Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro02107 Vaccinium macrocarpon HOM05D004278 ORTHO05D005544 1.6e-133 479.6 269 100.0
CSS0030568 Camellia sinensis var. sinensis HOM05D004278 ORTHO05D005544 7.9e-96 354.4 269 81.0
Dinv42064 Davidia involucrata HOM05D004278 ORTHO05D005544 1.8e-92 343.2 269 79.6
Hma1.2p1_0066F.1_g036410 Hydrangea macrophylla HOM05D004278 ORTHO05D005544 1.8e-92 343.2 269 78.8
Dinv23521 Davidia involucrata HOM05D004278 ORTHO05D005544 4.0e-92 342.0 269 79.2
Oeu055570.1 Olea europaea HOM05D004278 ORTHO05D005544 4.5e-91 338.6 269 77.7
Solyc01g109620.3 Solanum lycopersicum HOM05D004278 ORTHO05D005544 9.9e-91 337.4 270 78.1
Sopen01g051810 Solanum pennellii HOM05D004278 ORTHO05D005544 9.9e-91 337.4 270 78.1
PGSC0003DMG400000726 Solanum tuberosum HOM05D004278 ORTHO05D005544 9.9e-91 337.4 270 78.1
CAN.G1.42 Capsicum annuum HOM05D004278 ORTHO05D005544 1.3e-90 337.0 270 77.0
Nitab4.5_0005152g0090 Nicotiana tabacum HOM05D004278 ORTHO05D005544 1.3e-90 337.0 270 77.8
Rhsim11G0177100 Rhododendron simsii HOM05D004278 ORTHO05D005544 2.2e-90 336.3 269 79.2
Sopen10g023040 Solanum pennellii HOM05D004278 ORTHO05D005544 2.2e-90 336.3 270 77.8
PGSC0003DMG400033912 Solanum tuberosum HOM05D004278 ORTHO05D005544 2.2e-90 336.3 270 77.8
Actinidia27895 Actinidia chinensis HOM05D004278 ORTHO05D005544 6.4e-90 334.7 269 78.1
HanXRQChr05g0152721 Helianthus annuus HOM05D004278 ORTHO05D005544 8.4e-90 334.3 269 77.3
Solyc10g051350.2 Solanum lycopersicum HOM05D004278 ORTHO05D005544 1.4e-89 333.6 270 77.4
SalBow6G3946 Salvia bowleyana HOM05D004278 ORTHO05D005544 2.4e-89 332.8 269 77.3
SalBow6G5126 Salvia bowleyana HOM05D004278 ORTHO05D005544 2.4e-89 332.8 269 77.3
Nitab4.5_0004172g0100 Nicotiana tabacum HOM05D004278 ORTHO05D005544 5.5e-89 331.6 270 77.4
Lj2g0008973 Lotus japonicus HOM05D004278 ORTHO05D005544 7.1e-89 331.3 269 76.2
HanXRQChr16g0505671 Helianthus annuus HOM05D004278 ORTHO05D005544 2.1e-88 329.7 269 76.6
Peaxi162Scf00016g00727 Petunia axillaris HOM05D004278 ORTHO05D005544 2.1e-88 329.7 270 77.0
ECA240G2473 Erigeron canadensis HOM05D004278 ORTHO05D005544 3.5e-88 328.9 214 89.7
MSTRG.5398 Avicennia marina HOM05D004278 ORTHO05D005544 4.6e-88 328.6 212 90.1
DCAR_022973 Daucus carota HOM05D004278 ORTHO05D005544 4.6e-88 328.6 268 75.7
Migut.N01239 Erythranthe guttata HOM05D004278 ORTHO05D005544 6.0e-88 328.2 269 75.8
Cc02_g25830 Coffea canephora HOM05D004278 ORTHO05D005544 2.3e-87 326.2 269 75.5
Lsat_1_v5_gn_7_89240 Lactuca sativa HOM05D004278 ORTHO05D005544 3.0e-87 325.9 268 75.7
Lsat_1_v5_gn_9_108541 Lactuca sativa HOM05D004278 ORTHO05D005544 3.9e-87 325.5 269 75.5
Nitab4.5_0001361g0250 Nicotiana tabacum HOM05D004278 ORTHO05D005544 5.1e-87 325.1 211 91.0
EL10Ac9g21724 Beta vulgaris HOM05D004278 ORTHO05D005544 1.1e-86 323.9 269 76.2
SGA_v2.0_scaffold58G20535 Striga asiatica HOM05D004278 ORTHO05D005544 1.5e-86 323.6 198 95.5
CAN.G1412.6 Capsicum annuum HOM05D004278 ORTHO05D005544 1.9e-86 323.2 195 95.9
Ah.01g019390 Amaranthus hybridus HOM05D004278 ORTHO05D005544 9.6e-86 320.9 269 75.5
Ah.01g006270 Amaranthus hybridus HOM05D004278 ORTHO05D005544 1.3e-85 320.5 195 95.4
PSO541G5084 Papaver somniferum HOM05D004278 ORTHO05D005544 1.3e-85 320.5 269 74.7
Hund00270 Selenicereus undatus HOM05D004278 ORTHO05D005544 3.7e-85 318.9 269 75.1
PSO675G8903 Papaver somniferum HOM05D004278 ORTHO05D005544 4.8e-85 318.5 269 74.3
unitig_22.g5173 Utricularia gibba HOM05D004278 ORTHO05D005544 4.0e-84 315.5 202 90.6
Glyma.15G071900 Glycine max HOM05D004278 ORTHO05D005544 5.3e-84 315.1 269 74.3
arahy.Tifrunner.gnm1.ann1.673KA0 Arachis hypogaea HOM05D004278 ORTHO05D005544 6.9e-84 314.7 269 74.3
AUR62016737 Chenopodium quinoa HOM05D004278 ORTHO05D005544 6.9e-84 314.7 269 74.0
Glyma.13G241500 Glycine max HOM05D004278 ORTHO05D005544 6.9e-84 314.7 269 74.3
Manes.17G101100 Manihot esculenta HOM05D004278 ORTHO05D005544 6.9e-84 314.7 269 74.3
MD10G1076300 Malus domestica HOM05D004278 ORTHO05D005544 1.2e-83 313.9 269 74.3
VMungo0540G2365 Vigna mungo HOM05D004278 ORTHO05D005544 1.2e-83 313.9 269 74.3
AUR62011323 Chenopodium quinoa HOM05D004278 ORTHO05D005544 1.5e-83 313.5 269 74.0
Eucgr.I00724 Eucalyptus grandis HOM05D004278 ORTHO05D005544 2.6e-83 312.8 268 73.9
Cpa.g.sc62.151 Carica papaya HOM05D004278 ORTHO05D005544 3.4e-83 312.4 269 74.3
TAR628G0274 Trochodendron aralioides HOM05D004278 ORTHO05D005544 3.4e-83 312.4 269 74.3
Aqoxy2G01125 Aquilegia oxysepala HOM05D004278 ORTHO05D005544 7.6e-83 311.2 268 73.5
Gohir.A13G034300 Gossypium hirsutum HOM05D004278 ORTHO05D005544 7.6e-83 311.2 269 73.2
Gorai.013G037100 Gossypium raimondii HOM05D004278 ORTHO05D005544 7.6e-83 311.2 269 73.2
Lalb_Chr16g0387561 Lupinus albus HOM05D004278 ORTHO05D005544 7.6e-83 311.2 269 73.2
MD05G1066300 Malus domestica HOM05D004278 ORTHO05D005544 7.6e-83 311.2 269 73.6
PGR042G2304 Punica granatum HOM05D004278 ORTHO05D005544 7.6e-83 311.2 268 73.5
QL11p043693 Quercus lobata HOM05D004278 ORTHO05D005544 7.6e-83 311.2 267 72.7
Duzib132G1254 Durio zibethinus HOM05D004278 ORTHO05D005544 1.3e-82 310.5 212 88.2
Gohir.D02G215700 Gossypium hirsutum HOM05D004278 ORTHO05D005544 1.3e-82 310.5 270 74.4
Gorai.005G243700 Gossypium raimondii HOM05D004278 ORTHO05D005544 1.3e-82 310.5 270 74.4
Manes.15G163400 Manihot esculenta HOM05D004278 ORTHO05D005544 1.3e-82 310.5 269 73.2
GSVIVG01031966001 Vitis vinifera HOM05D004278 ORTHO05D005544 1.3e-82 310.5 268 73.5
Lalb_Chr09g0330921 Lupinus albus HOM05D004278 ORTHO05D005544 1.7e-82 310.1 269 73.2
Medtr8g010570 Medicago truncatula HOM05D004278 ORTHO05D005544 2.2e-82 309.7 269 72.9
Thecc.02G085200 Theobroma cacao HOM05D004278 ORTHO05D005544 2.2e-82 309.7 212 86.8
Gohir.D13G032700 Gossypium hirsutum HOM05D004278 ORTHO05D005544 2.9e-82 309.3 269 72.9
TWI31G1137 Tripterygium wilfordii HOM05D004278 ORTHO05D005544 2.9e-82 309.3 269 72.9
Gohir.A03G194500 Gossypium hirsutum HOM05D004278 ORTHO05D005544 3.8e-82 308.9 270 74.1
CsaV3_7G023570 Cucumis sativus L. HOM05D004278 ORTHO05D005544 4.9e-82 308.5 269 73.2
Prupe.8G096900 Prunus persica HOM05D004278 ORTHO05D005544 4.9e-82 308.5 269 74.0
Sed0011539 Sechium edule HOM05D004278 ORTHO05D005544 6.5e-82 308.1 269 72.9
ClCG02G005010 Citrullus lanatus HOM05D004278 ORTHO05D005544 8.4e-82 307.8 276 71.7
Nn5g29610 Nelumbo nucifera HOM05D004278 ORTHO05D005544 8.4e-82 307.8 269 73.2
Phvul.006G187900 Phaseolus vulgaris HOM05D004278 ORTHO05D005544 8.4e-82 307.8 269 72.9
TWI75G0915 Tripterygium wilfordii HOM05D004278 ORTHO05D005544 8.4e-82 307.8 269 72.5
MELO3C012522.2 Cucumis melo HOM05D004278 ORTHO05D005544 1.1e-81 307.4 269 72.9
Psat4g207360 Pisum sativum HOM05D004278 ORTHO05D005544 1.1e-81 307.4 269 72.1
CiPaw.05G064500 Carya illinoinensis HOM05D004278 ORTHO05D005544 1.4e-81 307.0 269 73.2
RcHm_v2.0_Chr7g0222141 Rosa chinensis HOM05D004278 ORTHO05D005544 2.5e-81 306.2 269 72.5
TPR.G9766 Trifolium pratense HOM05D004278 ORTHO05D005544 2.5e-81 306.2 269 72.1
Potri.009G116000 Populus trichocarpa HOM05D004278 ORTHO05D005544 3.2e-81 305.8 269 72.5
Atru.chr5.3016 Acer truncatum HOM05D004278 ORTHO05D005544 5.5e-81 305.1 269 71.7
Ca_17260_v3 Cicer arietinum L. HOM05D004278 ORTHO05D005544 5.5e-81 305.1 269 72.1
CANSAT01G0337 Cannabis sativa HOM05D004278 ORTHO05D005544 9.3e-81 304.3 269 71.7
BraA06t24427Z Brassica rapa HOM05D002153 ORTHO05D002137 1.2e-80 303.9 214 84.1
Haze_02384 Corylus avellana HOM05D004278 ORTHO05D005544 1.6e-80 303.5 269 72.9
FAN08G1460 Fragaria x ananassa HOM05D004278 ORTHO05D005544 2.1e-80 303.1 269 71.7
A06p12670 Brassica napus HOM05D004278 ORTHO05D005544 2.7e-80 302.8 217 84.8
CDE10G0378 Ceratophyllum demersum HOM05D004278 ORTHO05D005544 2.7e-80 302.8 213 84.5
COL.COLO4_25931 Corchorus olitorius HOM05D004278 ORTHO05D005544 2.7e-80 302.8 212 85.4
Ciclev10029226m.g Citrus clementina HOM05D004278 ORTHO05D005544 3.5e-80 302.4 269 71.0
Sp1g14840 Schrenkiella parvula HOM05D004278 ORTHO05D005544 3.5e-80 302.4 269 71.4
CARHR017160 Cardamine hirsuta HOM05D004278 ORTHO05D005544 4.6e-80 302.0 185 94.6
CARHR072680 Cardamine hirsuta HOM05D004278 ORTHO05D005544 4.6e-80 302.0 185 94.6
HPP92_001858 Vanilla planifolia HOM05D004278 ORTHO05D005544 4.6e-80 302.0 269 72.1
C05p14970 Brassica napus HOM05D004278 ORTHO05D005544 6.0e-80 301.6 200 89.0
THA.LOC104815454 Tarenaya hassleriana HOM05D004278 ORTHO05D005544 7.9e-80 301.2 185 95.1
Thhalv10008714m.g Eutrema salsugineum HOM05D004278 ORTHO05D005544 1.0e-79 300.8 185 94.6
AL1G28860 Arabidopsis lyrata HOM05D004278 ORTHO05D005544 1.3e-79 300.4 185 94.1
AT1G16700 Arabidopsis thaliana HOM05D004278 ORTHO05D005544 1.3e-79 300.4 185 94.1
Carub.0001s1643 Capsella rubella HOM05D004278 ORTHO05D005544 1.3e-79 300.4 185 94.1
FvH4_5g29280 Fragaria vesca HOM05D004278 ORTHO05D005544 1.3e-79 300.4 269 71.4
THA.LOC104804724 Tarenaya hassleriana HOM05D004278 ORTHO05D005544 1.3e-79 300.4 185 95.1
A07p27370 Brassica napus HOM05D004278 ORTHO05D005544 1.8e-79 300.1 212 84.0
BraA07t30378Z Brassica rapa HOM05D004278 ORTHO05D005544 1.8e-79 300.1 212 84.0
AL2G39470 Arabidopsis lyrata HOM05D004278 ORTHO05D005544 3.0e-79 299.3 185 93.5
AT1G79010 Arabidopsis thaliana HOM05D004278 ORTHO05D005544 3.0e-79 299.3 185 93.5
Carub.0002s2588 Capsella rubella HOM05D004278 ORTHO05D005544 3.0e-79 299.3 185 93.5
Thhalv10019110m.g Eutrema salsugineum HOM05D004278 ORTHO05D005544 3.0e-79 299.3 185 93.5
BcaB02g07191 Brassica carinata HOM05D004278 ORTHO05D005544 3.9e-79 298.9 185 93.5
BcaC08g45392 Brassica carinata HOM05D004278 ORTHO05D005544 3.9e-79 298.9 185 93.5
BcaC08g47465 Brassica carinata HOM05D004278 ORTHO05D005544 3.9e-79 298.9 185 93.5
A07p44150 Brassica napus HOM05D004278 ORTHO05D005544 3.9e-79 298.9 185 93.5
C06p30230 Brassica napus HOM05D004278 ORTHO05D005544 3.9e-79 298.9 185 93.5
C06p52880 Brassica napus HOM05D004278 ORTHO05D005544 3.9e-79 298.9 185 93.5
BolC6t38186H Brassica oleracea HOM05D004278 ORTHO05D005544 3.9e-79 298.9 185 93.5
BolC6t40306H Brassica oleracea HOM05D004278 ORTHO05D005544 3.9e-79 298.9 185 93.5
BraA07t31923Z Brassica rapa HOM05D004278 ORTHO05D005544 3.9e-79 298.9 185 93.5
Sp5g34060 Schrenkiella parvula HOM05D004278 ORTHO05D005544 3.9e-79 298.9 185 93.5
ATR0733G183 Amborella trichopoda HOM05D004278 ORTHO05D005544 8.7e-79 297.7 179 97.8
FAN18G1232 Fragaria x ananassa HOM05D004278 ORTHO05D005544 8.7e-79 297.7 269 71.0
Aa31LG7G1160 Aethionema arabicum HOM05D002153 ORTHO05D002137 2.5e-78 296.2 185 93.0
Aa31LG4G1970 Aethionema arabicum HOM05D003886 ORTHO05D004587 4.3e-78 295.4 185 93.0
MBI16_g28725_MAGBIO Magnolia biondii HOM05D004278 ORTHO05D005544 5.7e-78 295.0 192 91.1
Nitab4.5_0000308g0130 Nicotiana tabacum HOM05D004278 ORTHO05D005544 1.6e-77 293.5 184 94.0
Os03g0774200 Oryza sativa ssp. japonica HOM05D004278 ORTHO05D005544 2.4e-76 289.7 180 93.9
Hund06234 Selenicereus undatus HOM05D004278 ORTHO05D005544 6.9e-76 288.1 325 54.2
Zm00001eb059090 Zea mays HOM05D004278 ORTHO05D005544 9.0e-76 287.7 180 92.8
SEGI_37571 Sequoiadendron giganteum HOM05D004278 ORTHO05D005544 8.5e-74 281.2 185 89.2
Lj5A197T63 Lonicera japonica HOM05D004278 ORTHO05D005544 5.5e-73 278.5 168 97.0
BcaC05g25531 Brassica carinata HOM05D002153 ORTHO05D002137 2.1e-72 276.6 185 89.7
SGA_v2.0_scaffold32G13166 Striga asiatica HOM05D004278 ORTHO05D005544 1.1e-70 270.8 237 73.4
Duzib052G0763 Durio zibethinus HOM05D004278 ORTHO05D005544 4.3e-70 268.9 218 78.4
Sc18g0004460 Simmondsia chinensis HOM05D004278 ORTHO05D005544 3.1e-68 262.7 237 73.0
Pp3c15_4330 Physcomitrium patens HOM05D004278 ORTHO05D005544 9.1e-68 261.2 187 83.4
Pp3c9_8460 Physcomitrium patens HOM05D004278 ORTHO05D005544 9.1e-68 261.2 184 85.3
BolC5t30212H Brassica oleracea HOM05D004278 ORTHO05D005544 4.5e-67 258.8 200 77.0
Mapoly0008s0062 Marchantia polymorpha HOM05D004278 ORTHO05D005544 7.7e-67 258.1 166 89.8
SMO228G0074 Selaginella moellendorffii HOM05D004278 ORTHO05D005544 1.1e-65 254.2 164 90.2
CBR_g34677 Chara braunii HOM05D004278 ORTHO05D005544 1.4e-65 253.8 169 88.2
arahy.Tifrunner.gnm1.ann1.Z91YIY Arachis hypogaea HOM05D004278 ORTHO05D005544 7.2e-65 251.5 237 70.5
Gohir.A12G028800 Gossypium hirsutum HOM05D004278 ORTHO05D005544 3.0e-63 246.1 180 82.2
Actinidia17816 Actinidia chinensis HOM05D004278 ORTHO05D005544 8.8e-63 244.6 148 98.6
Glyma.05G236100 Glycine max HOM05D004278 ORTHO05D005544 3.1e-60 236.1 148 91.9
MCO04G399 Micromonas commoda HOM05D004278 ORTHO05D005544 9.1e-60 234.6 187 77.0
CSS0043835 Camellia sinensis var. sinensis HOM05D004278 ORTHO05D005544 4.5e-59 232.3 178 73.0
Gorai.008G028900 Gossypium raimondii HOM05D004278 ORTHO05D005544 2.9e-58 229.6 209 62.2
Cre12.g496750 Chlamydomonas reinhardtii HOM05D004278 ORTHO05D005544 1.2e-56 224.2 178 78.7
PRCOL_00001402 Prasinoderma coloniale HOM05D004278 ORTHO05D005544 1.4e-55 220.7 199 68.8
CDE10G0028 Ceratophyllum demersum HOM05D004278 ORTHO05D005544 3.0e-55 219.5 137 96.4
Haze_27004 Corylus avellana HOM05D004278 ORTHO05D005544 3.1e-52 209.5 185 70.3
Zm00001eb213750 Zea mays HOM05D004278 ORTHO05D005544 3.5e-51 206.1 110 89.1
Potri.004G154900 Populus trichocarpa HOM05D004278 ORTHO05D005544 1.3e-50 204.1 132 95.5
AagrBONN_evm.TU.Sc2ySwM_117.1035 Anthoceros agrestis HOM05D004278 ORTHO05D005544 2.2e-50 203.4 153 82.4
Cfa025738 Carpinus fangiana HOM05D004278 ORTHO05D005544 2.1e-48 196.8 162 75.3
Gohir.D12G028300 Gossypium hirsutum HOM05D004278 ORTHO05D005544 4.0e-47 192.6 227 53.7
TAR376G0025 Trochodendron aralioides HOM05D002092 ORTHO05D005410 6.3e-45 185.3 125 74.4
Ca_17266_v3 Cicer arietinum L. HOM05D004278 ORTHO05D005544 4.1e-44 182.6 178 58.4
Lj2g0023328 Lotus japonicus HOM05D004278 ORTHO05D005544 1.2e-43 181.0 137 70.1
HPP92_001874 Vanilla planifolia HOM05D004278 ORTHO05D431721 1.0e-34 151.4 124 66.9
TAR625G0183 Trochodendron aralioides HOM05D004278 ORTHO05D416112 8.0e-32 141.7 127 60.6
Sc08g0000500 Simmondsia chinensis HOM05D004278 ORTHO05D021139 3.1e-28 129.8 92 72.8
Thhalv10017872m.g Eutrema salsugineum HOM05D004278 ORTHO05D005544 1.0e-23 114.8 185 42.7
Lsat_1_v5_gn_5_118541 Lactuca sativa HOM05D004278 ORTHO05D021139 1.7e-18 97.4 109 50.5
TAR376G0081 Trochodendron aralioides HOM05D004278 ORTHO05D021139 1.7e-18 97.4 47 100.0
HanXRQChr15g0486481 Helianthus annuus HOM05D004278 ORTHO05D021139 4.3e-17 92.8 78 65.4
Ca_28908_v3 Cicer arietinum L. HOM05D004278 ORTHO05D004593 1.8e-07 60.8 109 44.0
Lsat_1_v5_gn_3_134741 Lactuca sativa HOM05D004278 ORTHO05D021139 1.8e-07 60.8 60 53.3


User provided reference genes

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