Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro02617 Vaccinium macrocarpon HOM05D007181 ORTHO05D008722 1.2e-143 513.1 250 100.0
Rhsim13G0029700 Rhododendron simsii HOM05D007181 ORTHO05D008722 9.6e-80 300.8 197 78.2
CSS0018066 Camellia sinensis var. sinensis HOM05D007181 ORTHO05D008722 3.7e-63 245.7 203 62.6
Actinidia19968 Actinidia chinensis HOM05D007181 ORTHO05D008722 3.4e-61 239.2 211 58.8
CSS0010421 Camellia sinensis var. sinensis HOM05D007181 ORTHO05D008722 7.6e-61 238.0 222 56.8
Hma1.2p1_0760F.1_g214120 Hydrangea macrophylla HOM05D007181 ORTHO05D008722 4.5e-53 212.2 205 54.1
Hma1.2p1_1332F.1_g276040 Hydrangea macrophylla HOM05D007181 ORTHO05D008722 1.5e-48 197.2 205 51.2
Dinv32881 Davidia involucrata HOM05D007181 ORTHO05D008722 6.3e-47 191.8 203 50.2
Solyc12g100320.2 Solanum lycopersicum HOM05D007181 ORTHO05D008722 1.1e-43 181.0 197 48.7
Sopen12g034950 Solanum pennellii HOM05D007181 ORTHO05D008722 1.9e-43 180.3 203 47.8
PGSC0003DMG400004278 Solanum tuberosum HOM05D007181 ORTHO05D008722 8.8e-41 171.4 197 47.7
AUR62032277 Chenopodium quinoa HOM05D007181 ORTHO05D008722 1.1e-38 164.5 203 45.8
Nitab4.5_0003555g0080 Nicotiana tabacum HOM05D007181 ORTHO05D008722 4.1e-38 162.5 197 45.7
AUR62011964 Chenopodium quinoa HOM05D007181 ORTHO05D008722 9.1e-38 161.4 204 45.6
GSVIVG01003131001 Vitis vinifera HOM05D007181 ORTHO05D008722 2.0e-37 160.2 207 44.4
arahy.Tifrunner.gnm1.ann1.M9RGYA Arachis hypogaea HOM05D007181 ORTHO05D008722 3.4e-37 159.5 227 43.6
EL10Ac5g10486 Beta vulgaris HOM05D007181 ORTHO05D008722 3.4e-37 159.5 201 46.8
CAN.G575.12 Capsicum annuum HOM05D007181 ORTHO05D008722 2.9e-36 156.4 197 45.2
Peaxi162Scf00146g10111 Petunia axillaris HOM05D007181 ORTHO05D008722 1.1e-35 154.5 197 45.2
Lsat_1_v5_gn_5_185100 Lactuca sativa HOM05D007181 ORTHO05D008722 4.2e-35 152.5 193 42.5
Cc00_g18800 Coffea canephora HOM05D007181 ORTHO05D008722 2.7e-34 149.8 201 43.8
CDE06G2554 Ceratophyllum demersum HOM05D007181 ORTHO05D008722 6.1e-34 148.7 212 41.0
Haze_04637 Corylus avellana HOM05D000129 ORTHO05D000144 6.1e-34 148.7 198 43.9
Haze_04636 Corylus avellana HOM05D007181 ORTHO05D008722 1.4e-33 147.5 198 43.9
SalBow4G0298 Salvia bowleyana HOM05D007181 ORTHO05D008722 1.4e-33 147.5 200 42.0
SalBow4G3342 Salvia bowleyana HOM05D007181 ORTHO05D008722 1.4e-33 147.5 200 42.0
SalBow6G6987 Salvia bowleyana HOM05D007181 ORTHO05D008722 1.4e-33 147.5 194 41.8
Nn8g40634 Nelumbo nucifera HOM05D007181 ORTHO05D008722 1.8e-33 147.1 194 41.2
Lj2P1163T10 Lonicera japonica HOM05D007181 ORTHO05D008722 2.3e-33 146.7 173 48.0
Nn8g40635 Nelumbo nucifera HOM05D007181 ORTHO05D008722 5.2e-33 145.6 194 40.7
Prupe.8G234100 Prunus persica HOM05D007181 ORTHO05D008722 8.8e-33 144.8 190 43.2
CANSAT25G0029 Cannabis sativa HOM05D007181 ORTHO05D008722 1.1e-32 144.4 197 41.6
Potri.002G047400 Populus trichocarpa HOM05D007181 ORTHO05D008722 1.5e-32 144.1 194 44.3
HanXRQChr01g0005991 Helianthus annuus HOM05D007181 ORTHO05D008722 7.4e-32 141.7 196 41.8
MBI13_g01691_MAGBIO Magnolia biondii HOM05D007181 ORTHO05D008722 9.7e-32 141.4 204 40.7
Ah.11g050140 Amaranthus hybridus HOM05D007181 ORTHO05D008722 1.7e-31 140.6 200 40.5
Lj1g0009574 Lotus japonicus HOM05D007181 ORTHO05D008722 1.7e-31 140.6 197 43.1
SGA_v2.0_scaffold1G00542 Striga asiatica HOM05D007181 ORTHO05D008722 2.8e-31 139.8 200 42.0
HPP92_028259 Vanilla planifolia HOM05D007181 ORTHO05D008722 8.2e-31 138.3 141 51.1
Gohir.A05G078500 Gossypium hirsutum HOM05D000144 ORTHO05D008722 1.8e-30 137.1 193 41.5
RcHm_v2.0_Chr6g0289821 Rosa chinensis HOM05D007181 ORTHO05D008722 2.4e-30 136.7 199 39.7
Gorai.004G217700 Gossypium raimondii HOM05D007181 ORTHO05D008722 3.1e-30 136.3 192 42.7
Sabra02G0038300 Salix brachista HOM05D007181 ORTHO05D008722 7.0e-30 135.2 137 51.1
Aqoxy7G04176 Aquilegia oxysepala HOM05D007181 ORTHO05D008722 9.1e-30 134.8 135 49.6
Gorai.007G100900 Gossypium raimondii HOM05D007181 ORTHO05D008722 2.6e-29 133.3 193 42.0
Thecc.01G270500 Theobroma cacao HOM05D007181 ORTHO05D008722 2.6e-29 133.3 142 53.5
Oeu025775.1 Olea europaea HOM05D007181 ORTHO05D008722 7.7e-29 131.7 157 43.3
Os11g0616200 Oryza sativa ssp. japonica HOM05D007181 ORTHO05D008722 1.0e-28 131.3 198 40.4
CiPaw.08G110300 Carya illinoinensis HOM05D007181 ORTHO05D008722 1.7e-28 130.6 203 40.4
BcaC07g40807 Brassica carinata HOM05D007181 ORTHO05D008722 2.2e-28 130.2 132 48.5
C08p38020 Brassica napus HOM05D007181 ORTHO05D008722 2.2e-28 130.2 132 48.5
BolC8t51376H Brassica oleracea HOM05D007181 ORTHO05D008722 2.2e-28 130.2 132 48.5
Gohir.D11G094500 Gossypium hirsutum HOM05D007181 ORTHO05D008722 3.8e-28 129.4 193 42.0
A09p55080 Brassica napus HOM05D007181 ORTHO05D008722 6.5e-28 128.6 132 48.5
BraA09t40915Z Brassica rapa HOM05D007181 ORTHO05D008722 1.5e-27 127.5 132 47.7
Gohir.D08G205700 Gossypium hirsutum HOM05D007181 ORTHO05D008722 7.2e-27 125.2 134 51.5
Manes.05G082200 Manihot esculenta HOM05D007181 ORTHO05D008722 9.4e-27 124.8 199 41.2
Ciclev10022317m.g Citrus clementina HOM05D007181 ORTHO05D008722 1.2e-26 124.4 192 40.1
Phvul.001G155300 Phaseolus vulgaris HOM05D007181 ORTHO05D008722 1.2e-26 124.4 215 37.7
Duzib211G0516 Durio zibethinus HOM05D007181 ORTHO05D008722 2.7e-26 123.2 193 42.0
VMungo1383G2224 Vigna mungo HOM05D007181 ORTHO05D008722 3.6e-26 122.9 197 38.6
Gohir.A08G187400 Gossypium hirsutum HOM05D007181 ORTHO05D008722 6.1e-26 122.1 194 41.2
FvH4_2g22890 Fragaria vesca HOM05D007181 ORTHO05D008722 8.0e-26 121.7 196 38.8
PSO210G2677 Papaver somniferum HOM05D007181 ORTHO05D008722 1.0e-25 121.3 142 47.2
QL12p042395 Quercus lobata HOM05D007181 ORTHO05D008722 1.8e-25 120.6 198 39.4
Carub.0005s3001 Capsella rubella HOM05D007181 ORTHO05D008722 3.0e-25 119.8 126 47.6
Glyma.19G160000 Glycine max HOM05D007181 ORTHO05D008722 3.0e-25 119.8 201 40.8
Sp5g00160 Schrenkiella parvula HOM05D007181 ORTHO05D008722 4.0e-25 119.4 130 43.8
Medtr7g095740 Medicago truncatula HOM05D007181 ORTHO05D008722 6.7e-25 118.6 208 38.0
ClCG07G000510 Citrullus lanatus HOM05D007181 ORTHO05D008722 8.8e-25 118.2 167 43.1
MD03G1257200 Malus domestica HOM05D007181 ORTHO05D008722 8.8e-25 118.2 198 35.9
Gohir.A11G090066 Gossypium hirsutum HOM05D007181 ORTHO05D008722 3.3e-24 116.3 114 55.3
THA.LOC104817569 Tarenaya hassleriana HOM05D007181 ORTHO05D008722 3.3e-24 116.3 197 38.1
SEGI_03897 Sequoiadendron giganteum HOM05D007181 ORTHO05D008722 5.7e-24 115.5 134 47.0
COL.COLO4_09179 Corchorus olitorius HOM05D007181 ORTHO05D008722 9.7e-24 114.8 102 57.8
TPR.G19095 Trifolium pratense HOM05D007181 ORTHO05D008722 1.3e-23 114.4 151 43.7
AL5G46250 Arabidopsis lyrata HOM05D007181 ORTHO05D008722 1.7e-23 114.0 128 44.5
Sc05g0001150 Simmondsia chinensis HOM05D007181 ORTHO05D008722 2.2e-23 113.6 198 39.4
Ca_20981_v3 Cicer arietinum L. HOM05D007181 ORTHO05D008722 2.8e-23 113.2 149 45.6
MELO3C001156.2 Cucumis melo HOM05D007181 ORTHO05D008722 3.7e-23 112.8 103 58.3
Sed0014767 Sechium edule HOM05D007181 ORTHO05D008722 6.3e-23 112.1 195 38.5
Thhalv10006272m.g Eutrema salsugineum HOM05D007181 ORTHO05D008722 2.4e-22 110.2 130 42.3
PSO210G2070 Papaver somniferum HOM05D007181 ORTHO05D008722 4.1e-22 109.4 114 50.9
AT3G63390 Arabidopsis thaliana HOM05D007181 ORTHO05D008722 9.1e-22 108.2 99 52.5
Atru.chr5.1530 Acer truncatum HOM05D007181 ORTHO05D008722 2.0e-21 107.1 199 37.2
CARHR291580 Cardamine hirsuta HOM05D007181 ORTHO05D008722 3.5e-21 106.3 97 51.5
CsaV3_2G013840 Cucumis sativus L. HOM05D007181 ORTHO05D008722 3.5e-21 106.3 101 54.5
Pp3c24_16150 Physcomitrium patens HOM05D007181 ORTHO05D008722 3.5e-21 106.3 136 38.2
Zm00001eb166760 Zea mays HOM05D007181 ORTHO05D008722 4.5e-21 105.9 137 43.8
Aa31LG10G17220 Aethionema arabicum HOM05D007181 ORTHO05D008722 5.9e-21 105.5 203 34.0
Cpa.g.sc52.129 Carica papaya HOM05D007181 ORTHO05D008722 7.7e-21 105.1 108 50.9
BcaB03g13697 Brassica carinata HOM05D007181 ORTHO05D008722 1.3e-20 104.4 134 41.0
Pp3c8_19140 Physcomitrium patens HOM05D007181 ORTHO05D008722 1.3e-20 104.4 136 39.0
SMO143G0136 Selaginella moellendorffii HOM05D007181 ORTHO05D008722 2.2e-20 103.6 131 42.7
PGR044G0699 Punica granatum HOM05D007181 ORTHO05D008722 2.9e-20 103.2 188 36.7
FAN24G0107 Fragaria x ananassa HOM05D007181 ORTHO05D008722 5.5e-19 99.0 176 36.9
MD11G1277900 Malus domestica HOM05D007181 ORTHO05D008722 4.7e-18 95.9 177 33.3
TAR624G0264 Trochodendron aralioides HOM05D007181 ORTHO05D008722 4.7e-18 95.9 219 30.6
SHI10021 Sapria himalayana HOM05D007181 ORTHO05D008722 8.0e-18 95.1 105 48.6
AagrBONN_evm.TU.Sc2ySwM_362.2054 Anthoceros agrestis HOM05D007181 ORTHO05D008722 1.2e-16 91.3 102 46.1
BcaC07g42693 Brassica carinata HOM05D007181 ORTHO05D008722 3.4e-16 89.7 132 40.9
VMungo1215G0236 Vigna mungo HOM05D007181 ORTHO05D008722 3.4e-16 89.7 122 39.3
Mapoly0126s0033 Marchantia polymorpha HOM05D007181 ORTHO05D008722 8.6e-12 75.1 101 40.6
ATR0099G072 Amborella trichopoda HOM05D007181 ORTHO05D008722 2.1e-10 70.5 71 49.3
CBR_g39816 Chara braunii HOM05D007181 ORTHO05D008722 5.2e-09 65.9 90 38.9
Psat3g061320 Pisum sativum HOM05D007181 ORTHO05D008722 5.2e-09 65.9 68 47.1
ECA248G1721 Erigeron canadensis HOM05D007181 ORTHO05D008722 2.8e-07 60.1 96 35.4
SMO203G0031 Selaginella moellendorffii HOM05D007181 ORTHO05D008722 5.4e-06 55.8 63 44.4
ATR0099G083 Amborella trichopoda HOM05D007181 ORTHO05D008722 9.2e-06 55.1 64 42.2


User provided reference genes

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