Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro04869 Vaccinium macrocarpon HOM05D002510 ORTHO05D006928 4.0e-156 554.7 273 100.0
Dinv31320 Davidia involucrata HOM05D002510 ORTHO05D006928 5.2e-103 378.3 279 69.2
Actinidia06769 Actinidia chinensis HOM05D002510 ORTHO05D006928 6.3e-101 371.3 285 67.7
CSS0041581 Camellia sinensis var. sinensis HOM05D002510 ORTHO05D006928 1.9e-97 359.8 282 65.2
GSVIVG01016268001 Vitis vinifera HOM05D002510 ORTHO05D006928 2.1e-96 356.3 271 66.8
CSS0006577 Camellia sinensis var. sinensis HOM05D002510 ORTHO05D006928 2.7e-96 355.9 282 64.5
DCAR_019102 Daucus carota HOM05D002510 ORTHO05D006928 4.7e-96 355.1 271 66.1
Duzib114G0372 Durio zibethinus HOM05D002510 ORTHO05D006928 6.1e-96 354.8 281 64.1
Lj5g0027397 Lotus japonicus HOM05D002510 ORTHO05D006928 8.0e-96 354.4 270 64.8
Potri.008G039300 Populus trichocarpa HOM05D002510 ORTHO05D006928 8.0e-96 354.4 285 63.9
Haze_16887 Corylus avellana HOM05D002510 ORTHO05D006928 1.0e-95 354.0 289 63.3
Actinidia38854 Actinidia chinensis HOM05D002510 ORTHO05D006928 3.0e-95 352.4 280 65.0
Glyma.10G210800 Glycine max HOM05D002510 ORTHO05D006928 6.7e-95 351.3 281 64.4
Glyma.20G179800 Glycine max HOM05D002510 ORTHO05D006928 6.7e-95 351.3 281 64.8
Manes.07G100200 Manihot esculenta HOM05D002510 ORTHO05D006928 1.2e-94 350.5 244 69.7
Prupe.2G213200 Prunus persica HOM05D002510 ORTHO05D006928 1.5e-94 350.1 296 61.8
arahy.Tifrunner.gnm1.ann1.D0MVTX Arachis hypogaea HOM05D002510 ORTHO05D006928 3.3e-94 349.0 277 64.3
Psat6g183480 Pisum sativum HOM05D002510 ORTHO05D006928 3.3e-94 349.0 278 63.3
Thecc.10G074800 Theobroma cacao HOM05D002510 ORTHO05D006928 4.4e-94 348.6 244 70.1
MD01G1108300 Malus domestica HOM05D002510 ORTHO05D006928 1.3e-93 347.1 261 65.5
Potri.010G222900 Populus trichocarpa HOM05D002510 ORTHO05D006928 1.3e-93 347.1 275 64.0
RcHm_v2.0_Chr1g0363321 Rosa chinensis HOM05D002510 ORTHO05D006928 1.3e-93 347.1 281 62.3
CSS0017911 Camellia sinensis var. sinensis HOM05D002510 ORTHO05D006928 1.7e-93 346.7 229 73.8
Gohir.A10G205600 Gossypium hirsutum HOM05D002510 ORTHO05D006928 1.7e-93 346.7 230 72.6
Lj1C913T4 Lonicera japonica HOM05D002510 ORTHO05D006928 1.7e-93 346.7 283 62.2
TAR369G0428 Trochodendron aralioides HOM05D002510 ORTHO05D006928 1.7e-93 346.7 284 63.7
arahy.Tifrunner.gnm1.ann1.B5KM0B Arachis hypogaea HOM05D002510 ORTHO05D006928 2.2e-93 346.3 276 64.5
Medtr1g095000 Medicago truncatula HOM05D002510 ORTHO05D006928 2.2e-93 346.3 278 62.9
Sabra08G0027000 Salix brachista HOM05D002510 ORTHO05D006928 1.8e-92 343.2 224 73.7
Duzib128G0305 Durio zibethinus HOM05D002510 ORTHO05D006928 2.4e-92 342.8 280 62.1
Eucgr.G02836 Eucalyptus grandis HOM05D002510 ORTHO05D006928 2.4e-92 342.8 271 63.5
Ca_10569_v3 Cicer arietinum L. HOM05D002800 ORTHO05D008563 4.1e-92 342.0 223 74.0
FAN01G2940 Fragaria x ananassa HOM05D002510 ORTHO05D007210 7.0e-92 341.3 282 61.7
MD07G1174400 Malus domestica HOM05D002510 ORTHO05D006928 7.0e-92 341.3 265 64.2
Phvul.007G094800 Phaseolus vulgaris HOM05D002510 ORTHO05D006928 7.0e-92 341.3 275 62.9
QL08p055746 Quercus lobata HOM05D002510 ORTHO05D006928 7.0e-92 341.3 289 61.2
EL10Ac3g05855 Beta vulgaris HOM05D002510 ORTHO05D006928 1.2e-91 340.5 268 62.3
CiPaw.01G272400 Carya illinoinensis HOM05D002510 ORTHO05D006928 1.6e-91 340.1 262 64.9
FAN03G1741 Fragaria x ananassa HOM05D002510 ORTHO05D006928 1.6e-91 340.1 284 61.6
FAN06G0282 Fragaria x ananassa HOM05D002510 ORTHO05D006928 1.6e-91 340.1 284 60.6
Gorai.011G239300 Gossypium raimondii HOM05D002510 ORTHO05D006928 2.0e-91 339.7 281 63.3
Oeu031347.1 Olea europaea HOM05D002510 ORTHO05D006928 2.7e-91 339.3 272 64.0
FvH4_7g19440 Fragaria vesca HOM05D002510 ORTHO05D006928 3.5e-91 339.0 284 60.9
Lalb_Chr02g0142201 Lupinus albus HOM05D002510 ORTHO05D006928 7.7e-91 337.8 278 61.2
TWI15G0405 Tripterygium wilfordii HOM05D002510 ORTHO05D006928 1.3e-90 337.0 275 64.7
Gohir.D10G213800 Gossypium hirsutum HOM05D002510 ORTHO05D006928 2.2e-90 336.3 226 72.6
Lsat_1_v5_gn_2_112320 Lactuca sativa HOM05D002510 ORTHO05D006928 3.8e-90 335.5 274 62.8
Lalb_Chr06g0162351 Lupinus albus HOM05D002510 ORTHO05D006928 6.5e-90 334.7 253 65.2
TAR623G0044 Trochodendron aralioides HOM05D002510 ORTHO05D006928 6.5e-90 334.7 290 62.1
FAN10G3768 Fragaria x ananassa HOM05D002510 ORTHO05D007210 1.1e-89 334.0 281 61.2
HanXRQChr14g0456861 Helianthus annuus HOM05D002510 ORTHO05D006928 1.1e-89 334.0 272 62.5
MSTRG.9172 Avicennia marina HOM05D002510 ORTHO05D006928 1.5e-89 333.6 235 69.8
FAN10G0968 Fragaria x ananassa HOM05D002510 ORTHO05D007210 2.5e-89 332.8 285 61.1
Sabra10G0172300 Salix brachista HOM05D002510 ORTHO05D006928 1.2e-88 330.5 223 72.2
PGR142G1169 Punica granatum HOM05D002510 ORTHO05D006928 1.6e-88 330.1 269 62.8
Hund12054 Selenicereus undatus HOM05D002510 ORTHO05D006928 2.7e-88 329.3 233 68.2
ClCG08G007520 Citrullus lanatus HOM05D002510 ORTHO05D006928 8.0e-88 327.8 258 64.7
MELO3C019798.2 Cucumis melo HOM05D002510 ORTHO05D006928 8.0e-88 327.8 234 67.9
CsaV3_6G036450 Cucumis sativus L. HOM05D002510 ORTHO05D006928 8.0e-88 327.8 234 67.9
Cc02_g11320 Coffea canephora HOM05D002510 ORTHO05D006928 2.3e-87 326.2 252 65.9
Ciclev10032329m.g Citrus clementina HOM05D002510 ORTHO05D006928 3.0e-87 325.9 286 59.8
PGSC0003DMG400033889 Solanum tuberosum HOM05D002510 ORTHO05D006928 3.0e-87 325.9 262 63.0
Ah.10g032650 Amaranthus hybridus HOM05D002510 ORTHO05D006928 4.0e-87 325.5 226 69.9
Nn2g10810 Nelumbo nucifera HOM05D002510 ORTHO05D006928 4.0e-87 325.5 224 69.2
Sc20g0001820 Simmondsia chinensis HOM05D002510 ORTHO05D006928 4.0e-87 325.5 263 62.7
CAN.G131.8 Capsicum annuum HOM05D002510 ORTHO05D006928 5.2e-87 325.1 271 63.1
AUR62037755 Chenopodium quinoa HOM05D002510 ORTHO05D006928 8.8e-87 324.3 235 66.8
Migut.F01984 Erythranthe guttata HOM05D002510 ORTHO05D006928 8.8e-87 324.3 259 62.2
Nitab4.5_0001053g0060 Nicotiana tabacum HOM05D002510 ORTHO05D006928 1.5e-86 323.6 278 60.4
THA.LOC104827063 Tarenaya hassleriana HOM05D002510 ORTHO05D006928 1.5e-86 323.6 252 63.5
Nitab4.5_0002524g0010 Nicotiana tabacum HOM05D002510 ORTHO05D006928 2.6e-86 322.8 278 59.7
Atru.chr12.758 Acer truncatum HOM05D002510 ORTHO05D006928 4.4e-86 322.0 276 60.5
AUR62018249 Chenopodium quinoa HOM05D002510 ORTHO05D006928 3.7e-85 318.9 264 61.4
Glyma.02G074000 Glycine max HOM05D002510 ORTHO05D006928 3.7e-85 318.9 259 61.8
Sp4g21360 Schrenkiella parvula HOM05D002510 ORTHO05D006928 1.1e-84 317.4 234 65.4
PSO063G7611 Papaver somniferum HOM05D002510 ORTHO05D006928 2.4e-84 316.2 276 59.4
Carub.0004s2104 Capsella rubella HOM05D002510 ORTHO05D006928 7.0e-84 314.7 260 61.2
Sed0007153 Sechium edule HOM05D002510 ORTHO05D006928 7.0e-84 314.7 226 66.8
PSO339G5277 Papaver somniferum HOM05D002510 ORTHO05D006928 9.1e-84 314.3 277 59.9
Aqoxy1G01228 Aquilegia oxysepala HOM05D002510 ORTHO05D006928 1.6e-83 313.5 266 61.3
AL4G36300 Arabidopsis lyrata HOM05D002510 ORTHO05D006928 1.6e-83 313.5 220 68.2
AT2G39000 Arabidopsis thaliana HOM05D002510 ORTHO05D006928 3.5e-83 312.4 225 67.1
Thhalv10017009m.g Eutrema salsugineum HOM05D002510 ORTHO05D006928 5.9e-83 311.6 223 66.4
Rhsim03G0120400 Rhododendron simsii HOM05D002510 ORTHO05D006928 5.9e-83 311.6 228 67.1
C04p67010 Brassica napus HOM05D002510 ORTHO05D006928 7.7e-83 311.2 238 63.4
BolC4t28203H Brassica oleracea HOM05D002510 ORTHO05D006928 7.7e-83 311.2 238 63.4
Lalb_Chr03g0035921 Lupinus albus HOM05D002510 ORTHO05D006928 2.9e-82 309.3 260 61.5
BcaC02g12914 Brassica carinata HOM05D002510 ORTHO05D006928 5.0e-82 308.5 226 65.0
VMungo1197G0001 Vigna mungo HOM05D002510 ORTHO05D006928 1.9e-81 306.6 259 57.9
CARHR133780 Cardamine hirsuta HOM05D002510 ORTHO05D006928 2.5e-81 306.2 267 59.2
Phvul.004G083200 Phaseolus vulgaris HOM05D002510 ORTHO05D006928 2.3e-79 299.7 259 58.7
BraA04t18437Z Brassica rapa HOM05D002510 ORTHO05D006928 3.0e-79 299.3 224 62.9
Lj3g0006441 Lotus japonicus HOM05D002510 ORTHO05D006928 3.0e-79 299.3 222 65.8
TPR.G1934 Trifolium pratense HOM05D002510 ORTHO05D006928 1.5e-78 297.0 249 61.8
A04p29730 Brassica napus HOM05D002510 ORTHO05D006928 1.2e-75 287.3 247 57.5
SGA_v2.0_scaffold62G21410 Striga asiatica HOM05D002510 ORTHO05D006928 1.2e-75 287.3 268 56.0
VMungo0464G1224 Vigna mungo HOM05D002510 ORTHO05D006928 6.6e-74 281.6 251 59.0
HPP92_014717 Vanilla planifolia HOM05D002510 ORTHO05D006928 1.5e-73 280.4 255 56.1
arahy.Tifrunner.gnm1.ann1.DB5KD4 Arachis hypogaea HOM05D002510 ORTHO05D006928 1.2e-72 277.3 272 52.2
ECA238G3090 Erigeron canadensis HOM05D002510 ORTHO05D006928 2.1e-72 276.6 258 57.0
Migut.F01753 Erythranthe guttata HOM05D002510 ORTHO05D006928 8.0e-72 274.6 270 56.3
arahy.Tifrunner.gnm1.ann1.L5PTYD Arachis hypogaea HOM05D002510 ORTHO05D006928 1.0e-71 274.2 272 51.8
CDE04G1444 Ceratophyllum demersum HOM05D002510 ORTHO05D006928 1.4e-71 273.9 248 58.1
Lj3g0019343 Lotus japonicus HOM05D002510 ORTHO05D006928 3.1e-71 272.7 267 55.4
ATR0048G011 Amborella trichopoda HOM05D002510 ORTHO05D006928 1.2e-70 270.8 248 56.0
Dinv36437 Davidia involucrata HOM05D002510 ORTHO05D006928 3.2e-68 262.7 220 65.5
SalBow4G2249 Salvia bowleyana HOM05D002510 ORTHO05D006928 1.2e-67 260.8 235 55.7
Peaxi162Scf01719g00013 Petunia axillaris HOM05D002510 ORTHO05D006928 1.0e-66 257.7 263 52.9
Cpa.g.sc53.85 Carica papaya HOM05D002510 ORTHO05D006928 3.0e-66 256.1 178 71.3
Gohir.D10G213900 Gossypium hirsutum HOM05D002510 ORTHO05D006928 3.0e-66 256.1 166 74.1
Os02g0806000 Oryza sativa ssp. japonica HOM05D002510 ORTHO05D006928 1.9e-65 253.4 220 55.9
unitig_88.g27817 Utricularia gibba HOM05D002510 ORTHO05D006928 8.0e-64 248.1 224 55.4
SEGI_15474 Sequoiadendron giganteum HOM05D002510 ORTHO05D006928 1.7e-61 240.4 227 53.3
Atru.chr12.782 Acer truncatum HOM05D002510 ORTHO05D006928 1.4e-60 237.3 178 65.2
Gohir.A10G205500 Gossypium hirsutum HOM05D002510 ORTHO05D006928 2.4e-60 236.5 167 71.3
SalBow3G0053 Salvia bowleyana HOM05D002510 ORTHO05D006928 1.7e-58 230.3 162 64.8
Oeu014386.1 Olea europaea HOM05D002510 ORTHO05D006928 2.5e-57 226.5 160 66.9
vmacro07070 Vaccinium macrocarpon HOM05D002510 ORTHO05D006928 1.4e-55 220.7 192 64.1
CAN.G790.5 Capsicum annuum HOM05D002510 ORTHO05D006928 8.9e-47 191.4 138 66.7
Mapoly0033s0159 Marchantia polymorpha HOM05D002510 ORTHO05D006928 1.1e-44 184.5 217 43.3
CDE06G2540 Ceratophyllum demersum HOM05D002510 ORTHO05D006928 4.2e-44 182.6 152 60.5
Aa31LG5G20680 Aethionema arabicum HOM05D002510 ORTHO05D006928 9.3e-44 181.4 133 66.2
SMO134G0014 Selaginella moellendorffii HOM05D002510 ORTHO05D006928 4.4e-38 162.5 204 43.1
Sopen04g011630 Solanum pennellii HOM05D002510 ORTHO05D006928 4.9e-37 159.1 133 60.2
Solyc04g025240.2 Solanum lycopersicum HOM05D002510 ORTHO05D006928 3.2e-36 156.4 138 55.8
Glyma.16G155400 Glycine max HOM05D002510 ORTHO05D006928 1.2e-35 154.5 174 51.1
Lj2g0015916 Lotus japonicus HOM05D002510 ORTHO05D006928 3.0e-34 149.8 171 50.9
Zm00001eb172140 Zea mays HOM05D002510 ORTHO05D006928 1.1e-33 147.9 166 47.0
Solyc04g025230.1 Solanum lycopersicum HOM05D002510 ORTHO05D006928 2.1e-27 127.1 90 65.6
Haze_18780 Corylus avellana HOM05D000278 ORTHO05D005754 1.9e-20 104.0 133 45.1
Actinidia32448 Actinidia chinensis HOM05D002510 ORTHO05D006928 1.1e-17 94.7 80 58.8
Ciclev10024578m.g Citrus clementina HOM05D002510 ORTHO05D006928 3.7e-16 89.7 91 50.5
AagrBONN_evm.TU.Sc2ySwM_117.96 Anthoceros agrestis HOM05D000001 ORTHO05D000003 9.0e-15 85.1 128 41.4
Nn3g20716 Nelumbo nucifera HOM05D002510 ORTHO05D006928 1.4e-12 77.8 132 40.2
Cre16.g662650 Chlamydomonas reinhardtii HOM05D002510 ORTHO05D006928 9.3e-12 75.1 292 27.1
PRCOL_00005349 Prasinoderma coloniale HOM05D002510 ORTHO05D006928 2.7e-11 73.6 77 51.9
A03p21800 Brassica napus HOM05D002510 ORTHO05D006928 3.9e-10 69.7 41 68.3
MCO13G231 Micromonas commoda HOM05D005733 ORTHO05D006928 2.8e-08 63.5 87 37.9


User provided reference genes

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