Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro04194 Vaccinium macrocarpon HOM05D007860 ORTHO05D009950 4.2e-83 311.2 149 100.0
TWI63G0334 Tripterygium wilfordii HOM05D007860 ORTHO05D009950 8.1e-18 94.4 60 66.7
Nn4g22694 Nelumbo nucifera HOM05D007860 ORTHO05D009950 2.4e-17 92.8 60 68.3
CiPaw.01G286200 Carya illinoinensis HOM05D007860 ORTHO05D009950 4.0e-17 92.0 61 67.2
Cfa009596 Carpinus fangiana HOM05D007860 ORTHO05D009950 5.3e-17 91.7 61 68.9
Lsat_1_v5_gn_8_15760 Lactuca sativa HOM05D007860 ORTHO05D009950 5.3e-17 91.7 60 70.0
CiPaw.01G285600 Carya illinoinensis HOM05D007860 ORTHO05D009950 2.6e-16 89.4 61 65.6
Thecc.10G043200 Theobroma cacao HOM05D007860 ORTHO05D009950 4.5e-16 88.6 62 64.5
CDE08G0617 Ceratophyllum demersum HOM05D007860 ORTHO05D009950 7.6e-16 87.8 60 65.0
Glyma.02G092000 Glycine max HOM05D007860 ORTHO05D009950 7.6e-16 87.8 61 63.9
Prupe.1G341800 Prunus persica HOM05D007860 ORTHO05D009950 7.6e-16 87.8 62 64.5
Aa31LG3G410 Aethionema arabicum HOM05D007860 ORTHO05D009950 2.2e-15 86.3 60 61.7
CAN.G786.12 Capsicum annuum HOM05D007860 ORTHO05D009950 6.4e-15 84.7 61 65.6
Glyma.18G290700 Glycine max HOM05D007860 ORTHO05D009950 8.4e-15 84.3 61 60.7
Phvul.008G011200 Phaseolus vulgaris HOM05D007860 ORTHO05D009950 8.4e-15 84.3 61 62.3
Aqoxy4G02946 Aquilegia oxysepala HOM05D007860 ORTHO05D009950 1.1e-14 84.0 62 66.1
Cc02_g07910 Coffea canephora HOM05D007860 ORTHO05D009950 1.1e-14 84.0 62 64.5
DCAR_011692 Daucus carota HOM05D007860 ORTHO05D009950 1.1e-14 84.0 59 64.4
MBI05_g22876_MAGBIO Magnolia biondii HOM05D007860 ORTHO05D009950 1.1e-14 84.0 45 80.0
HanXRQChr08g0220681 Helianthus annuus HOM05D007860 ORTHO05D009950 1.4e-14 83.6 60 61.7
Sed0021911 Sechium edule HOM05D007860 ORTHO05D009950 1.4e-14 83.6 59 67.8
Solyc04g150108.1 Solanum lycopersicum HOM05D007860 ORTHO05D009950 1.4e-14 83.6 62 62.9
PGSC0003DMG400027747 Solanum tuberosum HOM05D007860 ORTHO05D009950 1.4e-14 83.6 62 62.9
Cc00_g31060 Coffea canephora HOM05D007860 ORTHO05D009950 2.4e-14 82.8 62 62.9
RcHm_v2.0_Chr4g0445811 Rosa chinensis HOM05D007860 ORTHO05D009950 2.4e-14 82.8 62 61.3
Sabra10G0157800 Salix brachista HOM05D007860 ORTHO05D009950 2.4e-14 82.8 51 72.5
TPR.G1333 Trifolium pratense HOM05D007860 ORTHO05D009950 3.2e-14 82.4 61 62.3
AT4G26055 Arabidopsis thaliana HOM05D007860 ORTHO05D009950 4.2e-14 82.0 57 61.4
Peaxi162Scf00760g00224 Petunia axillaris HOM05D007860 ORTHO05D009950 4.2e-14 82.0 61 63.9
Hund16092 Selenicereus undatus HOM05D007860 ORTHO05D009950 4.2e-14 82.0 58 69.0
CsaV3_5G026630 Cucumis sativus L. HOM05D007860 ORTHO05D009950 5.4e-14 81.6 58 69.0
Oeu017367.1 Olea europaea HOM05D007860 ORTHO05D009950 5.4e-14 81.6 60 61.7
SalBow8G2293 Salvia bowleyana HOM05D007860 ORTHO05D009950 7.1e-14 81.3 61 62.3
COL.COLO4_15031 Corchorus olitorius HOM05D007860 ORTHO05D009950 9.3e-14 80.9 52 71.2
MELO3C033702.2 Cucumis melo HOM05D007860 ORTHO05D009950 9.3e-14 80.9 59 64.4
Carub.0007s1490 Capsella rubella HOM05D007860 ORTHO05D009950 2.1e-13 79.7 54 64.8
Gohir.A07G000500 Gossypium hirsutum HOM05D007860 ORTHO05D009950 2.1e-13 79.7 64 62.5
Gohir.D04G062700 Gossypium hirsutum HOM05D007860 ORTHO05D009950 2.1e-13 79.7 58 63.8
Gorai.012G070100 Gossypium raimondii HOM05D007860 ORTHO05D009950 2.1e-13 79.7 58 63.8
Lalb_Chr11g0073451 Lupinus albus HOM05D007860 ORTHO05D009950 2.1e-13 79.7 53 66.0
THA.LOC104817766 Tarenaya hassleriana HOM05D007860 ORTHO05D009950 2.1e-13 79.7 52 65.4
Lj1g0016082 Lotus japonicus HOM05D007860 ORTHO05D009950 2.7e-13 79.3 61 60.7
CSS0034636 Camellia sinensis var. sinensis HOM05D007860 ORTHO05D009950 3.5e-13 79.0 43 86.0
Gohir.A05G349600 Gossypium hirsutum HOM05D007860 ORTHO05D009950 4.6e-13 78.6 64 60.9
Medtr7g026210 Medicago truncatula HOM05D007860 ORTHO05D009950 4.6e-13 78.6 61 60.7
Manes.09G185000 Manihot esculenta HOM05D007860 ORTHO05D009950 6.0e-13 78.2 60 60.0
Nn3g16785 Nelumbo nucifera HOM05D007860 ORTHO05D009950 1.0e-12 77.4 61 55.7
Potri.010G204200 Populus trichocarpa HOM05D007860 ORTHO05D009950 1.0e-12 77.4 51 68.6
AL7G26930 Arabidopsis lyrata HOM05D007860 ORTHO05D009950 1.3e-12 77.0 60 56.7
Zm00001eb205410 Zea mays HOM05D007860 ORTHO05D009950 1.3e-12 77.0 52 61.5
Lalb_Chr10g0091671 Lupinus albus HOM05D007860 ORTHO05D009950 2.3e-12 76.3 53 66.0
unitig_747.g21379 Utricularia gibba HOM05D007860 ORTHO05D009950 3.0e-12 75.9 87 43.7
CARHR233560 Cardamine hirsuta HOM05D007860 ORTHO05D009950 5.1e-12 75.1 57 59.6
Ciclev10033443m.g Citrus clementina HOM05D007860 ORTHO05D009950 5.1e-12 75.1 88 45.5
SpUn0576_0010 Schrenkiella parvula HOM05D007860 ORTHO05D009950 6.7e-12 74.7 48 64.6
HPP92_012590 Vanilla planifolia HOM05D007860 ORTHO05D009950 6.7e-12 74.7 43 76.7
SEGI_33557 Sequoiadendron giganteum HOM05D007860 ORTHO05D009950 1.5e-11 73.6 49 69.4
VMungo1383G1282 Vigna mungo HOM05D007860 ORTHO05D009950 3.3e-11 72.4 45 71.1
Thhalv10026736m.g Eutrema salsugineum HOM05D007860 ORTHO05D009950 5.6e-11 71.6 49 63.3
PSO170G0009 Papaver somniferum HOM05D007860 ORTHO05D009950 7.4e-11 71.2 45 66.7
Sp6g18800 Schrenkiella parvula HOM05D007860 ORTHO05D009950 7.4e-11 71.2 56 58.9
BcaC07g38219 Brassica carinata HOM05D007860 ORTHO05D009950 9.6e-11 70.9 61 50.8
A08p20930 Brassica napus HOM05D007860 ORTHO05D009950 9.6e-11 70.9 61 50.8
C08p09770 Brassica napus HOM05D002589 ORTHO05D002742 9.6e-11 70.9 61 50.8
BolC8t48648H Brassica oleracea HOM05D002589 ORTHO05D002742 9.6e-11 70.9 61 50.8
BraA08t34046Z Brassica rapa HOM05D007860 ORTHO05D009950 9.6e-11 70.9 61 50.8
Migut.E01407 Erythranthe guttata HOM05D007860 ORTHO05D009950 1.3e-10 70.5 61 50.8
Migut.E01421 Erythranthe guttata HOM05D007860 ORTHO05D009950 1.3e-10 70.5 61 50.8
Psat3g182840 Pisum sativum HOM05D007860 ORTHO05D009950 1.6e-10 70.1 43 72.1
Sc10g0001510 Simmondsia chinensis HOM05D007860 ORTHO05D009950 3.7e-10 68.9 43 72.1
AT5G57080 Arabidopsis thaliana HOM05D007860 ORTHO05D009950 6.2e-10 68.2 49 59.2
A03p56460 Brassica napus HOM05D002589 ORTHO05D002742 6.2e-10 68.2 57 52.6
C07p54670 Brassica napus HOM05D007860 ORTHO05D009950 6.2e-10 68.2 57 54.4
BolC7t45956H Brassica oleracea HOM05D007860 ORTHO05D009950 6.2e-10 68.2 57 54.4
BraA03t14716Z Brassica rapa HOM05D007860 ORTHO05D009950 6.2e-10 68.2 57 52.6
Actinidia13876 Actinidia chinensis HOM05D007860 ORTHO05D009950 1.1e-09 67.4 45 64.4
arahy.Tifrunner.gnm1.ann1.WKZY2Y Arachis hypogaea HOM05D007860 ORTHO05D009950 1.8e-09 66.6 36 75.0
BcaB01g04442 Brassica carinata HOM05D007860 ORTHO05D009950 2.4e-09 66.2 57 50.9
BraA03t10609Z Brassica rapa HOM05D007860 ORTHO05D009950 2.4e-09 66.2 57 52.6
ClCG09G019790 Citrullus lanatus HOM05D007860 ORTHO05D009950 6.9e-09 64.7 44 70.5
MD16G1008700 Malus domestica HOM05D007860 ORTHO05D009950 6.9e-09 64.7 43 65.1
EL10Ac2g04657 Beta vulgaris HOM05D007860 ORTHO05D009950 4.5e-08 62.0 47 61.7
FAN22G0325 Fragaria x ananassa HOM05D007860 ORTHO05D009950 4.5e-08 62.0 61 50.8
BcaNung07291 Brassica carinata HOM05D007860 ORTHO05D009950 9.9e-08 60.8 57 50.9


User provided reference genes

Program Settings