Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_90.g27503 Utricularia gibba HOM05D000642 ORTHO05D424739 7.4e-96 354.0 194 100.0
MSTRG.12662 Avicennia marina HOM05D000642 ORTHO05D000483 6.0e-13 78.6 334 27.2
SGA_v2.0_scaffold104G30145 Striga asiatica HOM05D000642 ORTHO05D000483 2.3e-12 76.6 326 27.6
Migut.N00896 Erythranthe guttata HOM05D000642 ORTHO05D000483 1.5e-11 73.9 336 27.4
SalBow2G1826 Salvia bowleyana HOM05D000642 ORTHO05D000483 1.5e-11 73.9 338 26.9
Actinidia25128 Actinidia chinensis HOM05D000642 ORTHO05D000483 1.3e-10 70.9 298 27.2
Actinidia08564 Actinidia chinensis HOM05D000642 ORTHO05D000483 4.8e-10 68.9 315 26.7
Nitab4.5_0001607g0010 Nicotiana tabacum HOM05D000642 ORTHO05D000483 6.2e-10 68.6 326 24.8
Nitab4.5_0004381g0020 Nicotiana tabacum HOM05D000642 ORTHO05D000483 6.2e-10 68.6 334 24.6
TWI79G0016 Tripterygium wilfordii HOM05D000642 ORTHO05D000483 1.4e-09 67.4 328 25.3
Sed0025912 Sechium edule HOM05D000642 ORTHO05D000483 3.1e-09 66.2 330 26.1
Dinv14476 Davidia involucrata HOM05D000642 ORTHO05D000483 4.0e-09 65.9 331 26.0
Duzib168G1912 Durio zibethinus HOM05D000642 ORTHO05D000483 4.0e-09 65.9 321 26.8
GSVIVG01024812001 Vitis vinifera HOM05D000642 ORTHO05D000483 1.2e-08 64.3 332 25.3
HanXRQChr01g0011011 Helianthus annuus HOM05D000642 ORTHO05D000483 2.0e-08 63.5 56 58.9
HanXRQChr01g0011021 Helianthus annuus HOM05D000642 ORTHO05D000483 2.0e-08 63.5 56 58.9
Cc01_g13720 Coffea canephora HOM05D000642 ORTHO05D000483 3.4e-08 62.8 66 51.5
Phvul.006G063700 Phaseolus vulgaris HOM05D000642 ORTHO05D000483 3.4e-08 62.8 336 24.7
Solyc02g083110.1 Solanum lycopersicum HOM05D000642 ORTHO05D000483 3.4e-08 62.8 334 24.0
MELO3C025877.2 Cucumis melo HOM05D000642 ORTHO05D000483 4.5e-08 62.4 330 26.4
TWI31G0730 Tripterygium wilfordii HOM05D000642 ORTHO05D000483 4.5e-08 62.4 336 24.1
Ca_14890_v3 Cicer arietinum L. HOM05D000642 ORTHO05D000483 5.8e-08 62.0 331 24.5
Manes.01G165400 Manihot esculenta HOM05D000642 ORTHO05D000483 5.8e-08 62.0 58 58.6
Thecc.09G307500 Theobroma cacao HOM05D000642 ORTHO05D000483 5.8e-08 62.0 329 24.9
Lj6g0000613 Lotus japonicus HOM05D000642 ORTHO05D000483 7.6e-08 61.6 323 25.1
Manes.02G122542 Manihot esculenta HOM05D000642 ORTHO05D000483 7.6e-08 61.6 58 56.9
Sopen02g027870 Solanum pennellii HOM05D000642 ORTHO05D000483 7.6e-08 61.6 334 24.0
ClCG02G019770 Citrullus lanatus HOM05D000642 ORTHO05D000483 9.9e-08 61.2 328 25.0
CsaV3_6G016480 Cucumis sativus L. HOM05D000642 ORTHO05D000483 9.9e-08 61.2 330 26.4
DCAR_018940 Daucus carota HOM05D000642 ORTHO05D000483 9.9e-08 61.2 331 25.4
VMungo0540G1862 Vigna mungo HOM05D000642 ORTHO05D000483 9.9e-08 61.2 335 24.5
CSS0021421 Camellia sinensis var. sinensis HOM05D000642 ORTHO05D000483 1.7e-07 60.5 58 55.2
CSS0046249 Camellia sinensis var. sinensis HOM05D000642 ORTHO05D000483 1.7e-07 60.5 58 55.2
COL.COLO4_19085 Corchorus olitorius HOM05D000642 ORTHO05D000483 1.7e-07 60.5 55 60.0
Hma1.2p1_0274F.1_g110240 Hydrangea macrophylla HOM05D000642 ORTHO05D000483 1.7e-07 60.5 337 24.6
Psat5g162600 Pisum sativum HOM05D000642 ORTHO05D000483 1.7e-07 60.5 335 23.9
Sabra09G0028800 Salix brachista HOM05D000642 ORTHO05D000483 1.7e-07 60.5 338 24.0
Aqoxy1G00730 Aquilegia oxysepala HOM05D000642 ORTHO05D000483 2.2e-07 60.1 329 24.3
PGSC0003DMG400001576 Solanum tuberosum HOM05D000642 ORTHO05D000483 2.2e-07 60.1 64 46.9
arahy.Tifrunner.gnm1.ann1.ADH1UX Arachis hypogaea HOM05D000642 ORTHO05D000483 2.9e-07 59.7 329 23.7
AUR62001705 Chenopodium quinoa HOM05D000642 ORTHO05D000483 2.9e-07 59.7 60 55.0
PGR119G0859 Punica granatum HOM05D000642 ORTHO05D000483 2.9e-07 59.7 319 24.8
TAR623G0160 Trochodendron aralioides HOM05D000642 ORTHO05D000483 2.9e-07 59.7 329 24.3
CANSAT54G1978 Cannabis sativa HOM05D000642 ORTHO05D000483 3.8e-07 59.3 330 23.9
Eucgr.B02281 Eucalyptus grandis HOM05D000642 ORTHO05D000483 3.8e-07 59.3 58 53.4
Duzib170G0858 Durio zibethinus HOM05D000642 ORTHO05D000483 4.9e-07 58.9 48 62.5
Gohir.A05G090800 Gossypium hirsutum HOM05D000642 ORTHO05D000483 4.9e-07 58.9 63 54.0
Gohir.D05G091800 Gossypium hirsutum HOM05D000642 ORTHO05D000483 4.9e-07 58.9 63 54.0
Lsat_1_v5_gn_5_171020 Lactuca sativa HOM05D000642 ORTHO05D000483 4.9e-07 58.9 56 57.1
Sed0021470 Sechium edule HOM05D000642 ORTHO05D000483 4.9e-07 58.9 56 57.1
CiPaw.13G083400 Carya illinoinensis HOM05D000642 ORTHO05D000483 6.4e-07 58.5 346 24.3
ECA248G3773 Erigeron canadensis HOM05D000642 ORTHO05D000483 6.4e-07 58.5 56 57.1
Gorai.009G094300 Gossypium raimondii HOM05D000642 ORTHO05D000483 6.4e-07 58.5 63 54.0
Potri.009G041000 Populus trichocarpa HOM05D000642 ORTHO05D000483 6.4e-07 58.5 338 24.3
FvH4_3g37850 Fragaria vesca HOM05D000642 ORTHO05D000483 8.4e-07 58.2 72 48.6
FAN11G0989 Fragaria x ananassa HOM05D000642 ORTHO05D000483 8.4e-07 58.2 72 48.6
Glyma.08G334700 Glycine max HOM05D000642 ORTHO05D000483 8.4e-07 58.2 58 53.4
unitig_0.g316 Utricularia gibba HOM05D000642 ORTHO05D000483 8.4e-07 58.2 54 59.3
Peaxi162Scf00369g00015 Petunia axillaris HOM05D000642 ORTHO05D000483 1.1e-06 57.8 61 57.4
vmacro03002 Vaccinium macrocarpon HOM05D000642 ORTHO05D000483 1.1e-06 57.8 62 53.2
Atru.chr3.4055 Acer truncatum HOM05D000642 ORTHO05D000483 1.9e-06 57.0 56 57.1
QL01p027406 Quercus lobata HOM05D000642 ORTHO05D000483 1.9e-06 57.0 58 55.2
TPR.G30116 Trifolium pratense HOM05D000642 ORTHO05D000483 1.9e-06 57.0 58 51.7
EL10Ac7g16105 Beta vulgaris HOM05D000642 ORTHO05D000483 2.4e-06 56.6 58 51.7
Ciclev10028137m.g Citrus clementina HOM05D000642 ORTHO05D000483 2.4e-06 56.6 56 58.9
Prupe.6G063100 Prunus persica HOM05D000642 ORTHO05D000483 2.4e-06 56.6 60 53.3
QL93p2004_0027 Quercus lobata HOM05D000642 ORTHO05D000483 2.4e-06 56.6 58 55.2
Ah.14g082660 Amaranthus hybridus HOM05D000642 ORTHO05D000483 3.2e-06 56.2 60 51.7
Cpa.g.sc112.79 Carica papaya HOM05D000642 ORTHO05D000483 3.2e-06 56.2 54 53.7
TAR369G0174 Trochodendron aralioides HOM05D000642 ORTHO05D000483 3.2e-06 56.2 326 24.5
arahy.Tifrunner.gnm1.ann1.PIZ2VM Arachis hypogaea HOM05D000642 ORTHO05D000483 4.2e-06 55.8 58 50.0
Lalb_Chr20g0115101 Lupinus albus HOM05D000642 ORTHO05D000483 4.2e-06 55.8 58 51.7
PSO339G2572 Papaver somniferum HOM05D000642 ORTHO05D000483 4.2e-06 55.8 56 51.8
PSO384G2305 Papaver somniferum HOM05D000642 ORTHO05D000483 4.2e-06 55.8 56 51.8
Hund18867 Selenicereus undatus HOM05D000642 ORTHO05D000483 4.2e-06 55.8 60 50.0
Peaxi162Scf00369g00005 Petunia axillaris HOM05D000642 ORTHO05D000483 5.4e-06 55.5 61 55.7
FAN21G3931 Fragaria x ananassa HOM05D000642 ORTHO05D000483 7.1e-06 55.1 72 47.2
Glyma.02G304400 Glycine max HOM05D000642 ORTHO05D000483 7.1e-06 55.1 60 50.0
Glyma.14G009400 Glycine max HOM05D000642 ORTHO05D000483 7.1e-06 55.1 60 51.7
Lsat_1_v5_gn_8_72140 Lactuca sativa HOM05D000642 ORTHO05D000483 7.1e-06 55.1 58 50.0
Nn2g11348 Nelumbo nucifera HOM05D000642 ORTHO05D000483 7.1e-06 55.1 50 56.0
Rhsim13G0074300 Rhododendron simsii HOM05D000642 ORTHO05D000483 7.1e-06 55.1 68 45.6
BcaB08g36303 Brassica carinata HOM05D000642 ORTHO05D000483 9.3e-06 54.7 61 54.1
Lj2C1074T13 Lonicera japonica HOM05D000642 ORTHO05D000483 9.3e-06 54.7 58 53.4
Medtr3g462150 Medicago truncatula HOM05D000642 ORTHO05D000483 9.3e-06 54.7 334 22.8
RcHm_v2.0_Chr5g0068071 Rosa chinensis HOM05D000642 ORTHO05D000483 9.3e-06 54.7 49 59.2


User provided reference genes

Program Settings