS0024289 Camellia sinensis var. sinensis HOM05D003353 ORTHO05D003751 7.4e-22 109.8 91 57.1
SEGI_30620 Sequoiadendron giganteum HOM05D004258 ORTHO05D005163 5.7e-06 57.0 75 40.0


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