Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_748.g8002 Utricularia gibba HOM05D005286 ORTHO05D006348 9.9e-112 406.8 200 100.0
MSTRG.23499 Avicennia marina HOM05D005286 ORTHO05D006348 1.8e-76 289.7 191 74.9
SGA_v2.0_scaffold189G40378 Striga asiatica HOM05D005286 ORTHO05D006348 8.8e-76 287.3 200 71.5
Hma1.2p1_0310F.1_g121020 Hydrangea macrophylla HOM05D005286 ORTHO05D006348 2.8e-74 282.3 196 70.9
Oeu037874.1 Olea europaea HOM05D005286 ORTHO05D006348 1.4e-73 280.0 174 75.9
Hma1.2p1_3117F.1_g332810 Hydrangea macrophylla HOM05D005286 ORTHO05D006348 1.8e-73 279.6 175 75.4
CiPaw.03G118000 Carya illinoinensis HOM05D005286 ORTHO05D006348 3.1e-73 278.9 201 67.7
Ciclev10000962m.g Citrus clementina HOM05D005286 ORTHO05D006348 9.1e-73 277.3 193 71.0
Migut.H00797 Erythranthe guttata HOM05D005286 ORTHO05D006348 9.1e-73 277.3 201 70.1
Lj1g0003788 Lotus japonicus HOM05D003519 ORTHO05D004443 9.1e-73 277.3 182 72.5
TAR625G0087 Trochodendron aralioides HOM05D005286 ORTHO05D006348 1.2e-72 276.9 201 67.7
PGSC0003DMG400045338 Solanum tuberosum HOM05D005286 ORTHO05D006348 3.4e-72 275.4 201 68.7
GSVIVG01022340001 Vitis vinifera HOM05D005286 ORTHO05D006348 3.4e-72 275.4 187 72.2
CSS0034769 Camellia sinensis var. sinensis HOM05D005286 ORTHO05D006348 4.5e-72 275.0 187 71.1
CSS0004303 Camellia sinensis var. sinensis HOM05D005286 ORTHO05D006348 5.9e-72 274.6 187 71.1
Lj4A421T8 Lonicera japonica HOM05D005286 ORTHO05D006348 7.7e-72 274.2 173 76.3
Atru.chr4.988 Acer truncatum HOM05D005286 ORTHO05D006348 1.0e-71 273.9 195 68.7
Thecc.01G137300 Theobroma cacao HOM05D005286 ORTHO05D006348 1.3e-71 273.5 198 68.2
QL10p041264 Quercus lobata HOM05D005286 ORTHO05D006348 3.8e-71 271.9 173 75.7
Sopen12g030050 Solanum pennellii HOM05D005286 ORTHO05D006348 3.8e-71 271.9 201 67.7
Lalb_Chr23g0272691 Lupinus albus HOM05D005286 ORTHO05D006348 5.0e-71 271.6 173 74.0
Solyc12g088020.1 Solanum lycopersicum HOM05D005286 ORTHO05D006348 8.5e-71 270.8 201 67.2
TPR.G33580 Trifolium pratense HOM05D005286 ORTHO05D006348 8.5e-71 270.8 173 76.3
Actinidia16523 Actinidia chinensis HOM05D005286 ORTHO05D006348 1.1e-70 270.4 173 74.6
QL10p041275 Quercus lobata HOM05D005286 ORTHO05D006348 1.4e-70 270.0 173 76.3
ECA248G0233 Erigeron canadensis HOM05D005286 ORTHO05D006348 1.9e-70 269.6 176 72.7
TWI75G1712 Tripterygium wilfordii HOM05D005286 ORTHO05D006348 1.9e-70 269.6 174 74.7
Cfa021278 Carpinus fangiana HOM05D005286 ORTHO05D006348 3.2e-70 268.9 173 75.1
Ca_16981_v3 Cicer arietinum L. HOM05D005286 ORTHO05D006348 4.2e-70 268.5 173 74.6
MBI06_g35210_MAGBIO Magnolia biondii HOM05D005286 ORTHO05D006348 9.4e-70 267.3 198 66.2
Prupe.4G274700 Prunus persica HOM05D005286 ORTHO05D006348 9.4e-70 267.3 190 68.4
Glyma.06G155750 Glycine max HOM05D005286 ORTHO05D006348 1.2e-69 266.9 173 73.4
PGR119G0364 Punica granatum HOM05D005286 ORTHO05D006348 1.2e-69 266.9 174 73.0
Rhsim08G0000400 Rhododendron simsii HOM05D005286 ORTHO05D006348 1.6e-69 266.5 187 68.4
Duzib187G0999 Durio zibethinus HOM05D005286 ORTHO05D006348 2.1e-69 266.2 201 64.7
Lsat_1_v5_gn_1_78000 Lactuca sativa HOM05D005286 ORTHO05D006348 2.1e-69 266.2 176 71.6
Gohir.D12G083400 Gossypium hirsutum HOM05D005286 ORTHO05D006348 3.6e-69 265.4 201 67.2
Potri.007G101600 Populus trichocarpa HOM05D005286 ORTHO05D006348 3.6e-69 265.4 185 70.3
CAN.G1104.7 Capsicum annuum HOM05D005286 ORTHO05D006348 6.1e-69 264.6 201 64.7
MD15G1135000 Malus domestica HOM05D005286 ORTHO05D006348 6.1e-69 264.6 173 73.4
CSS0028284 Camellia sinensis var. sinensis HOM05D005286 ORTHO05D006348 7.9e-69 264.2 187 69.0
Gorai.008G094500 Gossypium raimondii HOM05D005286 ORTHO05D006348 1.0e-68 263.8 201 67.2
HanXRQChr01g0017141 Helianthus annuus HOM05D005286 ORTHO05D006348 1.0e-68 263.8 175 70.9
Gohir.A12G085400 Gossypium hirsutum HOM05D005286 ORTHO05D006348 2.3e-68 262.7 201 66.2
RcHm_v2.0_Chr2g0122521 Rosa chinensis HOM05D005286 ORTHO05D006348 2.3e-68 262.7 173 71.7
ClCG04G002290 Citrullus lanatus HOM05D005286 ORTHO05D006348 3.0e-68 262.3 201 65.2
FvH4_1g24860 Fragaria vesca HOM05D005286 ORTHO05D006348 3.0e-68 262.3 190 66.8
FAN19G2916 Fragaria x ananassa HOM05D005286 ORTHO05D006348 3.0e-68 262.3 190 66.8
Sabra07G0083900 Salix brachista HOM05D005286 ORTHO05D006348 3.0e-68 262.3 181 70.2
FAN26G1990 Fragaria x ananassa HOM05D005286 ORTHO05D006348 3.9e-68 261.9 190 66.8
Peaxi162Scf00151g00811 Petunia axillaris HOM05D005286 ORTHO05D006348 3.9e-68 261.9 201 64.7
Phvul.009G154600 Phaseolus vulgaris HOM05D005286 ORTHO05D006348 3.9e-68 261.9 173 71.7
Potri.007G101700 Populus trichocarpa HOM05D005286 ORTHO05D006348 3.9e-68 261.9 195 66.2
Medtr3g096675 Medicago truncatula HOM05D005286 ORTHO05D006348 5.2e-68 261.5 173 72.3
THA.LOC104819345 Tarenaya hassleriana HOM05D005286 ORTHO05D006348 5.2e-68 261.5 173 71.7
vmacro18685 Vaccinium macrocarpon HOM05D005286 ORTHO05D006348 6.7e-68 261.2 187 68.4
VMungo1309G1016 Vigna mungo HOM05D005286 ORTHO05D006348 1.1e-67 260.4 173 71.1
Sabra07G0083800 Salix brachista HOM05D005286 ORTHO05D006348 1.5e-67 260.0 182 68.7
FAN23G2334 Fragaria x ananassa HOM05D005286 ORTHO05D006348 2.0e-67 259.6 190 66.3
Aqoxy5G02419 Aquilegia oxysepala HOM05D005286 ORTHO05D006348 3.3e-67 258.8 175 70.9
CANSAT35G0194 Cannabis sativa HOM05D005286 ORTHO05D006348 4.4e-67 258.5 173 71.7
FAN28G1250 Fragaria x ananassa HOM05D005286 ORTHO05D006348 5.7e-67 258.1 190 65.8
Manes.12G159000 Manihot esculenta HOM05D005286 ORTHO05D006348 1.7e-66 256.5 192 66.7
PSO170G0528 Papaver somniferum HOM05D005286 ORTHO05D006348 2.2e-66 256.1 181 66.9
Duzib147G1331 Durio zibethinus HOM05D005286 ORTHO05D006348 3.7e-66 255.4 220 60.5
Sc09g0002230 Simmondsia chinensis HOM05D005286 ORTHO05D006348 3.7e-66 255.4 179 69.3
MELO3C008897.2 Cucumis melo HOM05D005286 ORTHO05D006348 8.2e-66 254.2 201 63.2
arahy.Tifrunner.gnm1.ann1.7K8RK5 Arachis hypogaea HOM05D005286 ORTHO05D006348 1.1e-65 253.8 173 69.9
CSS0025452 Camellia sinensis var. sinensis HOM05D005286 ORTHO05D006348 1.4e-65 253.4 201 63.2
CsaV3_4G030380 Cucumis sativus L. HOM05D005286 ORTHO05D006348 2.4e-65 252.7 180 68.3
Sed0025698 Sechium edule HOM05D005286 ORTHO05D006348 3.1e-65 252.3 205 62.9
arahy.Tifrunner.gnm1.ann1.ZN9YLD Arachis hypogaea HOM05D005286 ORTHO05D006348 4.1e-65 251.9 173 69.4
Ah.06g191030 Amaranthus hybridus HOM05D005286 ORTHO05D006348 7.0e-65 251.1 202 60.4
ATR0138G018 Amborella trichopoda HOM05D005286 ORTHO05D006348 7.0e-65 251.1 176 69.3
AL8G41150 Arabidopsis lyrata HOM05D005286 ORTHO05D006348 7.0e-65 251.1 181 67.4
Aa31LG1G17980 Aethionema arabicum HOM05D005286 ORTHO05D006348 2.0e-64 249.6 179 67.6
Nn5g28436 Nelumbo nucifera HOM05D005286 ORTHO05D006348 2.0e-64 249.6 175 68.0
EL10Ac4g09623 Beta vulgaris HOM05D005286 ORTHO05D006348 2.6e-64 249.2 193 61.7
Cc07_g21020 Coffea canephora HOM05D005286 ORTHO05D006348 2.6e-64 249.2 178 68.0
THA.LOC104818420 Tarenaya hassleriana HOM05D005286 ORTHO05D006348 2.6e-64 249.2 201 61.2
Carub.0008s2471 Capsella rubella HOM05D005286 ORTHO05D006348 4.5e-64 248.4 182 65.9
AT5G63910 Arabidopsis thaliana HOM05D005286 ORTHO05D006348 7.7e-64 247.7 181 66.9
CARHR277830 Cardamine hirsuta HOM05D005286 ORTHO05D006348 1.0e-63 247.3 181 65.7
Nn1g08960 Nelumbo nucifera HOM05D005286 ORTHO05D006348 1.0e-63 247.3 175 65.7
BcaB02g09762 Brassica carinata HOM05D005286 ORTHO05D006348 8.5e-63 244.2 182 64.8
Sp2g26980 Schrenkiella parvula HOM05D005286 ORTHO05D006348 1.5e-62 243.4 181 64.6
HPP92_011629 Vanilla planifolia HOM05D005286 ORTHO05D006348 2.5e-62 242.7 186 64.0
A06p30530 Brassica napus HOM05D005286 ORTHO05D006348 3.2e-62 242.3 179 64.8
C03p62500 Brassica napus HOM05D005286 ORTHO05D006348 3.2e-62 242.3 181 64.6
BolC3t18507H Brassica oleracea HOM05D005286 ORTHO05D006348 3.2e-62 242.3 181 64.6
BraA06t26002Z Brassica rapa HOM05D005286 ORTHO05D006348 3.2e-62 242.3 179 64.8
Hund21799 Selenicereus undatus HOM05D005286 ORTHO05D006348 3.2e-62 242.3 181 62.4
AUR62006858 Chenopodium quinoa HOM05D005286 ORTHO05D006348 5.5e-62 241.5 175 65.7
BcaC01g02644 Brassica carinata HOM05D005286 ORTHO05D006348 9.4e-62 240.7 181 64.1
Zm00001eb434510 Zea mays HOM05D005286 ORTHO05D006348 1.6e-61 240.0 176 64.2
AUR62000514 Chenopodium quinoa HOM05D005286 ORTHO05D006348 2.7e-61 239.2 198 60.1
Nitab4.5_0000954g0020 Nicotiana tabacum HOM05D005286 ORTHO05D006348 6.1e-61 238.0 187 63.1
SEGI_22884 Sequoiadendron giganteum HOM05D005286 ORTHO05D006348 9.7e-59 230.7 174 63.8
SEGI_35897 Sequoiadendron giganteum HOM05D005286 ORTHO05D006348 9.7e-59 230.7 174 63.8
Thhalv10004131m.g Eutrema salsugineum HOM05D005286 ORTHO05D006348 1.7e-55 219.9 161 67.1
Eucgr.I00123 Eucalyptus grandis HOM05D005286 ORTHO05D006348 3.6e-53 212.2 224 54.5
Dinv15529 Davidia involucrata HOM05D005286 ORTHO05D006348 2.4e-49 199.5 131 70.2
Dinv24561 Davidia involucrata HOM05D005286 ORTHO05D006348 2.4e-49 199.5 131 70.2
SMO119G0327 Selaginella moellendorffii HOM05D005286 ORTHO05D006348 2.4e-49 199.5 173 56.6
Cpa.g.sc37.7 Carica papaya HOM05D005286 ORTHO05D006348 5.4e-49 198.4 187 55.1
CDE08G1664 Ceratophyllum demersum HOM05D005286 ORTHO05D006348 9.1e-49 197.6 145 65.5
Mapoly0032s0088 Marchantia polymorpha HOM05D005286 ORTHO05D006348 2.0e-48 196.4 166 56.6
CBR_g8546 Chara braunii HOM05D005286 ORTHO05D006348 5.9e-48 194.9 170 55.9
COL.COLO4_35813 Corchorus olitorius HOM05D005286 ORTHO05D006348 2.8e-45 186.0 124 72.6
Oeu039334.1 Olea europaea HOM05D005286 ORTHO05D006348 1.6e-37 160.2 109 68.8
DCAR_000205 Daucus carota HOM05D005286 ORTHO05D006348 2.1e-37 159.8 114 66.7
Nitab4.5_0000432g0040 Nicotiana tabacum HOM05D005286 ORTHO05D006348 1.8e-33 146.7 187 47.1
Haze_10873 Corylus avellana HOM05D005286 ORTHO05D006348 3.0e-31 139.4 100 70.0
Hund07236 Selenicereus undatus HOM05D005286 ORTHO05D006348 6.6e-31 138.3 114 56.1
Gohir.D12G083401 Gossypium hirsutum HOM05D005286 ORTHO05D006348 1.9e-30 136.7 96 67.7
DCAR_019994 Daucus carota HOM05D005286 ORTHO05D006348 3.4e-27 125.9 192 40.6
Glyma.04G210301 Glycine max HOM05D005286 ORTHO05D006348 5.2e-20 102.1 55 85.5
CBR_g864 Chara braunii HOM05D005286 ORTHO05D006348 3.4e-19 99.4 175 29.7
Psat5g059680 Pisum sativum HOM05D005286 ORTHO05D006348 8.6e-15 84.7 52 71.2
Cre10.g425200 Chlamydomonas reinhardtii HOM05D005286 ORTHO05D006348 2.6e-11 73.2 155 34.8
AagrBONN_evm.TU.Sc2ySwM_362.2029 Anthoceros agrestis HOM05D005286 ORTHO05D006348 5.8e-11 72.0 53 56.6
PRCOL_00003919 Prasinoderma coloniale HOM05D005286 ORTHO05D006348 2.3e-07 60.1 84 38.1
Pp3c3_10560 Physcomitrium patens HOM05D005286 ORTHO05D006348 5.1e-07 58.9 42 59.5


User provided reference genes

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