Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro01428 Vaccinium macrocarpon HOM05D004215 ORTHO05D005293 1.8e-154 549.3 295 100.0
Rhsim09G0069000 Rhododendron simsii HOM05D004215 ORTHO05D005293 1.7e-59 233.8 129 89.9
CSS0048780 Camellia sinensis var. sinensis HOM05D004215 ORTHO05D005293 5.6e-55 218.8 160 71.2
Dinv16170 Davidia involucrata HOM05D004215 ORTHO05D005293 5.3e-53 212.2 159 68.6
Actinidia15237 Actinidia chinensis HOM05D004215 ORTHO05D005293 1.3e-51 207.6 129 77.5
Ciclev10016124m.g Citrus clementina HOM05D004215 ORTHO05D005293 4.9e-51 205.7 129 76.0
CSS0000916 Camellia sinensis var. sinensis HOM05D004215 ORTHO05D005293 1.1e-50 204.5 159 74.2
TAR629G2922 Trochodendron aralioides HOM05D004215 ORTHO05D005293 2.5e-50 203.4 161 65.8
Actinidia36693 Actinidia chinensis HOM05D004215 ORTHO05D005293 3.2e-50 203.0 129 75.2
Eucgr.B02879 Eucalyptus grandis HOM05D004215 ORTHO05D005293 4.2e-50 202.6 129 74.4
Manes.14G110200 Manihot esculenta HOM05D004215 ORTHO05D005293 5.5e-50 202.2 155 64.5
Actinidia14939 Actinidia chinensis HOM05D004215 ORTHO05D005293 7.1e-50 201.8 128 75.8
A06p11150 Brassica napus HOM05D004215 ORTHO05D005293 9.3e-50 201.4 129 73.6
BraA06t24295Z Brassica rapa HOM05D004215 ORTHO05D005293 9.3e-50 201.4 129 73.6
QL01p002798 Quercus lobata HOM05D004215 ORTHO05D005293 1.6e-49 200.7 129 73.6
Thhalv10008333m.g Eutrema salsugineum HOM05D004215 ORTHO05D005293 2.1e-49 200.3 129 71.3
Haze_00697 Corylus avellana HOM05D004215 ORTHO05D005293 2.7e-49 199.9 129 75.2
Cfa015796 Carpinus fangiana HOM05D004215 ORTHO05D005293 6.1e-49 198.7 163 63.8
Glyma.10G267000 Glycine max HOM05D004215 ORTHO05D005293 6.1e-49 198.7 159 64.2
MD16G1033500 Malus domestica HOM05D004215 ORTHO05D005293 6.1e-49 198.7 164 62.8
CANSAT01G2004 Cannabis sativa HOM05D004215 ORTHO05D005293 7.9e-49 198.4 160 63.1
Cpa.g.sc65.98 Carica papaya HOM05D004215 ORTHO05D005293 7.9e-49 198.4 127 73.2
Potri.008G126700 Populus trichocarpa HOM05D004215 ORTHO05D005293 7.9e-49 198.4 129 75.2
Actinidia31987 Actinidia chinensis HOM05D004215 ORTHO05D005293 1.0e-48 198.0 127 78.0
Aa31LG1G20 Aethionema arabicum HOM05D004215 ORTHO05D005293 1.0e-48 198.0 129 70.5
BcaC05g25445 Brassica carinata HOM05D004215 ORTHO05D005293 1.0e-48 198.0 129 72.9
C05p13270 Brassica napus HOM05D004215 ORTHO05D005293 1.0e-48 198.0 129 72.9
BolC5t30064H Brassica oleracea HOM05D004215 ORTHO05D005293 1.0e-48 198.0 129 72.9
Sopen05g004280 Solanum pennellii HOM05D004215 ORTHO05D005293 1.0e-48 198.0 128 73.4
Solyc05g008450.3 Solanum lycopersicum HOM05D004215 ORTHO05D005293 1.3e-48 197.6 157 63.7
MD13G1031300 Malus domestica HOM05D004215 ORTHO05D005293 1.8e-48 197.2 164 61.6
CiPaw.06G014700 Carya illinoinensis HOM05D004215 ORTHO05D005293 2.3e-48 196.8 159 62.3
Potri.010G116500 Populus trichocarpa HOM05D004215 ORTHO05D005293 2.3e-48 196.8 129 72.9
Atru.chr11.354 Acer truncatum HOM05D004215 ORTHO05D005293 3.0e-48 196.4 129 72.1
Phvul.007G035000 Phaseolus vulgaris HOM05D004215 ORTHO05D005293 3.0e-48 196.4 129 73.6
Carub.0001s1491 Capsella rubella HOM05D004215 ORTHO05D005293 3.9e-48 196.1 129 69.8
BcaC07g38770 Brassica carinata HOM05D004215 ORTHO05D005293 5.1e-48 195.7 128 71.1
C08p17030 Brassica napus HOM05D004215 ORTHO05D005293 5.1e-48 195.7 128 71.1
Gohir.D05G319000 Gossypium hirsutum HOM05D004215 ORTHO05D005293 5.1e-48 195.7 129 72.9
Gorai.009G341900 Gossypium raimondii HOM05D004215 ORTHO05D005293 5.1e-48 195.7 129 72.9
Nitab4.5_0000350g0220 Nicotiana tabacum HOM05D004215 ORTHO05D005293 5.1e-48 195.7 129 71.3
Ca_23697_v3 Cicer arietinum L. HOM05D004215 ORTHO05D005293 6.7e-48 195.3 129 71.3
MBI16_g21171_MAGBIO Magnolia biondii HOM05D004215 ORTHO05D005293 6.7e-48 195.3 161 62.1
BcaB03g13074 Brassica carinata HOM05D004215 ORTHO05D005293 8.7e-48 194.9 128 71.9
Glyma.20G123700 Glycine max HOM05D004215 ORTHO05D005293 8.7e-48 194.9 129 74.4
A08p31720 Brassica napus HOM05D004215 ORTHO05D005293 1.1e-47 194.5 128 71.1
BraA08t35094Z Brassica rapa HOM05D004215 ORTHO05D005293 1.1e-47 194.5 128 71.1
Nitab4.5_0000293g0040 Nicotiana tabacum HOM05D004215 ORTHO05D005293 1.1e-47 194.5 129 71.3
Thecc.02G217400 Theobroma cacao HOM05D004215 ORTHO05D005293 1.1e-47 194.5 129 71.3
BolC8t49328H Brassica oleracea HOM05D004215 ORTHO05D005293 1.5e-47 194.1 128 70.3
PGSC0003DMG400030559 Solanum tuberosum HOM05D004215 ORTHO05D005293 1.5e-47 194.1 128 72.7
Lj3A876G45 Lonicera japonica HOM05D004215 ORTHO05D005293 2.5e-47 193.4 158 62.7
ClCG05G022300 Citrullus lanatus HOM05D004215 ORTHO05D005293 4.3e-47 192.6 127 72.4
TWI79G1401 Tripterygium wilfordii HOM05D004215 ORTHO05D005293 4.3e-47 192.6 129 69.8
AUR62014123 Chenopodium quinoa HOM05D004215 ORTHO05D005293 7.4e-47 191.8 159 60.4
Nn4g24046 Nelumbo nucifera HOM05D004215 ORTHO05D005293 7.4e-47 191.8 129 72.1
Peaxi162Scf00205g00925 Petunia axillaris HOM05D004215 ORTHO05D005293 7.4e-47 191.8 128 70.3
Psat6g222520 Pisum sativum HOM05D004215 ORTHO05D005293 7.4e-47 191.8 129 70.5
SalBow8G1964 Salvia bowleyana HOM05D004215 ORTHO05D005293 7.4e-47 191.8 131 70.2
THA.LOC104805048 Tarenaya hassleriana HOM05D004215 ORTHO05D005293 7.4e-47 191.8 128 71.9
Lsat_1_v5_gn_8_41661 Lactuca sativa HOM05D004215 ORTHO05D005293 1.3e-46 191.0 129 72.1
Sabra10G0086200 Salix brachista HOM05D004215 ORTHO05D005293 1.3e-46 191.0 129 69.8
Sabra10G0087900 Salix brachista HOM05D004215 ORTHO05D005293 1.3e-46 191.0 129 69.8
CiPaw.05G246100 Carya illinoinensis HOM05D004215 ORTHO05D005293 1.6e-46 190.7 129 71.3
Prupe.1G320800 Prunus persica HOM05D004215 ORTHO05D005293 1.6e-46 190.7 128 71.1
Hund25007 Selenicereus undatus HOM05D004215 ORTHO05D005293 2.2e-46 190.3 128 69.5
Duzib251G0621 Durio zibethinus HOM05D004215 ORTHO05D005293 2.8e-46 189.9 129 70.5
Gohir.A05G317200 Gossypium hirsutum HOM05D004215 ORTHO05D005293 2.8e-46 189.9 129 71.3
RcHm_v2.0_Chr4g0433881 Rosa chinensis HOM05D004215 ORTHO05D005293 2.8e-46 189.9 164 61.0
AL1G27210 Arabidopsis lyrata HOM05D004215 ORTHO05D005293 3.7e-46 189.5 129 67.4
AT1G15140 Arabidopsis thaliana HOM05D004215 ORTHO05D005293 3.7e-46 189.5 129 66.7
Lj5g0023519 Lotus japonicus HOM05D004215 ORTHO05D005293 3.7e-46 189.5 129 69.8
VMungo0720G1296 Vigna mungo HOM05D004215 ORTHO05D005293 3.7e-46 189.5 129 70.5
CARHR015680 Cardamine hirsuta HOM05D004215 ORTHO05D005293 4.8e-46 189.1 128 68.0
AUR62002761 Chenopodium quinoa HOM05D004215 ORTHO05D005293 4.8e-46 189.1 129 68.2
Oeu004319.1 Olea europaea HOM05D004215 ORTHO05D005293 6.3e-46 188.7 129 70.5
arahy.Tifrunner.gnm1.ann1.BMT3C6 Arachis hypogaea HOM05D004215 ORTHO05D005293 8.2e-46 188.3 162 59.3
SGA_v2.0_scaffold14G06920 Striga asiatica HOM05D004215 ORTHO05D005293 8.2e-46 188.3 130 68.5
Migut.E00397 Erythranthe guttata HOM05D004215 ORTHO05D005293 1.1e-45 188.0 129 69.8
HanXRQChr15g0466211 Helianthus annuus HOM05D004215 ORTHO05D005293 1.4e-45 187.6 129 69.0
arahy.Tifrunner.gnm1.ann1.IPKA5V Arachis hypogaea HOM05D004215 ORTHO05D005293 1.8e-45 187.2 162 58.6
Migut.L00828 Erythranthe guttata HOM05D004215 ORTHO05D005293 1.8e-45 187.2 129 70.5
CsaV3_5G034820 Cucumis sativus L. HOM05D004215 ORTHO05D005293 2.4e-45 186.8 127 69.3
Lalb_Chr17g0338761 Lupinus albus HOM05D004215 ORTHO05D005293 3.1e-45 186.4 128 70.3
Medtr1g108710 Medicago truncatula HOM05D004215 ORTHO05D005293 3.1e-45 186.4 129 68.2
MSTRG.13568 Avicennia marina HOM05D004215 ORTHO05D005293 4.1e-45 186.0 129 69.8
COL.COLO4_15325 Corchorus olitorius HOM05D004215 ORTHO05D005293 5.3e-45 185.7 163 58.9
Migut.L00651 Erythranthe guttata HOM05D004215 ORTHO05D005293 5.3e-45 185.7 129 69.8
TWI31G0297 Tripterygium wilfordii HOM05D004215 ORTHO05D005293 5.3e-45 185.7 159 58.5
MELO3C012293.2 Cucumis melo HOM05D004215 ORTHO05D005293 9.0e-45 184.9 166 58.4
Lalb_Chr06g0165701 Lupinus albus HOM05D004215 ORTHO05D005293 9.0e-45 184.9 129 68.2
DCAR_023619 Daucus carota HOM05D004215 ORTHO05D005293 1.2e-44 184.5 129 69.0
Sed0020304 Sechium edule HOM05D004215 ORTHO05D005293 2.6e-44 183.3 127 67.7
BcaB02g06582 Brassica carinata HOM05D004215 ORTHO05D005293 3.4e-44 183.0 123 70.7
FAN17G1658 Fragaria x ananassa HOM05D004215 ORTHO05D005293 3.4e-44 183.0 129 69.8
FvH4_4g26280 Fragaria vesca HOM05D004215 ORTHO05D005293 1.0e-43 181.4 129 69.0
FAN07G0674 Fragaria x ananassa HOM05D004215 ORTHO05D005293 1.0e-43 181.4 129 69.0
FAN12G1757 Fragaria x ananassa HOM05D004215 ORTHO05D005293 1.0e-43 181.4 129 69.0
FAN22G1507 Fragaria x ananassa HOM05D004215 ORTHO05D005293 1.3e-43 181.0 129 69.0
unitig_699.g19481 Utricularia gibba HOM05D004215 ORTHO05D005293 1.7e-43 180.6 129 69.0
FAN12G4108 Fragaria x ananassa HOM05D004215 ORTHO05D005293 2.2e-43 180.3 129 69.0
Sc14g0007220 Simmondsia chinensis HOM05D004215 ORTHO05D005293 2.9e-43 179.9 127 67.7
SGA_v2.0_scaffold50G18535 Striga asiatica HOM05D004215 ORTHO05D005293 2.9e-43 179.9 129 68.2
ECA233G2791 Erigeron canadensis HOM05D004215 ORTHO05D005293 6.5e-43 178.7 129 67.4
PGR119G1032 Punica granatum HOM05D004215 ORTHO05D005293 8.5e-43 178.3 127 70.1
HPP92_021849 Vanilla planifolia HOM05D004215 ORTHO05D005293 1.1e-42 177.9 129 69.8
PGR102G1684 Punica granatum HOM05D004215 ORTHO05D005293 2.5e-42 176.8 128 67.2
MSTRG.2195 Avicennia marina HOM05D004215 ORTHO05D005293 5.5e-42 175.6 129 66.7
CAN.G1489.9 Capsicum annuum HOM05D004215 ORTHO05D005293 1.2e-41 174.5 128 65.6
BolC5t33841H Brassica oleracea HOM05D004215 ORTHO05D005293 3.6e-41 172.9 130 65.4
Sed0017516 Sechium edule HOM05D004215 ORTHO05D005293 5.1e-40 169.1 127 64.6
PSO478G0614 Papaver somniferum HOM05D004215 ORTHO05D005293 1.5e-39 167.5 129 58.9
PSO017G7108 Papaver somniferum HOM05D004215 ORTHO05D005293 5.7e-39 165.6 129 57.4
SHI16315 Sapria himalayana HOM05D004215 ORTHO05D005293 5.7e-39 165.6 127 65.4
CDE06G1149 Ceratophyllum demersum HOM05D004215 ORTHO05D005293 7.4e-39 165.2 122 64.8
EL10Ac6g14267 Beta vulgaris HOM05D004215 ORTHO05D005293 9.7e-39 164.9 168 54.2
Sp1g13480 Schrenkiella parvula HOM05D004215 ORTHO05D005293 2.9e-35 153.3 101 70.3
Aqoxy3G00166 Aquilegia oxysepala HOM05D004215 ORTHO05D005293 1.4e-34 151.0 129 60.5
Hma1.2p1_0114F.1_g055430 Hydrangea macrophylla HOM05D004215 ORTHO05D005293 1.4e-34 151.0 159 52.2
Os02g0328300 Oryza sativa ssp. japonica HOM05D004215 ORTHO05D005293 6.1e-33 145.6 130 56.2
SEGI_29541 Sequoiadendron giganteum HOM05D004215 ORTHO05D005293 1.5e-31 141.0 128 49.2
AagrBONN_evm.TU.Sc2ySwM_228.3165 Anthoceros agrestis HOM05D004215 ORTHO05D005293 2.0e-31 140.6 128 53.1
Mapoly0004s0030 Marchantia polymorpha HOM05D004215 ORTHO05D005293 3.3e-31 139.8 128 50.0
SMO174G0012 Selaginella moellendorffii HOM05D004215 ORTHO05D005293 3.3e-31 139.8 128 50.0
DCAR_030188 Daucus carota HOM05D004215 ORTHO05D005293 1.3e-30 137.9 125 56.8
ATR0691G234 Amborella trichopoda HOM05D004215 ORTHO05D005293 8.2e-30 135.2 159 45.3
Pp3c16_22650 Physcomitrium patens HOM05D004215 ORTHO05D005293 3.5e-28 129.8 128 47.7
arahy.Tifrunner.gnm1.ann1.B59VJ6 Arachis hypogaea HOM05D004215 ORTHO05D005293 1.0e-27 128.3 132 49.2
Actinidia33607 Actinidia chinensis HOM05D004215 ORTHO05D005293 6.5e-27 125.6 132 46.2
Zm00001eb241500 Zea mays HOM05D004215 ORTHO05D005293 1.5e-26 124.4 130 49.2
BolC2t11573H Brassica oleracea HOM05D004215 ORTHO05D005293 2.2e-22 110.5 99 57.6
CDE04G0818 Ceratophyllum demersum HOM05D004215 ORTHO05D005293 1.4e-21 107.8 84 59.5
BcaB07g30283 Brassica carinata HOM05D004215 ORTHO05D005293 2.4e-21 107.1 74 68.9
Zm00001eb121490 Zea mays HOM05D004215 ORTHO05D005293 7.7e-20 102.1 138 48.6
C02p55250 Brassica napus HOM05D004215 ORTHO05D005293 1.6e-17 94.4 138 41.3
Cre01.g000350 Chlamydomonas reinhardtii HOM05D004215 ORTHO05D005293 1.6e-17 94.4 116 44.8
BcaC03g17546 Brassica carinata HOM05D004215 ORTHO05D005293 1.7e-14 84.3 76 56.6
Os01g0120600 Oryza sativa ssp. japonica HOM05D004215 ORTHO05D005293 1.4e-13 81.3 101 46.5
Actinidia33626 Actinidia chinensis HOM05D004215 ORTHO05D005293 3.1e-13 80.1 65 66.2
MCO13G089 Micromonas commoda HOM05D004215 ORTHO05D005293 3.1e-13 80.1 100 44.0
SMO201G0141 Selaginella moellendorffii HOM05D028400 ORTHO05D005293 3.1e-13 80.1 69 50.7
CBR_g23714 Chara braunii HOM05D004215 ORTHO05D005293 1.2e-12 78.2 87 49.4
Actinidia33606 Actinidia chinensis HOM05D004215 ORTHO05D005293 2.9e-11 73.6 87 47.1
RcHm_v2.0_Chr2g0123901 Rosa chinensis HOM05D004215 ORTHO05D005293 9.4e-10 68.6 49 61.2
GSVIVG01011796001 Vitis vinifera HOM05D004215 ORTHO05D005293 2.8e-06 57.0 28 85.7


User provided reference genes

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