Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro03566 Vaccinium macrocarpon HOM05D005725 ORTHO05D007531 0.0e+00 1401.3 695 100.0
Dinv17876 Davidia involucrata HOM05D005725 ORTHO05D007531 2.0e-159 567.0 668 50.0
Nn7g38404 Nelumbo nucifera HOM05D005725 ORTHO05D007531 1.1e-120 438.3 665 41.1
RcHm_v2.0_Chr5g0021701 Rosa chinensis HOM05D005725 ORTHO05D007531 1.1e-117 428.3 662 39.3
GSVIVG01010083001 Vitis vinifera HOM05D005725 ORTHO05D007531 7.2e-117 425.6 664 40.5
Potri.001G075300 Populus trichocarpa HOM05D005725 ORTHO05D007531 1.2e-116 424.9 658 40.4
Manes.03G071900 Manihot esculenta HOM05D005725 ORTHO05D007531 2.3e-115 420.6 664 40.4
FvH4_3g13240 Fragaria vesca HOM05D005725 ORTHO05D007531 3.0e-115 420.2 659 38.8
Prupe.4G119800 Prunus persica HOM05D005725 ORTHO05D007531 1.1e-114 418.3 673 38.6
FAN21G2681 Fragaria x ananassa HOM05D005725 ORTHO05D007531 2.0e-114 417.5 653 38.9
FAN11G2553 Fragaria x ananassa HOM05D005725 ORTHO05D007531 4.3e-114 416.4 678 37.8
CiPaw.10G107600 Carya illinoinensis HOM05D005725 ORTHO05D007531 1.1e-112 411.8 663 40.6
Cfa001153 Carpinus fangiana HOM05D005725 ORTHO05D007531 1.8e-112 411.0 509 46.8
CANSAT54G1139 Cannabis sativa HOM05D005725 ORTHO05D007531 3.8e-110 403.3 662 39.9
Sabra01G0053700 Salix brachista HOM05D005725 ORTHO05D007531 5.5e-109 399.4 737 38.8
MD05G1243800 Malus domestica HOM05D005725 ORTHO05D007531 7.9e-108 395.6 664 37.7
FAN16G0048 Fragaria x ananassa HOM05D005725 ORTHO05D007531 3.3e-106 390.2 653 37.2
Solyc01g021640.3 Solanum lycopersicum HOM05D005725 ORTHO05D007531 4.4e-106 389.8 661 38.6
Sopen01g016500 Solanum pennellii HOM05D005725 ORTHO05D007531 4.4e-106 389.8 661 38.7
MELO3C007000.2 Cucumis melo HOM05D005725 ORTHO05D007531 9.7e-106 388.7 667 36.6
Thecc.02G002000 Theobroma cacao HOM05D005725 ORTHO05D007531 1.4e-104 384.8 669 38.1
TWI38G1126 Tripterygium wilfordii HOM05D005725 ORTHO05D007531 1.8e-104 384.4 658 38.1
Lalb_Chr18g0051971 Lupinus albus HOM05D005725 ORTHO05D007531 4.5e-103 379.8 668 37.0
CsaV3_6G053120 Cucumis sativus L. HOM05D005725 ORTHO05D007531 1.7e-102 377.9 505 43.0
FAN25G0714 Fragaria x ananassa HOM05D005725 ORTHO05D007531 8.0e-100 369.0 644 36.3
Eucgr.D00006 Eucalyptus grandis HOM05D005725 ORTHO05D007531 1.5e-98 364.8 656 37.7
Medtr2g437810 Medicago truncatula HOM05D005725 ORTHO05D007531 1.5e-98 364.8 658 37.2
ClCG01G025890 Citrullus lanatus HOM05D005725 ORTHO05D007531 2.0e-98 364.4 509 41.5
DCAR_001262 Daucus carota HOM05D005725 ORTHO05D007531 2.6e-98 364.0 669 36.9
TPR.G30931 Trifolium pratense HOM05D005725 ORTHO05D007531 9.7e-98 362.1 654 37.5
HanXRQChr09g0257851 Helianthus annuus HOM05D005725 ORTHO05D007531 3.7e-97 360.1 681 35.4
Peaxi162Scf00378g00520 Petunia axillaris HOM05D005725 ORTHO05D007531 4.8e-97 359.8 660 35.5
PSO541G5061 Papaver somniferum HOM05D005725 ORTHO05D007531 5.3e-96 356.3 646 36.7
Atru.chr10.248 Acer truncatum HOM05D005725 ORTHO05D007531 7.0e-96 355.9 433 46.2
Duzib132G0485 Durio zibethinus HOM05D005725 ORTHO05D007531 1.2e-95 355.1 692 37.4
ECA232G4493 Erigeron canadensis HOM05D005725 ORTHO05D007531 3.5e-95 353.6 672 36.8
Phvul.009G244300 Phaseolus vulgaris HOM05D005725 ORTHO05D007531 5.9e-95 352.8 671 36.2
MSTRG.16376 Avicennia marina HOM05D005725 ORTHO05D007531 1.3e-94 351.7 660 35.8
COL.COLO4_25036 Corchorus olitorius HOM05D005725 ORTHO05D007531 1.3e-94 351.7 659 36.7
Lj6g0004794 Lotus japonicus HOM05D005725 ORTHO05D007531 1.7e-94 351.3 656 37.7
arahy.Tifrunner.gnm1.ann1.2M6VYA Arachis hypogaea HOM05D005725 ORTHO05D007531 1.1e-93 348.6 657 35.9
Nitab4.5_0001484g0010 Nicotiana tabacum HOM05D005725 ORTHO05D007531 4.2e-93 346.7 417 45.6
Psat1g151080 Pisum sativum HOM05D005725 ORTHO05D007531 1.6e-92 344.7 678 35.0
Aqoxy1G01377 Aquilegia oxysepala HOM05D005725 ORTHO05D007531 2.7e-92 344.0 691 34.0
TAR626G0027 Trochodendron aralioides HOM05D005725 ORTHO05D007531 1.4e-91 341.7 375 49.6
Glyma.15G155900 Glycine max HOM05D005725 ORTHO05D007531 5.2e-91 339.7 661 36.0
VMungo1309G0521 Vigna mungo HOM05D005725 ORTHO05D007531 6.3e-89 332.8 670 34.6
Nitab4.5_0000253g0020 Nicotiana tabacum HOM05D005725 ORTHO05D007531 1.1e-88 332.0 419 44.2
Cc09_g04730 Coffea canephora HOM05D005725 ORTHO05D007531 5.9e-87 326.2 682 33.3
Hund26771 Selenicereus undatus HOM05D005725 ORTHO05D007531 5.9e-87 326.2 546 37.9
Glyma.09G048600 Glycine max HOM05D005725 ORTHO05D007531 7.7e-87 325.9 661 34.6
Gorai.007G055200 Gossypium raimondii HOM05D005725 ORTHO05D007531 1.4e-83 315.1 695 34.8
Ca_02400_v3 Cicer arietinum L. HOM05D005725 ORTHO05D007531 5.2e-83 313.2 699 33.9
Gohir.D11G050800 Gossypium hirsutum HOM05D005725 ORTHO05D007531 2.0e-82 311.2 695 34.5
Gohir.A11G047200 Gossypium hirsutum HOM05D005725 ORTHO05D007531 2.6e-82 310.8 663 35.1
CSS0030006 Camellia sinensis var. sinensis HOM05D005725 ORTHO05D007531 7.5e-82 309.3 665 36.4
QL11p011022 Quercus lobata HOM05D005725 ORTHO05D007531 1.3e-81 308.5 982 27.6
Ah.03g147910 Amaranthus hybridus HOM05D005725 ORTHO05D007531 1.0e-78 298.9 666 32.0
Migut.M02028 Erythranthe guttata HOM05D005725 ORTHO05D007531 1.0e-78 298.9 651 32.1
arahy.Tifrunner.gnm1.ann1.GBFD5K Arachis hypogaea HOM05D005725 ORTHO05D007531 1.7e-78 298.1 622 34.2
AL6G28440 Arabidopsis lyrata HOM05D005725 ORTHO05D007531 3.3e-77 293.9 655 32.8
AUR62003571 Chenopodium quinoa HOM05D005725 ORTHO05D007531 6.1e-76 289.7 673 31.2
Carub.0006s1558 Capsella rubella HOM05D005725 ORTHO05D007531 4.0e-75 287.0 653 33.1
PGR004G2791 Punica granatum HOM05D005725 ORTHO05D007531 5.2e-75 286.6 655 33.1
AT5G17370 Arabidopsis thaliana HOM05D005725 ORTHO05D007531 3.4e-74 283.9 656 32.8
arahy.Tifrunner.gnm1.ann1.G9C5AI Arachis hypogaea HOM05D005725 ORTHO05D007531 2.4e-72 277.7 622 33.6
Thhalv10015915m.g Eutrema salsugineum HOM05D005725 ORTHO05D007531 4.1e-72 276.9 661 33.0
Sed0022851 Sechium edule HOM05D005725 ORTHO05D007531 3.5e-71 273.9 536 35.1
HPP92_000831 Vanilla planifolia HOM05D005725 ORTHO05D007531 7.8e-71 272.7 664 29.1
Lsat_1_v5_gn_8_107401 Lactuca sativa HOM05D005725 ORTHO05D007531 3.0e-70 270.8 554 33.8
C02p09010 Brassica napus HOM05D005725 ORTHO05D007531 5.0e-70 270.0 676 32.7
BcaC03g18554 Brassica carinata HOM05D005725 ORTHO05D007531 8.6e-70 269.2 533 36.0
BraA02t05379Z Brassica rapa HOM05D005725 ORTHO05D007531 8.6e-70 269.2 536 36.6
A02p04160 Brassica napus HOM05D005725 ORTHO05D007531 1.9e-69 268.1 548 35.9
SalBow8G4963 Salvia bowleyana HOM05D005725 ORTHO05D007531 2.5e-69 267.7 430 37.2
BolC2t06810H Brassica oleracea HOM05D005725 ORTHO05D007531 4.3e-69 266.9 679 32.5
BcaB05g23263 Brassica carinata HOM05D005725 ORTHO05D007531 5.6e-69 266.5 533 36.4
Sp6g26850 Schrenkiella parvula HOM05D005725 ORTHO05D007531 5.6e-69 266.5 679 32.0
ATR0794G001 Amborella trichopoda HOM05D005725 ORTHO05D007531 1.0e-67 262.3 525 35.0
CARHR195840 Cardamine hirsuta HOM05D005725 ORTHO05D007531 4.4e-66 256.9 660 31.8
AUR62017886 Chenopodium quinoa HOM05D005725 ORTHO05D007531 2.2e-65 254.6 665 29.5
Aa31LG11G12260 Aethionema arabicum HOM05D005725 ORTHO05D007531 6.4e-65 253.1 493 34.9
SHI12770 Sapria himalayana HOM05D005725 ORTHO05D000023 6.4e-65 253.1 377 41.6
Zm00001eb298410 Zea mays HOM05D005725 ORTHO05D007531 1.2e-63 248.8 667 28.0
Ciclev10015389m.g Citrus clementina HOM05D005725 ORTHO05D007531 2.0e-63 248.1 561 33.2
Os07g0108000 Oryza sativa ssp. japonica HOM05D005725 ORTHO05D007531 1.5e-61 241.9 666 27.8
RcHm_v2.0_Chr5g0021601 Rosa chinensis HOM05D005725 ORTHO05D007531 4.4e-50 203.8 405 31.4
Sc05g0005240 Simmondsia chinensis HOM05D005725 ORTHO05D007531 1.3e-49 202.2 344 37.8
Haze_05198 Corylus avellana HOM05D005725 ORTHO05D007531 1.2e-47 195.7 247 48.2
DCAR_004356 Daucus carota HOM05D005725 ORTHO05D007531 1.1e-45 189.1 429 32.6
Duzib052G0524 Durio zibethinus HOM05D005725 ORTHO05D007531 1.6e-44 185.3 302 39.4
unitig_746.g26584 Utricularia gibba HOM05D005809 ORTHO05D007259 8.9e-43 179.5 316 37.7
Pp3c6_29180 Physcomitrium patens HOM05D005725 ORTHO05D007531 2.7e-39 167.9 441 29.0
Atru.chr2.2825 Acer truncatum HOM05D005725 ORTHO05D007531 3.0e-38 164.5 484 30.8
Potri.003G155900 Populus trichocarpa HOM05D005725 ORTHO05D007531 1.6e-36 158.7 158 57.0
DCAR_004355 Daucus carota HOM05D005725 ORTHO05D007531 7.6e-34 149.8 298 33.9
Haze_05199 Corylus avellana HOM05D005725 ORTHO05D007531 6.4e-33 146.7 385 30.1
RcHm_v2.0_Chr5g0021611 Rosa chinensis HOM05D005725 ORTHO05D007531 8.4e-33 146.4 199 43.7
ECA232G1808 Erigeron canadensis HOM05D005725 ORTHO05D007531 3.9e-30 137.5 363 31.7
Oeu005615.1 Olea europaea HOM05D000039 ORTHO05D005263 5.6e-29 133.7 94 61.7
CDE06G0984 Ceratophyllum demersum HOM05D005725 ORTHO05D007531 1.6e-28 132.1 406 27.8
Oeu013488.1 Olea europaea HOM05D005725 ORTHO05D007531 2.8e-28 131.3 171 39.8
Ciclev10017729m.g Citrus clementina HOM05D005725 ORTHO05D007531 1.2e-26 125.9 82 67.1
Mapoly0033s0026 Marchantia polymorpha HOM05D005725 ORTHO05D007531 1.5e-26 125.6 343 27.1
EL10Ac6g15292 Beta vulgaris HOM05D005725 ORTHO05D007531 5.8e-26 123.6 158 43.0
SMO230G0054 Selaginella moellendorffii HOM05D005725 ORTHO05D007531 2.4e-19 101.7 313 26.5
TAR626G0843 Trochodendron aralioides HOM05D005725 ORTHO05D007531 8.4e-17 93.2 261 30.3
A03p08350 Brassica napus HOM05D005725 ORTHO05D007531 7.1e-16 90.1 316 28.5
CBR_g22873 Chara braunii HOM05D005725 ORTHO05D007531 2.1e-15 88.6 677 21.9
AagrBONN_evm.TU.Sc2ySwM_368.2823 Anthoceros agrestis HOM05D005725 ORTHO05D007531 3.9e-14 84.3 265 26.8
SEGI_40606 Sequoiadendron giganteum HOM05D005725 ORTHO05D007531 6.7e-14 83.6 128 41.4
SGA_v2.0_scaffold423G51459 Striga asiatica HOM05D005725 ORTHO05D007531 1.3e-12 79.3 180 31.7
SEGI_16346 Sequoiadendron giganteum HOM05D005725 ORTHO05D007531 2.6e-10 71.6 150 29.3
Atru.chr3.3228 Acer truncatum HOM05D000154 ORTHO05D000092 5.0e-09 67.4 61 50.8
Glyma.06G212700 Glycine max HOM05D005725 ORTHO05D007531 1.0e-06 59.7 32 81.2


User provided reference genes

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