Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_8.g3112 Utricularia gibba HOM05D005624 ORTHO05D006896 1.2e-143 513.1 250 100.0
unitig_22.g6367 Utricularia gibba HOM05D005624 ORTHO05D006896 1.3e-97 360.1 228 76.8
SalBow2G1530 Salvia bowleyana HOM05D005624 ORTHO05D006896 4.4e-93 345.1 228 73.7
COL.COLO4_32213 Corchorus olitorius HOM05D005624 ORTHO05D006896 7.6e-93 344.4 227 73.6
Migut.L00899 Erythranthe guttata HOM05D005624 ORTHO05D006896 7.6e-93 344.4 229 73.4
MSTRG.8074 Avicennia marina HOM05D005624 ORTHO05D006896 1.9e-91 339.7 230 72.2
PGR119G0553 Punica granatum HOM05D005624 ORTHO05D006896 9.2e-91 337.4 228 71.1
DCAR_028131 Daucus carota HOM05D005624 ORTHO05D006896 4.6e-90 335.1 228 69.7
THA.LOC104811263 Tarenaya hassleriana HOM05D005624 ORTHO05D006896 4.6e-90 335.1 230 70.9
Oeu032685.1 Olea europaea HOM05D005624 ORTHO05D006896 1.3e-89 333.6 228 71.5
Eucgr.J01702 Eucalyptus grandis HOM05D005624 ORTHO05D006896 3.9e-89 332.0 228 71.5
CiPaw.05G096300 Carya illinoinensis HOM05D005624 ORTHO05D006896 5.1e-89 331.6 228 71.1
Duzib128G1380 Durio zibethinus HOM05D005624 ORTHO05D006896 1.1e-88 330.5 227 70.0
QL03p047013 Quercus lobata HOM05D005624 ORTHO05D006896 1.5e-88 330.1 228 71.1
Prupe.1G209600 Prunus persica HOM05D005624 ORTHO05D006896 5.6e-88 328.2 225 71.6
Actinidia33983 Actinidia chinensis HOM05D005624 ORTHO05D006896 1.6e-87 326.6 227 70.0
BcaB01g05468 Brassica carinata HOM05D005624 ORTHO05D006896 2.8e-87 325.9 229 69.4
CSS0016097 Camellia sinensis var. sinensis HOM05D005624 ORTHO05D006896 3.6e-87 325.5 228 68.4
Gohir.A08G221500 Gossypium hirsutum HOM05D005624 ORTHO05D006896 6.2e-87 324.7 227 69.2
Gohir.D08G238100 Gossypium hirsutum HOM05D005624 ORTHO05D006896 6.2e-87 324.7 227 69.2
Lj3A918T40 Lonicera japonica HOM05D005624 ORTHO05D006896 6.2e-87 324.7 222 70.3
AT5G11680 Arabidopsis thaliana HOM05D005624 ORTHO05D006896 8.1e-87 324.3 233 68.2
Gorai.004G253600 Gossypium raimondii HOM05D005624 ORTHO05D006896 8.1e-87 324.3 227 68.7
GSVIVG01001144001 Vitis vinifera HOM05D005624 ORTHO05D006896 8.1e-87 324.3 222 70.3
AUR62008562 Chenopodium quinoa HOM05D005624 ORTHO05D006896 1.1e-86 323.9 223 70.9
C03p05810 Brassica napus HOM05D000602 ORTHO05D006896 1.4e-86 323.6 229 69.0
BolC3t13101H Brassica oleracea HOM05D005624 ORTHO05D006896 1.4e-86 323.6 229 69.0
Cfa020947 Carpinus fangiana HOM05D005624 ORTHO05D006896 1.8e-86 323.2 228 68.9
Haze_19383 Corylus avellana HOM05D005624 ORTHO05D006896 1.8e-86 323.2 228 68.9
Medtr8g070860 Medicago truncatula HOM05D005624 ORTHO05D006896 2.4e-86 322.8 231 68.8
Thecc.05G235200 Theobroma cacao HOM05D005624 ORTHO05D006896 2.4e-86 322.8 227 68.7
CARHR201540 Cardamine hirsuta HOM05D005624 ORTHO05D006896 3.1e-86 322.4 228 68.4
AL6G22400 Arabidopsis lyrata HOM05D005624 ORTHO05D006896 4.0e-86 322.0 233 67.4
MD13G1135700 Malus domestica HOM05D005624 ORTHO05D006896 4.0e-86 322.0 230 68.7
BraA03t09846Z Brassica rapa HOM05D005624 ORTHO05D006896 5.2e-86 321.6 229 68.6
Rhsim12G0090500 Rhododendron simsii HOM05D005624 ORTHO05D006896 8.9e-86 320.9 228 68.9
Glyma.08G266400 Glycine max HOM05D005624 ORTHO05D006896 1.2e-85 320.5 231 66.7
MD16G1131300 Malus domestica HOM05D005624 ORTHO05D006896 2.0e-85 319.7 231 68.8
Sp6g31930 Schrenkiella parvula HOM05D005624 ORTHO05D006896 2.0e-85 319.7 233 66.5
Aa31LG3G15530 Aethionema arabicum HOM05D000602 ORTHO05D001147 2.6e-85 319.3 232 67.2
Aqoxy3G01649 Aquilegia oxysepala HOM05D005624 ORTHO05D006896 2.6e-85 319.3 222 71.2
Thhalv10014678m.g Eutrema salsugineum HOM05D005624 ORTHO05D006896 3.4e-85 318.9 235 67.2
AUR62033199 Chenopodium quinoa HOM05D005624 ORTHO05D006896 4.4e-85 318.5 223 69.5
BolC2t06481H Brassica oleracea HOM05D005624 ORTHO05D006896 5.8e-85 318.2 232 66.8
Ciclev10005917m.g Citrus clementina HOM05D005624 ORTHO05D006896 5.8e-85 318.2 228 68.0
Cc11_g14800 Coffea canephora HOM05D005624 ORTHO05D006896 5.8e-85 318.2 230 68.7
VMungo0251G1277 Vigna mungo HOM05D005624 ORTHO05D006896 7.6e-85 317.8 231 67.1
Ah.03g134040 Amaranthus hybridus HOM05D005624 ORTHO05D006896 9.9e-85 317.4 223 69.1
Lj4g0021292 Lotus japonicus HOM05D005624 ORTHO05D006896 9.9e-85 317.4 233 67.8
TWI75G1298 Tripterygium wilfordii HOM05D005624 ORTHO05D006896 9.9e-85 317.4 230 68.3
BcaC03g13386 Brassica carinata HOM05D005624 ORTHO05D006896 1.7e-84 316.6 233 67.0
Carub.0006s1018 Capsella rubella HOM05D005624 ORTHO05D006896 3.8e-84 315.5 233 66.5
TPR.G6115 Trifolium pratense HOM05D005624 ORTHO05D006896 3.8e-84 315.5 235 67.2
CANSAT25G1757 Cannabis sativa HOM05D005624 ORTHO05D006896 4.9e-84 315.1 232 67.7
Glyma.16G101200 Glycine max HOM05D005624 ORTHO05D006896 6.4e-84 314.7 231 65.4
FvH4_4g21930 Fragaria vesca HOM05D005624 ORTHO05D006896 8.4e-84 314.3 231 67.5
RcHm_v2.0_Chr4g0428141 Rosa chinensis HOM05D005624 ORTHO05D006896 1.4e-83 313.5 223 69.5
TWI18G0768 Tripterygium wilfordii HOM05D005624 ORTHO05D006896 1.9e-83 313.2 231 66.2
HPP92_013550 Vanilla planifolia HOM05D005624 ORTHO05D006896 1.9e-83 313.2 222 68.5
Atru.chr12.1491 Acer truncatum HOM05D005624 ORTHO05D006896 2.4e-83 312.8 228 67.1
FAN17G0486 Fragaria x ananassa HOM05D005624 ORTHO05D006896 2.4e-83 312.8 231 67.1
CiPaw.06G112400 Carya illinoinensis HOM05D005624 ORTHO05D006896 3.2e-83 312.4 236 66.1
PSO478G3843 Papaver somniferum HOM05D005624 ORTHO05D006896 4.2e-83 312.0 233 67.4
HanXRQChr10g0312121 Helianthus annuus HOM05D005624 ORTHO05D006896 7.1e-83 311.2 222 67.6
Manes.08G097600 Manihot esculenta HOM05D005624 ORTHO05D006896 7.1e-83 311.2 227 66.5
ClCG10G013180 Citrullus lanatus HOM05D005624 ORTHO05D006896 1.2e-82 310.5 228 67.1
TAR622G0071 Trochodendron aralioides HOM05D005624 ORTHO05D006896 1.2e-82 310.5 230 67.4
Peaxi162Scf00334g00119 Petunia axillaris HOM05D005624 ORTHO05D006896 2.1e-82 309.7 228 68.4
CAN.G39.18 Capsicum annuum HOM05D005624 ORTHO05D006896 2.7e-82 309.3 223 69.1
Hma1.2p1_0562F.1_g179050 Hydrangea macrophylla HOM05D005624 ORTHO05D006896 2.7e-82 309.3 233 66.1
Sc17g0003450 Simmondsia chinensis HOM05D005624 ORTHO05D006896 2.7e-82 309.3 229 67.7
Psat4g111480 Pisum sativum HOM05D005624 ORTHO05D006896 3.5e-82 308.9 222 67.1
Phvul.003G274200 Phaseolus vulgaris HOM05D005624 ORTHO05D006896 4.6e-82 308.5 234 64.5
Lsat_1_v5_gn_1_78160 Lactuca sativa HOM05D005624 ORTHO05D006896 7.8e-82 307.8 223 67.7
Sopen02g002020 Solanum pennellii HOM05D005624 ORTHO05D006896 1.0e-81 307.4 223 68.6
Nitab4.5_0011777g0020 Nicotiana tabacum HOM05D005624 ORTHO05D006896 1.3e-81 307.0 231 66.7
PGSC0003DMG400029983 Solanum tuberosum HOM05D005624 ORTHO05D006896 1.3e-81 307.0 223 68.2
PSO017G6046 Papaver somniferum HOM05D005624 ORTHO05D006896 1.7e-81 306.6 233 66.5
EL10Ac7g17520 Beta vulgaris HOM05D005624 ORTHO05D006896 3.0e-81 305.8 223 66.4
Nitab4.5_0001089g0030 Nicotiana tabacum HOM05D005624 ORTHO05D006896 5.1e-81 305.1 223 68.6
Hund05398 Selenicereus undatus HOM05D005624 ORTHO05D006896 5.1e-81 305.1 229 65.1
ATR0582G264 Amborella trichopoda HOM05D005624 ORTHO05D006896 1.1e-80 303.9 232 64.7
CsaV3_3G043430 Cucumis sativus L. HOM05D005624 ORTHO05D006896 1.9e-80 303.1 228 66.2
Solyc02g005603.1 Solanum lycopersicum HOM05D005624 ORTHO05D006896 3.3e-80 302.4 223 68.2
ECA236G4393 Erigeron canadensis HOM05D000127 ORTHO05D000243 5.6e-80 301.6 219 67.6
Sabra01G0051200 Salix brachista HOM05D005624 ORTHO05D006896 7.3e-80 301.2 227 65.6
Sed0005404 Sechium edule HOM05D005624 ORTHO05D006896 7.3e-80 301.2 228 64.9
Potri.003G158200 Populus trichocarpa HOM05D005624 ORTHO05D006896 2.1e-79 299.7 227 64.8
Zm00001eb318180 Zea mays HOM05D005624 ORTHO05D006896 2.8e-79 299.3 231 65.8
Sed0018373 Sechium edule HOM05D005624 ORTHO05D006896 3.6e-79 298.9 228 64.5
Peaxi162Scf00681g00118 Petunia axillaris HOM05D005624 ORTHO05D006896 8.1e-79 297.7 223 66.8
Zm00001eb102600 Zea mays HOM05D005624 ORTHO05D006896 8.1e-79 297.7 231 64.1
Potri.001G072600 Populus trichocarpa HOM05D005624 ORTHO05D006896 4.0e-78 295.4 227 64.3
arahy.Tifrunner.gnm1.ann1.CA7SJ1 Arachis hypogaea HOM05D005624 ORTHO05D006896 1.2e-77 293.9 224 65.2
arahy.Tifrunner.gnm1.ann1.YB0CZG Arachis hypogaea HOM05D005624 ORTHO05D006896 1.2e-77 293.9 224 65.2
A03p05080 Brassica napus HOM05D000602 ORTHO05D006896 4.2e-75 285.4 178 75.3
PGSC0003DMG402032565 Solanum tuberosum HOM05D005624 ORTHO05D006896 1.6e-74 283.5 223 65.0
Solyc04g009190.3 Solanum lycopersicum HOM05D005624 ORTHO05D006896 2.1e-74 283.1 223 64.6
Sopen04g004320 Solanum pennellii HOM05D005624 ORTHO05D006896 4.6e-74 282.0 223 64.1
MELO3C026760.2 Cucumis melo HOM05D005624 ORTHO05D006896 6.2e-71 271.6 171 74.9
Duzib177G0503 Durio zibethinus HOM05D005624 ORTHO05D006896 5.8e-69 265.0 227 60.4
Lsat_1_v5_gn_5_173840 Lactuca sativa HOM05D005624 ORTHO05D006896 9.3e-67 257.7 224 58.0
HanXRQChr01g0012261 Helianthus annuus HOM05D005624 ORTHO05D006896 2.1e-66 256.5 223 56.5
vmacro16032 Vaccinium macrocarpon HOM05D005624 ORTHO05D006896 1.1e-64 250.8 398 39.4
Peaxi162Scf00021g02113 Petunia axillaris HOM05D005624 ORTHO05D006896 4.0e-62 242.3 230 53.9
Zm00001eb071390 Zea mays HOM05D005624 ORTHO05D006896 2.6e-61 239.6 192 64.1
SMO164G0111 Selaginella moellendorffii HOM05D005624 ORTHO05D006896 7.6e-61 238.0 224 50.0
Mapoly0097s0090 Marchantia polymorpha HOM05D005624 ORTHO05D006896 2.5e-59 233.0 227 51.1
Pp3c7_9270 Physcomitrium patens HOM05D005624 ORTHO05D006896 4.2e-59 232.3 226 52.2
Nitab4.5_0000069g0230 Nicotiana tabacum HOM05D005624 ORTHO05D006896 1.6e-55 220.3 228 53.1
Dinv02966 Davidia involucrata HOM05D005624 ORTHO05D006896 1.4e-54 217.2 172 64.0
MBI11_g04265_MAGBIO Magnolia biondii HOM05D005624 ORTHO05D006896 1.8e-54 216.9 186 58.1
Nitab4.5_0004301g0080 Nicotiana tabacum HOM05D005624 ORTHO05D006896 3.1e-54 216.1 228 52.2
AagrBONN_evm.TU.Sc2ySwM_117.3158 Anthoceros agrestis HOM05D005624 ORTHO05D006896 7.6e-53 211.5 230 47.4
Solyc01g008220.3 Solanum lycopersicum HOM05D005624 ORTHO05D006896 4.2e-51 205.7 221 51.1
Lalb_Chr05g0228971 Lupinus albus HOM05D005624 ORTHO05D006896 3.9e-49 199.1 124 71.0
CAN.G619.7 Capsicum annuum HOM05D005624 ORTHO05D006896 5.1e-49 198.7 168 61.9
MBI07_g41258_MAGBIO Magnolia biondii HOM05D005624 ORTHO05D006896 6.7e-49 198.4 156 65.4
Zm00001eb052330 Zea mays HOM05D005624 ORTHO05D006896 2.4e-46 189.9 122 76.2
Zm00001eb036000 Zea mays HOM05D005624 ORTHO05D006896 3.1e-46 189.5 122 76.2
Migut.L00595 Erythranthe guttata HOM05D005624 ORTHO05D006896 2.9e-44 183.0 97 84.5
Gorai.013G198700 Gossypium raimondii HOM05D005624 ORTHO05D006896 6.1e-42 175.3 171 56.7
Gohir.A13G159151 Gossypium hirsutum HOM05D005624 ORTHO05D006896 2.3e-41 173.3 171 56.1
PGSC0003DMG400016363 Solanum tuberosum HOM05D005624 ORTHO05D006896 3.2e-35 152.9 192 46.9
CBR_g24147 Chara braunii HOM05D005624 ORTHO05D006896 3.1e-30 136.3 188 41.5
C02p05330 Brassica napus HOM05D005624 ORTHO05D006896 3.8e-28 129.4 126 57.1
Cre03.g189100 Chlamydomonas reinhardtii HOM05D005624 ORTHO05D006896 2.7e-26 123.2 198 40.4
CAN.G282.51 Capsicum annuum HOM05D005624 ORTHO05D006896 2.6e-24 116.7 219 38.8
CSS0031660 Camellia sinensis var. sinensis HOM05D005624 ORTHO05D006896 1.7e-23 114.0 87 63.2
Cc10_g16310 Coffea canephora HOM05D005624 ORTHO05D006896 6.3e-23 112.1 75 68.0
Cc08_g00010 Coffea canephora HOM05D005624 ORTHO05D006896 3.1e-22 109.8 75 64.0
Cc06_g22650 Coffea canephora HOM05D005624 ORTHO05D006896 1.1e-19 101.3 75 64.0
SEGI_14660 Sequoiadendron giganteum HOM05D005624 ORTHO05D006896 2.5e-19 100.1 60 71.7
Dinv02968 Davidia involucrata HOM05D005624 ORTHO05D006896 1.6e-13 80.9 54 74.1
Lsat_1_v5_gn_4_78441 Lactuca sativa HOM05D005624 ORTHO05D006896 2.6e-08 63.5 41 68.3
Os09g0512900 Oryza sativa ssp. japonica HOM05D005624 ORTHO05D006896 4.4e-08 62.8 36 80.6


User provided reference genes

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