Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro00974 Vaccinium macrocarpon HOM05D006270 ORTHO05D007755 1.0e-171 606.7 306 100.0
Rhsim12G0005700 Rhododendron simsii HOM05D006270 ORTHO05D007755 6.6e-131 471.1 312 81.7
Actinidia23030 Actinidia chinensis HOM05D006270 ORTHO05D007755 5.8e-87 325.1 283 64.0
Dinv03143 Davidia involucrata HOM05D006270 ORTHO05D007755 8.4e-86 321.2 310 59.0
GSVIVG01026015001 Vitis vinifera HOM05D006270 ORTHO05D007755 4.8e-81 305.4 288 60.8
TAR628G1531 Trochodendron aralioides HOM05D006270 ORTHO05D007755 4.0e-80 302.4 288 59.4
Thecc.03G315400 Theobroma cacao HOM05D006270 ORTHO05D007755 6.7e-75 285.0 219 63.9
Lj3g0009409 Lotus japonicus HOM05D006270 ORTHO05D007755 1.9e-74 283.5 250 60.4
QL09p054436 Quercus lobata HOM05D006270 ORTHO05D007755 5.6e-74 282.0 234 65.0
Glyma.08G240100 Glycine max HOM05D006270 ORTHO05D007755 7.4e-74 281.6 276 55.4
QL09p054318 Quercus lobata HOM05D006270 ORTHO05D007755 9.6e-74 281.2 234 65.0
FAN10G3159 Fragaria x ananassa HOM05D006270 ORTHO05D007755 3.7e-73 279.3 240 64.6
Lsat_1_v5_gn_0_7900 Lactuca sativa HOM05D006270 ORTHO05D007755 1.4e-72 277.3 231 61.5
HanXRQChr05g0147941 Helianthus annuus HOM05D006270 ORTHO05D007755 3.1e-72 276.2 246 57.3
Phvul.011G002300 Phaseolus vulgaris HOM05D006270 ORTHO05D007755 6.9e-72 275.0 213 65.7
Gohir.D08G172100 Gossypium hirsutum HOM05D006270 ORTHO05D007755 9.0e-72 274.6 223 63.7
Ciclev10021647m.g Citrus clementina HOM05D006270 ORTHO05D007755 1.2e-71 274.2 273 55.7
FAN10G0687 Fragaria x ananassa HOM05D006270 ORTHO05D007755 1.2e-71 274.2 245 62.0
ECA232G4580 Erigeron canadensis HOM05D006270 ORTHO05D007755 1.5e-71 273.9 212 65.1
Gorai.004G179400 Gossypium raimondii HOM05D006270 ORTHO05D007755 1.5e-71 273.9 223 63.2
RcHm_v2.0_Chr1g0380911 Rosa chinensis HOM05D006270 ORTHO05D007755 1.5e-71 273.9 211 67.8
arahy.Tifrunner.gnm1.ann1.WW5SAZ Arachis hypogaea HOM05D006270 ORTHO05D007755 2.0e-71 273.5 274 55.8
arahy.Tifrunner.gnm1.ann1.3FR1H5 Arachis hypogaea HOM05D006270 ORTHO05D007755 4.5e-71 272.3 275 55.3
Gohir.A08G151000 Gossypium hirsutum HOM05D006270 ORTHO05D007755 4.5e-71 272.3 198 67.2
Cc10_g11640 Coffea canephora HOM05D006270 ORTHO05D007755 7.6e-71 271.6 253 60.9
Migut.C01268 Erythranthe guttata HOM05D006270 ORTHO05D007755 1.3e-70 270.8 250 59.2
Aqoxy6G00085 Aquilegia oxysepala HOM05D006270 ORTHO05D007755 2.2e-70 270.0 210 66.2
Duzib205G0009 Durio zibethinus HOM05D006270 ORTHO05D007755 2.2e-70 270.0 260 57.7
Glyma.12G002000 Glycine max HOM05D006270 ORTHO05D007755 2.2e-70 270.0 243 58.8
MSTRG.25449 Avicennia marina HOM05D006270 ORTHO05D007755 4.9e-70 268.9 267 54.7
FAN01G1506 Fragaria x ananassa HOM05D006270 ORTHO05D007755 4.9e-70 268.9 245 61.2
FAN03G2743 Fragaria x ananassa HOM05D006270 ORTHO05D007755 8.4e-70 268.1 245 61.2
FAN06G0691 Fragaria x ananassa HOM05D006270 ORTHO05D007755 8.4e-70 268.1 245 60.8
FAN06G0861 Fragaria x ananassa HOM05D006270 ORTHO05D007755 1.9e-69 266.9 245 60.4
Sc23g0001640 Simmondsia chinensis HOM05D006270 ORTHO05D007755 1.9e-69 266.9 213 66.7
PGSC0003DMG400014297 Solanum tuberosum HOM05D006270 ORTHO05D007755 1.9e-69 266.9 239 60.3
VMungo1127G1589 Vigna mungo HOM05D006270 ORTHO05D007755 2.5e-69 266.5 247 57.9
Atru.chr13.2329 Acer truncatum HOM05D006270 ORTHO05D007755 7.1e-69 265.0 198 66.2
Nitab4.5_0000167g0160 Nicotiana tabacum HOM05D006270 ORTHO05D007755 9.3e-69 264.6 240 60.0
TWI59G0231 Tripterygium wilfordii HOM05D006270 ORTHO05D007755 1.6e-68 263.8 269 55.4
Manes.08G135800 Manihot esculenta HOM05D006270 ORTHO05D007755 2.1e-68 263.5 234 61.1
SGA_v2.0_scaffold24G10562 Striga asiatica HOM05D006270 ORTHO05D007755 2.1e-68 263.5 280 51.1
Haze_18335 Corylus avellana HOM05D006270 ORTHO05D007755 2.7e-68 263.1 205 66.8
Cfa017859 Carpinus fangiana HOM05D006270 ORTHO05D007755 4.6e-68 262.3 203 67.0
PSO782G5577 Papaver somniferum HOM05D006270 ORTHO05D007755 6.0e-68 261.9 209 65.6
Sopen03g004530 Solanum pennellii HOM05D006270 ORTHO05D007755 6.0e-68 261.9 239 59.0
Potri.005G054600 Populus trichocarpa HOM05D006270 ORTHO05D007755 1.0e-67 261.2 249 55.8
Oeu032990.1 Olea europaea HOM05D006270 ORTHO05D007755 2.3e-67 260.0 201 66.2
Sabra05G0047500 Salix brachista HOM05D006270 ORTHO05D007755 5.1e-67 258.8 261 55.6
DCAR_028408 Daucus carota HOM05D006270 ORTHO05D007755 8.7e-67 258.1 237 59.5
Eucgr.F02983 Eucalyptus grandis HOM05D006270 ORTHO05D007755 8.7e-67 258.1 243 59.7
Nitab4.5_0001579g0030 Nicotiana tabacum HOM05D006270 ORTHO05D007755 8.7e-67 258.1 234 57.7
Solyc03g025710.3 Solanum lycopersicum HOM05D006270 ORTHO05D007755 1.9e-66 256.9 239 58.2
Psat7g147160 Pisum sativum HOM05D006270 ORTHO05D007755 2.5e-66 256.5 259 54.4
ATR1136G034 Amborella trichopoda HOM05D006270 ORTHO05D007755 4.3e-66 255.8 193 66.3
PSO170G6113 Papaver somniferum HOM05D006270 ORTHO05D007755 9.6e-66 254.6 209 64.6
SalBow7G0089 Salvia bowleyana HOM05D006270 ORTHO05D007755 2.1e-65 253.4 197 63.5
CAN.G307.5 Capsicum annuum HOM05D006270 ORTHO05D007755 4.8e-65 252.3 291 49.8
AUR62023526 Chenopodium quinoa HOM05D006270 ORTHO05D007755 5.3e-64 248.8 254 56.3
CANSAT21G0664 Cannabis sativa HOM05D006270 ORTHO05D007755 9.0e-64 248.1 246 55.7
TPR.G27896 Trifolium pratense HOM05D006270 ORTHO05D007755 9.0e-64 248.1 260 52.7
Cpa.g.sc66.22 Carica papaya HOM05D006270 ORTHO05D007755 1.7e-62 243.8 260 52.7
Lalb_Chr01g0000131 Lupinus albus HOM05D006270 ORTHO05D007755 3.8e-62 242.7 265 53.2
EL10Ac1g00156 Beta vulgaris HOM05D006270 ORTHO05D007755 4.9e-62 242.3 250 54.4
PGR102G0747 Punica granatum HOM05D006270 ORTHO05D007755 8.4e-62 241.5 198 65.7
Peaxi162Scf01013g00026 Petunia axillaris HOM05D006270 ORTHO05D007755 3.5e-60 236.1 210 56.7
C06p35210 Brassica napus HOM05D006270 ORTHO05D007755 3.0e-59 233.0 201 58.2
BcaC08g45741 Brassica carinata HOM05D006270 ORTHO05D007755 8.7e-59 231.5 201 58.2
BolC6t38627H Brassica oleracea HOM05D006270 ORTHO05D007755 8.7e-59 231.5 201 58.2
A07p30450 Brassica napus HOM05D006270 ORTHO05D007755 1.5e-58 230.7 201 58.2
BraA07t30681Z Brassica rapa HOM05D006270 ORTHO05D007755 1.9e-58 230.3 201 58.2
Aa31LG4G10780 Aethionema arabicum HOM05D006270 ORTHO05D007755 2.5e-58 229.9 239 53.1
BcaB03g15641 Brassica carinata HOM05D006270 ORTHO05D007755 2.5e-58 229.9 201 58.2
Thhalv10019029m.g Eutrema salsugineum HOM05D006270 ORTHO05D007755 7.4e-58 228.4 199 57.8
THA.LOC104809733 Tarenaya hassleriana HOM05D006270 ORTHO05D007755 1.6e-57 227.3 218 55.0
CiPaw.16G073500 Carya illinoinensis HOM05D006270 ORTHO05D007755 2.8e-57 226.5 233 55.4
Sp5g27100 Schrenkiella parvula HOM05D006270 ORTHO05D007755 2.8e-57 226.5 199 57.3
SEGI_40158 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 2.8e-57 226.5 206 56.8
CARHR064850 Cardamine hirsuta HOM05D006270 ORTHO05D007755 6.3e-57 225.3 247 49.8
COL.COLO4_16875 Corchorus olitorius HOM05D006270 ORTHO05D007755 1.8e-56 223.8 163 67.5
Nitab4.5_0000167g0150 Nicotiana tabacum HOM05D006270 ORTHO05D007755 2.4e-56 223.4 240 53.3
ClCG09G010100 Citrullus lanatus HOM05D006270 ORTHO05D007755 3.1e-56 223.0 271 46.9
Nn5g27482 Nelumbo nucifera HOM05D006270 ORTHO05D007755 4.1e-56 222.6 275 47.6
AT1G72030 Arabidopsis thaliana HOM05D006270 ORTHO05D007755 5.3e-56 222.2 199 57.3
Nitab4.5_0001579g0080 Nicotiana tabacum HOM05D006270 ORTHO05D007755 5.3e-56 222.2 254 50.8
HPP92_002765 Vanilla planifolia HOM05D006270 ORTHO05D007755 9.0e-56 221.5 196 60.2
AL2G31660 Arabidopsis lyrata HOM05D006270 ORTHO05D007755 2.0e-55 220.3 237 50.6
Carub.0002s1881 Capsella rubella HOM05D006270 ORTHO05D007755 7.7e-55 218.4 235 51.5
unitig_8.g2905 Utricularia gibba HOM05D006270 ORTHO05D007755 1.3e-54 217.6 199 58.8
CsaV3_7G024750 Cucumis sativus L. HOM05D006270 ORTHO05D007755 1.1e-53 214.5 198 54.5
Sed0023542 Sechium edule HOM05D006270 ORTHO05D007755 2.5e-53 213.4 214 51.9
Os07g0264800 Oryza sativa ssp. japonica HOM05D006270 ORTHO05D007755 4.6e-52 209.1 216 53.7
Sopen11g010160 Solanum pennellii HOM05D006270 ORTHO05D007755 2.2e-49 200.3 191 51.8
PGSC0003DMG400034528 Solanum tuberosum HOM05D006270 ORTHO05D007755 2.2e-49 200.3 196 52.6
PGSC0003DMG400007305 Solanum tuberosum HOM05D006270 ORTHO05D007755 3.7e-49 199.5 236 50.0
Pp3c3_19510 Physcomitrium patens HOM05D006270 ORTHO05D007755 1.1e-48 198.0 208 51.0
CAN.G1280.16 Capsicum annuum HOM05D006270 ORTHO05D007755 7.7e-47 191.8 202 52.0
Lj7A621T38 Lonicera japonica HOM05D006270 ORTHO05D007755 1.3e-46 191.0 154 64.9
Ca_19683_v3 Cicer arietinum L. HOM05D006270 ORTHO05D007755 2.2e-46 190.3 152 63.2
SMO352G0005 Selaginella moellendorffii HOM05D006270 ORTHO05D007755 2.9e-46 189.9 203 49.8
CSS0031567 Camellia sinensis var. sinensis HOM05D006270 ORTHO05D007755 6.7e-43 178.7 236 51.7
AUR62004580 Chenopodium quinoa HOM05D006270 ORTHO05D007755 2.2e-38 163.7 107 74.8
Prupe.2G311100 Prunus persica HOM05D006270 ORTHO05D007755 1.5e-37 161.0 142 63.4
MBI06_g06704_MAGBIO Magnolia biondii HOM05D006270 ORTHO05D007755 3.2e-37 159.8 153 56.2
SEGI_10565 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 5.7e-34 149.1 129 57.4
Mapoly0148s0033 Marchantia polymorpha HOM05D006270 ORTHO05D007755 1.3e-33 147.9 213 42.3
FvH4_7g31720 Fragaria vesca HOM05D006270 ORTHO05D007755 1.7e-33 147.5 176 52.8
CDE04G3476 Ceratophyllum demersum HOM05D006270 ORTHO05D007755 4.8e-33 146.0 176 48.3
SEGI_32338 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 1.4e-32 144.4 116 62.1
Zm00001eb304740 Zea mays HOM05D006270 ORTHO05D007755 9.4e-29 131.7 149 53.7
Solyc11g020000.1 Solanum lycopersicum HOM05D006270 ORTHO05D007755 5.7e-26 122.5 191 37.2
MELO3C024085.2 Cucumis melo HOM05D006270 ORTHO05D007755 7.5e-26 122.1 167 44.9
Ah.05g178770 Amaranthus hybridus HOM05D006270 ORTHO05D007755 4.8e-25 119.4 179 45.3
SEGI_00952 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 8.3e-25 118.6 111 54.1
AagrBONN_evm.TU.Sc2ySwM_228.4762 Anthoceros agrestis HOM05D006270 ORTHO05D007755 2.4e-24 117.1 146 49.3
GSVIVG01026021001 Vitis vinifera HOM05D000026 ORTHO05D001436 9.1e-24 115.2 112 60.7
Nitab4.5_0000329g0020 Nicotiana tabacum HOM05D006270 ORTHO05D007755 9.4e-21 105.1 126 48.4
SEGI_26224 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 9.4e-21 105.1 96 57.3
Cre06.g269100 Chlamydomonas reinhardtii HOM05D006270 ORTHO05D007755 5.2e-19 99.4 213 31.9
CBR_g50390 Chara braunii HOM05D000019 ORTHO05D000002 8.3e-17 92.0 107 42.1
MD01G1220200 Malus domestica HOM05D006270 ORTHO05D007755 4.1e-16 89.7 95 56.8
GSVIVG01026018001 Vitis vinifera HOM05D006270 ORTHO05D007755 7.5e-10 68.9 44 75.0
SEGI_09763 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 9.2e-08 62.0 64 51.6
SEGI_10524 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 3.5e-07 60.1 66 47.0
MCO16G519 Micromonas commoda HOM05D006270 ORTHO05D007755 6.6e-06 55.8 85 35.3


User provided reference genes

Program Settings