Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro03840 Vaccinium macrocarpon HOM05D005528 ORTHO05D007066 1.3e-114 416.4 201 100.0
vmacro03653 Vaccinium macrocarpon HOM05D005528 ORTHO05D007066 1.2e-72 276.9 177 76.8
Actinidia26871 Actinidia chinensis HOM05D005528 ORTHO05D007066 1.8e-68 263.1 177 72.9
CSS0037266 Camellia sinensis var. sinensis HOM05D005528 ORTHO05D007066 4.0e-68 261.9 177 70.6
CANSAT56G1404 Cannabis sativa HOM05D005528 ORTHO05D007066 2.0e-67 259.6 176 69.9
Dinv13958 Davidia involucrata HOM05D005528 ORTHO05D007066 2.0e-67 259.6 198 65.2
GSVIVG01007237001 Vitis vinifera HOM05D005528 ORTHO05D007066 2.0e-67 259.6 176 71.0
TAR624G1052 Trochodendron aralioides HOM05D005528 ORTHO05D007066 1.7e-66 256.5 176 68.8
FAN25G0965 Fragaria x ananassa HOM05D005528 ORTHO05D007066 2.8e-66 255.8 176 68.2
MD05G1356600 Malus domestica HOM05D005528 ORTHO05D007066 2.8e-66 255.8 176 68.2
Lj1A1238T62 Lonicera japonica HOM05D005528 ORTHO05D007066 3.7e-66 255.4 176 69.3
Cpa.g.sc152.65 Carica papaya HOM05D005528 ORTHO05D007066 6.3e-66 254.6 176 68.8
Manes.16G001400 Manihot esculenta HOM05D005528 ORTHO05D007066 1.1e-65 253.8 176 67.6
Oeu003172.1 Olea europaea HOM05D005528 ORTHO05D007066 1.1e-65 253.8 176 67.6
FvH4_3g01110 Fragaria vesca HOM05D005528 ORTHO05D007066 1.4e-65 253.4 176 67.6
Potri.011G023000 Populus trichocarpa HOM05D005528 ORTHO05D007066 1.4e-65 253.4 176 67.6
QL03p008514 Quercus lobata HOM05D005528 ORTHO05D007066 1.4e-65 253.4 177 69.5
SGA_v2.0_scaffold7G03770 Striga asiatica HOM05D005528 ORTHO05D007066 1.4e-65 253.4 176 68.8
MSTRG.7174 Avicennia marina HOM05D005528 ORTHO05D007066 2.4e-65 252.7 176 67.6
Lalb_Chr15g0087911 Lupinus albus HOM05D005528 ORTHO05D007066 5.4e-65 251.5 177 67.2
Sc17g0007680 Simmondsia chinensis HOM05D005528 ORTHO05D007066 5.4e-65 251.5 177 66.7
PGR004G2776 Punica granatum HOM05D005528 ORTHO05D007066 9.1e-65 250.8 176 67.0
Oeu049726.1 Olea europaea HOM05D005528 ORTHO05D007066 1.2e-64 250.4 176 67.6
Cc09_g00990 Coffea canephora HOM05D005528 ORTHO05D007066 1.6e-64 250.0 176 67.6
Medtr4g132890 Medicago truncatula HOM05D005528 ORTHO05D007066 1.6e-64 250.0 176 67.0
QL10p003542 Quercus lobata HOM05D005528 ORTHO05D007066 1.6e-64 250.0 174 69.0
PSO541G4654 Papaver somniferum HOM05D005528 ORTHO05D007066 2.0e-64 249.6 177 67.2
RcHm_v2.0_Chr5g0001681 Rosa chinensis HOM05D005528 ORTHO05D007066 2.0e-64 249.6 176 67.0
Cfa000120 Carpinus fangiana HOM05D005528 ORTHO05D007066 2.7e-64 249.2 176 67.0
Nitab4.5_0001198g0200 Nicotiana tabacum HOM05D005528 ORTHO05D007066 2.7e-64 249.2 177 66.7
CiPaw.10G076700 Carya illinoinensis HOM05D005528 ORTHO05D007066 3.5e-64 248.8 176 66.5
FAN21G0894 Fragaria x ananassa HOM05D005528 ORTHO05D007066 3.5e-64 248.8 176 66.5
Nitab4.5_0000143g0380 Nicotiana tabacum HOM05D005528 ORTHO05D007066 3.5e-64 248.8 176 67.0
TWI38G1545 Tripterygium wilfordii HOM05D005528 ORTHO05D007066 4.5e-64 248.4 176 67.0
PSO675G5657 Papaver somniferum HOM05D005528 ORTHO05D007066 7.7e-64 247.7 177 66.1
QL10p003559 Quercus lobata HOM05D005528 ORTHO05D007066 1.0e-63 247.3 198 61.1
Sabra11G0014000 Salix brachista HOM05D005528 ORTHO05D007066 1.0e-63 247.3 177 66.1
CAN.G1186.18 Capsicum annuum HOM05D005528 ORTHO05D007066 2.3e-63 246.1 176 64.8
Sopen11g006860 Solanum pennellii HOM05D005528 ORTHO05D007066 2.3e-63 246.1 176 65.9
Psat4g003480 Pisum sativum HOM05D005528 ORTHO05D007066 2.9e-63 245.7 176 66.5
Thecc.06G231500 Theobroma cacao HOM05D005528 ORTHO05D007066 2.9e-63 245.7 176 66.5
arahy.Tifrunner.gnm1.ann1.GWT3TM Arachis hypogaea HOM05D005528 ORTHO05D007066 5.0e-63 245.0 176 64.8
Aqoxy1G04149 Aquilegia oxysepala HOM05D005528 ORTHO05D007066 6.6e-63 244.6 176 65.9
COL.COLO4_31864 Corchorus olitorius HOM05D005528 ORTHO05D007066 6.6e-63 244.6 176 65.9
PGSC0003DMG400013339 Solanum tuberosum HOM05D005528 ORTHO05D007066 6.6e-63 244.6 176 65.3
Lj4g0026553 Lotus japonicus HOM05D005528 ORTHO05D007066 8.6e-63 244.2 176 66.5
Solyc11g012070.3 Solanum lycopersicum HOM05D005528 ORTHO05D007066 8.6e-63 244.2 176 64.8
Prupe.4G012400 Prunus persica HOM05D005528 ORTHO05D007066 1.5e-62 243.4 176 67.6
SalBow8G0359 Salvia bowleyana HOM05D005528 ORTHO05D007066 1.5e-62 243.4 177 65.5
arahy.Tifrunner.gnm1.ann1.T9A2AP Arachis hypogaea HOM05D005528 ORTHO05D007066 1.9e-62 243.0 176 63.6
Migut.M01382 Erythranthe guttata HOM05D005528 ORTHO05D007066 2.5e-62 242.7 176 67.0
TPR.G36996 Trifolium pratense HOM05D005528 ORTHO05D007066 2.5e-62 242.7 176 65.3
AUR62021877 Chenopodium quinoa HOM05D005528 ORTHO05D007066 3.3e-62 242.3 176 66.5
Nn1g07332 Nelumbo nucifera HOM05D005528 ORTHO05D007066 3.3e-62 242.3 176 65.9
Ca_21050_v3 Cicer arietinum L. HOM05D005528 ORTHO05D007066 4.2e-62 241.9 177 65.0
Duzib235G0675 Durio zibethinus HOM05D005528 ORTHO05D007066 4.2e-62 241.9 176 65.3
Gohir.A05G173400 Gossypium hirsutum HOM05D005528 ORTHO05D007066 4.2e-62 241.9 176 64.8
DCAR_030878 Daucus carota HOM05D005528 ORTHO05D007066 7.2e-62 241.1 176 65.3
ClCG01G021550 Citrullus lanatus HOM05D005528 ORTHO05D007066 9.5e-62 240.7 176 66.5
Ah.09g234310 Amaranthus hybridus HOM05D005528 ORTHO05D007066 1.2e-61 240.4 176 67.0
Lsat_1_v5_gn_0_40241 Lactuca sativa HOM05D005528 ORTHO05D007066 1.2e-61 240.4 176 62.5
VMungo1215G2369 Vigna mungo HOM05D005528 ORTHO05D007066 1.2e-61 240.4 176 64.8
EL10Ac8g20170 Beta vulgaris HOM05D005528 ORTHO05D007066 1.6e-61 240.0 175 66.3
Eucgr.D01386 Eucalyptus grandis HOM05D005528 ORTHO05D007066 1.6e-61 240.0 176 64.2
Gohir.D05G176400 Gossypium hirsutum HOM05D005528 ORTHO05D007066 2.1e-61 239.6 176 64.8
Gorai.009G181800 Gossypium raimondii HOM05D005528 ORTHO05D007066 2.1e-61 239.6 176 64.8
Glyma.17G009100 Glycine max HOM05D005528 ORTHO05D007066 2.8e-61 239.2 176 64.8
Hund21156 Selenicereus undatus HOM05D005528 ORTHO05D007066 2.8e-61 239.2 176 65.9
CANSAT56G4535 Cannabis sativa HOM05D005528 ORTHO05D007066 3.6e-61 238.8 177 62.1
AUR62012779 Chenopodium quinoa HOM05D005528 ORTHO05D007066 3.6e-61 238.8 176 65.9
CsaV3_6G048570 Cucumis sativus L. HOM05D005528 ORTHO05D007066 3.6e-61 238.8 176 65.9
HanXRQChr01g0006671 Helianthus annuus HOM05D005528 ORTHO05D007066 4.7e-61 238.4 176 64.2
ATR1128G032 Amborella trichopoda HOM05D005528 ORTHO05D007066 6.1e-61 238.0 176 63.1
Ciclev10016375m.g Citrus clementina HOM05D005528 ORTHO05D007066 6.1e-61 238.0 176 63.6
Sed0027431 Sechium edule HOM05D005528 ORTHO05D007066 6.1e-61 238.0 177 63.8
HanXRQChr01g0006681 Helianthus annuus HOM05D005528 ORTHO05D007066 1.0e-60 237.3 177 62.1
Zm00001eb066860 Zea mays HOM05D005528 ORTHO05D007066 4.0e-60 235.3 177 63.3
Aa31LG6G4400 Aethionema arabicum HOM05D005528 ORTHO05D007066 3.4e-59 232.3 177 62.7
Os04g0669500 Oryza sativa ssp. japonica HOM05D005528 ORTHO05D007066 4.4e-59 231.9 177 62.1
AT4G22300 Arabidopsis thaliana HOM05D005528 ORTHO05D007066 5.7e-59 231.5 176 62.5
unitig_37.g12163 Utricularia gibba HOM05D005528 ORTHO05D007066 5.7e-59 231.5 174 62.6
CARHR229200 Cardamine hirsuta HOM05D005528 ORTHO05D007066 7.5e-59 231.1 176 63.1
HPP92_004758 Vanilla planifolia HOM05D005528 ORTHO05D007066 1.3e-58 230.3 176 61.4
THA.LOC104812987 Tarenaya hassleriana HOM05D005528 ORTHO05D007066 1.7e-58 229.9 176 61.9
ECA248G2494 Erigeron canadensis HOM05D005528 ORTHO05D007066 8.3e-58 227.6 176 59.7
Carub.0007s1901 Capsella rubella HOM05D005528 ORTHO05D007066 1.1e-57 227.3 176 61.4
Sp7g20420 Schrenkiella parvula HOM05D005528 ORTHO05D007066 3.1e-57 225.7 176 61.4
BolC7t45679H Brassica oleracea HOM05D005528 ORTHO05D007066 1.6e-56 223.4 180 61.1
CARHR229210 Cardamine hirsuta HOM05D005528 ORTHO05D007066 1.6e-56 223.4 177 61.6
Thhalv10025978m.g Eutrema salsugineum HOM05D005528 ORTHO05D007066 1.6e-56 223.4 176 61.4
AL7G31320 Arabidopsis lyrata HOM05D005528 ORTHO05D007066 2.0e-56 223.0 176 60.8
AT4G22305 Arabidopsis thaliana HOM05D005528 ORTHO05D007066 2.7e-56 222.6 177 62.1
BraA03t14410Z Brassica rapa HOM05D005528 ORTHO05D007066 4.5e-56 221.9 176 60.2
SEGI_30686 Sequoiadendron giganteum HOM05D005528 ORTHO05D007066 5.9e-56 221.5 177 57.1
C07p51770 Brassica napus HOM05D005528 ORTHO05D007066 7.8e-56 221.1 176 60.8
BcaNung02505 Brassica carinata HOM05D005528 ORTHO05D007066 1.0e-55 220.7 176 60.8
BcaNung02504 Brassica carinata HOM05D005528 ORTHO05D007066 1.7e-55 219.9 177 61.6
A03p53440 Brassica napus HOM05D005528 ORTHO05D007066 2.3e-55 219.5 176 59.7
CDE07G1265 Ceratophyllum demersum HOM05D005528 ORTHO05D007066 2.9e-55 219.2 176 59.7
BcaNung01697 Brassica carinata HOM05D005528 ORTHO05D007066 8.6e-55 217.6 177 59.3
AL7G31310 Arabidopsis lyrata HOM05D005528 ORTHO05D007066 1.5e-54 216.9 177 59.3
Carub.0007s1900 Capsella rubella HOM05D005528 ORTHO05D007066 1.5e-54 216.9 177 60.5
Atru.chr1.2485 Acer truncatum HOM05D000003 ORTHO05D000004 6.1e-53 211.5 148 68.2
Rhsim13G0147900 Rhododendron simsii HOM05D005528 ORTHO05D007066 6.8e-52 208.0 185 60.0
Mapoly0191s0010 Marchantia polymorpha HOM05D005528 ORTHO05D007066 4.4e-51 205.3 173 58.4
Lj5g0008711 Lotus japonicus HOM05D005528 ORTHO05D007066 8.6e-47 191.0 154 63.0
CDE04G2569 Ceratophyllum demersum HOM05D005528 ORTHO05D007066 1.5e-46 190.3 176 55.1
Zm00001eb066850 Zea mays HOM05D005528 ORTHO05D007066 4.3e-46 188.7 183 50.8
Os04g0669600 Oryza sativa ssp. japonica HOM05D005528 ORTHO05D007066 1.6e-45 186.8 183 50.3
GSVIVG01002096001 Vitis vinifera HOM05D005528 ORTHO05D007066 3.6e-45 185.7 155 58.7
Pp3c15_7880 Physcomitrium patens HOM05D005528 ORTHO05D007066 3.7e-42 175.6 186 48.9
Peaxi162Scf00558g00217 Petunia axillaris HOM05D005528 ORTHO05D007066 7.0e-41 171.4 176 51.1
AL8G44690 Arabidopsis lyrata HOM05D005528 ORTHO05D007066 8.9e-36 154.5 121 59.5
Lalb_Chr15g0087931 Lupinus albus HOM05D005528 ORTHO05D007066 7.5e-35 151.4 118 61.9
Thhalv10023148m.g Eutrema salsugineum HOM05D005528 ORTHO05D007066 2.9e-34 149.4 139 51.8
Phvul.003G083000 Phaseolus vulgaris HOM05D005528 ORTHO05D007066 9.2e-33 144.4 112 61.6
Zm00001eb433300 Zea mays HOM05D005528 ORTHO05D007066 7.8e-32 141.4 152 48.0
Potri.004G001701 Populus trichocarpa HOM05D005528 ORTHO05D007066 9.9e-27 124.4 83 71.1
HanXRQChr01g0006701 Helianthus annuus HOM05D005528 ORTHO05D007066 3.9e-23 112.5 80 65.0
AL7G31780 Arabidopsis lyrata HOM05D005528 ORTHO05D000003 6.9e-20 101.7 70 62.9
Lalb_Chr15g0087921 Lupinus albus HOM05D005528 ORTHO05D007066 6.9e-20 101.7 64 68.8
PRCOL_00003009 Prasinoderma coloniale HOM05D005528 ORTHO05D007066 2.6e-19 99.8 180 31.7
Actinidia02324 Actinidia chinensis HOM05D005528 ORTHO05D007066 9.9e-19 97.8 64 67.2
QL10p003478 Quercus lobata HOM05D005528 ORTHO05D007066 9.9e-19 97.8 65 66.2
ATR0390G001 Amborella trichopoda HOM05D005528 ORTHO05D007066 7.1e-17 91.7 58 69.0
MD10G1329700 Malus domestica HOM05D005528 ORTHO05D007066 2.1e-16 90.1 151 35.8
Thhalv10011887m.g Eutrema salsugineum HOM05D005528 ORTHO05D007066 6.0e-16 88.6 60 65.0
Cfa027170 Carpinus fangiana HOM05D005528 ORTHO05D007066 1.5e-14 84.0 178 28.1
Haze_06901 Corylus avellana HOM05D005528 ORTHO05D007066 1.9e-14 83.6 119 42.9
Glyma.07G264900 Glycine max HOM05D005528 ORTHO05D007066 5.6e-14 82.0 71 56.3
Cre03.g164350 Chlamydomonas reinhardtii HOM05D001262 ORTHO05D001114 9.6e-14 81.3 156 30.1
MCO05G361 Micromonas commoda HOM05D001262 ORTHO05D001114 4.0e-12 75.9 178 27.0
PRCOL_00004932 Prasinoderma coloniale HOM05D005528 ORTHO05D001114 5.3e-12 75.5 177 28.2
MCO05G339 Micromonas commoda HOM05D005528 ORTHO05D007066 7.6e-11 71.6 167 28.7
MELO3C007429.2 Cucumis melo HOM05D005528 ORTHO05D007066 1.3e-10 70.9 64 53.1
Ah.09g225650 Amaranthus hybridus HOM05D001262 ORTHO05D001114 3.2e-09 66.2 182 24.7
PGR142G2359 Punica granatum HOM05D001262 ORTHO05D001114 3.5e-08 62.8 186 26.3
MCO13G631 Micromonas commoda HOM05D005528 ORTHO05D007066 7.9e-08 61.6 178 25.8
HPP92_009842 Vanilla planifolia HOM05D001262 ORTHO05D001114 1.0e-07 61.2 184 26.6
Dinv41541 Davidia involucrata HOM05D001262 ORTHO05D001114 1.3e-07 60.8 184 25.5
HanXRQChr06g0180221 Helianthus annuus HOM05D001262 ORTHO05D001114 1.3e-07 60.8 200 27.0
Manes.11G052300 Manihot esculenta HOM05D001262 ORTHO05D001114 1.3e-07 60.8 191 26.7
Hund09152 Selenicereus undatus HOM05D001262 ORTHO05D001114 1.8e-07 60.5 185 26.5
MBI04_g10414_MAGBIO Magnolia biondii HOM05D001262 ORTHO05D001114 3.9e-07 59.3 187 28.3
CiPaw.03G240400 Carya illinoinensis HOM05D001262 ORTHO05D001114 8.7e-07 58.2 186 26.3
Hma1.2p1_0018F.1_g012760 Hydrangea macrophylla HOM05D001262 ORTHO05D001114 1.1e-06 57.8 186 24.2
CDE01G0286 Ceratophyllum demersum HOM05D001262 ORTHO05D001114 1.5e-06 57.4 186 25.8
HanXRQChr16g0501371 Helianthus annuus HOM05D001262 ORTHO05D001114 1.5e-06 57.4 183 27.3
Sed0005651 Sechium edule HOM05D001262 ORTHO05D001114 1.5e-06 57.4 186 25.8
Zm00001eb336850 Zea mays HOM05D001262 ORTHO05D001114 1.5e-06 57.4 186 28.0
Cfa025413 Carpinus fangiana HOM05D001262 ORTHO05D017802 2.5e-06 56.6 104 27.9
CiPaw.04G169800 Carya illinoinensis HOM05D001262 ORTHO05D001114 2.5e-06 56.6 186 26.3
CDE03G0268 Ceratophyllum demersum HOM05D001262 ORTHO05D001114 3.3e-06 56.2 186 25.3
TAR625G1143 Trochodendron aralioides HOM05D001262 ORTHO05D001114 4.3e-06 55.8 186 26.3
Zm00001eb122690 Zea mays HOM05D001262 ORTHO05D001114 4.3e-06 55.8 186 29.0
Aqoxy7G03751 Aquilegia oxysepala HOM05D001262 ORTHO05D001114 7.4e-06 55.1 186 24.7
MBI01_g11881_MAGBIO Magnolia biondii HOM05D001262 ORTHO05D001114 7.4e-06 55.1 186 26.9
AUR62030663 Chenopodium quinoa HOM05D001262 ORTHO05D001114 9.6e-06 54.7 187 23.0


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