Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro01230 Vaccinium macrocarpon HOM05D009663 ORTHO05D007789 2.4e-133 478.8 237 100.0
vmacro05103 Vaccinium macrocarpon HOM05D009663 ORTHO05D007789 4.7e-20 102.4 233 35.2
Rhsim12G0082000 Rhododendron simsii HOM05D009663 ORTHO05D007789 2.4e-19 100.1 142 40.8
Rhsim13G0019200 Rhododendron simsii HOM05D009663 ORTHO05D007789 2.9e-17 93.2 248 35.5
Rhsim12G0082100 Rhododendron simsii HOM05D009663 ORTHO05D007789 4.9e-17 92.4 205 31.2
Rhsim06G0038200 Rhododendron simsii HOM05D038451 ORTHO05D007789 8.4e-17 91.7 149 40.9
vmacro14314 Vaccinium macrocarpon HOM05D009663 ORTHO05D007789 1.9e-16 90.5 199 34.7
Rhsim06G0044600 Rhododendron simsii HOM05D009663 ORTHO05D007789 5.4e-16 89.0 144 34.7
Rhsim13G0014700 Rhododendron simsii HOM05D009663 ORTHO05D007789 7.1e-16 88.6 154 40.3
Rhsim06G0038400 Rhododendron simsii HOM05D038451 ORTHO05D007789 1.6e-15 87.4 155 37.4
Rhsim06G0038100 Rhododendron simsii HOM05D038451 ORTHO05D007789 3.5e-15 86.3 154 40.9
Rhsim07G0120300 Rhododendron simsii HOM05D009663 ORTHO05D007789 2.5e-13 80.1 145 36.6
Rhsim12G0199400 Rhododendron simsii HOM05D009663 ORTHO05D007789 2.5e-13 80.1 139 33.1
CSS0009631 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 4.0e-11 72.8 131 35.9
Rhsim10G0165100 Rhododendron simsii HOM05D009663 ORTHO05D007789 1.2e-10 71.2 136 35.3
vmacro13892 Vaccinium macrocarpon HOM05D000906 ORTHO05D000713 2.0e-10 70.5 133 33.1
Rhsim10G0206900 Rhododendron simsii HOM05D009663 ORTHO05D007789 2.6e-10 70.1 134 32.8
TWI36G0611 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 2.6e-10 70.1 138 29.7
Rhsim07G0120100 Rhododendron simsii HOM05D009663 ORTHO05D007789 3.4e-10 69.7 124 35.5
Sed0001543 Sechium edule HOM05D008623 ORTHO05D007789 1.3e-09 67.8 139 32.4
CSS0027810 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 2.2e-09 67.0 117 37.6
Rhsim12G0034900 Rhododendron simsii HOM05D042119 ORTHO05D007789 2.2e-09 67.0 139 32.4
Rhsim04G0228800 Rhododendron simsii HOM05D009663 ORTHO05D011812 3.8e-09 66.2 139 31.7
PGSC0003DMG402028118 Solanum tuberosum HOM05D001907 ORTHO05D015557 1.1e-08 64.7 118 27.1
Rhsim12G0199500 Rhododendron simsii HOM05D000727 ORTHO05D000541 2.4e-08 63.5 121 31.4
Rhsim10G0207200 Rhododendron simsii HOM05D009663 ORTHO05D007789 3.2e-08 63.2 155 30.3
CSS0008461 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 5.4e-08 62.4 130 33.1
Dinv04048 Davidia involucrata HOM05D000041 ORTHO05D019419 5.4e-08 62.4 117 30.8
Rhsim09G0029000 Rhododendron simsii HOM05D009663 ORTHO05D007789 5.4e-08 62.4 139 31.7
Hma1.2p1_0785F.1_g217500 Hydrangea macrophylla HOM05D008623 ORTHO05D007789 7.1e-08 62.0 116 33.6
Rhsim04G0228600 Rhododendron simsii HOM05D009663 ORTHO05D011812 7.1e-08 62.0 136 30.9
Sed0015244 Sechium edule HOM05D008623 ORTHO05D007789 9.3e-08 61.6 139 30.2
PGSC0003DMG400006633 Solanum tuberosum HOM05D010354 ORTHO05D012840 1.6e-07 60.8 119 28.6
CSS0009704 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 2.1e-07 60.5 130 32.3
QL10p030347 Quercus lobata HOM05D019990 ORTHO05D007789 2.7e-07 60.1 134 29.9
Sed0024472 Sechium edule HOM05D034586 ORTHO05D007789 2.7e-07 60.1 138 27.5
Sopen02g016420 Solanum pennellii HOM05D010354 ORTHO05D012840 2.7e-07 60.1 116 31.0
CSS0001693 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 3.5e-07 59.7 130 31.5
Dinv41569 Davidia involucrata HOM05D008623 ORTHO05D007789 3.5e-07 59.7 135 29.6
Nitab4.5_0004672g0020 Nicotiana tabacum HOM05D010354 ORTHO05D012840 6.0e-07 58.9 132 26.5
TWI73G0112 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 6.0e-07 58.9 118 27.1
CSS0000671 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 7.9e-07 58.5 130 31.5
CSS0007245 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 7.9e-07 58.5 130 31.5
Lj1A786G23 Lonicera japonica HOM05D011954 ORTHO05D014236 1.0e-06 58.2 140 28.6
Sed0008488 Sechium edule HOM05D034586 ORTHO05D007789 1.0e-06 58.2 121 28.9
Peaxi162Scf00045g00629 Petunia axillaris HOM05D010354 ORTHO05D012840 1.3e-06 57.8 135 25.9
PGSC0003DMG402009490 Solanum tuberosum HOM05D010354 ORTHO05D012840 1.3e-06 57.8 136 26.5
Carub.0002s0168 Capsella rubella HOM05D007210 ORTHO05D006152 1.7e-06 57.4 79 39.2
Duzib168G1026 Durio zibethinus HOM05D016489 ORTHO05D007789 2.3e-06 57.0 152 28.3
Duzib168G1555 Durio zibethinus HOM05D016489 ORTHO05D007789 2.3e-06 57.0 131 30.5
Duzib168G2238 Durio zibethinus HOM05D016489 ORTHO05D007789 2.3e-06 57.0 152 28.3
Sed0026611 Sechium edule HOM05D008623 ORTHO05D007789 2.3e-06 57.0 128 31.2
TWI73G0560 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 2.3e-06 57.0 122 27.0
TWI73G1234 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 2.3e-06 57.0 122 27.0
CiPaw.10G106500 Carya illinoinensis HOM05D010787 ORTHO05D011812 3.0e-06 56.6 126 27.8
CiPaw.10G106200 Carya illinoinensis HOM05D010787 ORTHO05D011812 3.9e-06 56.2 126 27.8
RhsimUnG0120400 Rhododendron simsii HOM05D009663 ORTHO05D007789 3.9e-06 56.2 205 27.3
CiPaw.10G108400 Carya illinoinensis HOM05D010787 ORTHO05D011812 6.6e-06 55.5 126 27.0
Sed0015950 Sechium edule HOM05D034586 ORTHO05D007789 6.6e-06 55.5 135 28.1


User provided reference genes

Program Settings