Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_736.g22596 Utricularia gibba HOM05D006243 ORTHO05D007688 9.2e-145 516.9 269 100.0
SalBow3G2874 Salvia bowleyana HOM05D006243 ORTHO05D007688 3.8e-98 362.1 255 74.9
Solyc11g011170.2 Solanum lycopersicum HOM05D006243 ORTHO05D007688 1.9e-97 359.8 254 73.6
PGSC0003DMG402015686 Solanum tuberosum HOM05D006243 ORTHO05D007688 4.2e-97 358.6 250 75.2
Sopen11g005930 Solanum pennellii HOM05D006243 ORTHO05D007688 7.1e-97 357.8 254 73.2
CSS0038083 Camellia sinensis var. sinensis HOM05D006243 ORTHO05D007688 2.7e-96 355.9 254 74.0
Migut.H02264 Erythranthe guttata HOM05D006243 ORTHO05D007688 1.8e-95 353.2 245 75.9
CAN.G222.23 Capsicum annuum HOM05D006243 ORTHO05D007688 1.5e-94 350.1 254 72.4
Cc07_g13520 Coffea canephora HOM05D006243 ORTHO05D007688 4.3e-94 348.6 251 73.3
Oeu012257.1 Olea europaea HOM05D006243 ORTHO05D007688 4.3e-94 348.6 243 76.5
GSVIVG01030779001 Vitis vinifera HOM05D006243 ORTHO05D007688 2.1e-93 346.3 246 74.8
Potri.017G129100 Populus trichocarpa HOM05D006243 ORTHO05D007688 2.8e-93 345.9 252 71.4
Thecc.04G115200 Theobroma cacao HOM05D006243 ORTHO05D007688 3.6e-93 345.5 246 73.2
Ciclev10011587m.g Citrus clementina HOM05D006243 ORTHO05D007688 1.8e-92 343.2 258 70.9
Peaxi162Scf00305g00613 Petunia axillaris HOM05D006243 ORTHO05D007688 5.3e-92 341.7 254 71.3
Manes.01G117900 Manihot esculenta HOM05D006243 ORTHO05D007688 9.0e-92 340.9 247 72.5
MSTRG.23392 Avicennia marina HOM05D006243 ORTHO05D007688 1.2e-91 340.5 243 74.9
Sabra17G0107600 Salix brachista HOM05D006243 ORTHO05D007688 1.2e-91 340.5 247 72.1
Cpa.g.sc67.47 Carica papaya HOM05D006243 ORTHO05D007688 1.5e-91 340.1 250 71.2
Duzib133G1335 Durio zibethinus HOM05D006243 ORTHO05D007688 1.5e-91 340.1 246 71.5
Oeu032326.2 Olea europaea HOM05D006243 ORTHO05D007688 1.5e-91 340.1 245 75.5
Gohir.A07G078300 Gossypium hirsutum HOM05D006243 ORTHO05D007688 2.6e-91 339.3 254 71.3
Atru.chr1.1900 Acer truncatum HOM05D006243 ORTHO05D007688 3.4e-91 339.0 250 72.0
COL.COLO4_10159 Corchorus olitorius HOM05D006243 ORTHO05D007688 4.5e-91 338.6 243 72.8
Gorai.001G088700 Gossypium raimondii HOM05D006243 ORTHO05D007688 4.5e-91 338.6 254 71.3
Lj4A263G87 Lonicera japonica HOM05D006243 ORTHO05D007688 4.5e-91 338.6 263 69.2
Actinidia06497 Actinidia chinensis HOM05D006243 ORTHO05D007688 7.6e-91 337.8 242 74.0
Hund13108 Selenicereus undatus HOM05D006243 ORTHO05D007688 7.6e-91 337.8 261 68.6
TWI53G0799 Tripterygium wilfordii HOM05D006243 ORTHO05D007688 7.6e-91 337.8 260 71.2
Nn4g24254 Nelumbo nucifera HOM05D006243 ORTHO05D007688 1.3e-90 337.0 240 73.8
Rhsim10G0177000 Rhododendron simsii HOM05D006243 ORTHO05D007688 1.7e-90 336.7 259 70.3
Eucgr.J01597 Eucalyptus grandis HOM05D006243 ORTHO05D007688 3.8e-90 335.5 247 72.1
FvH4_1g28740 Fragaria vesca HOM05D006243 ORTHO05D007688 4.9e-90 335.1 247 73.7
FAN19G0552 Fragaria x ananassa HOM05D006243 ORTHO05D007688 4.9e-90 335.1 247 73.7
FAN28G0309 Fragaria x ananassa HOM05D006243 ORTHO05D007688 6.4e-90 334.7 247 74.1
CANSAT64G2718 Cannabis sativa HOM05D006243 ORTHO05D007688 1.4e-89 333.6 249 71.5
Gohir.D07G083100 Gossypium hirsutum HOM05D006243 ORTHO05D007688 1.4e-89 333.6 254 70.1
Cfa007817 Carpinus fangiana HOM05D006243 ORTHO05D007688 1.9e-89 333.2 261 69.7
Lsat_1_v5_gn_3_64500 Lactuca sativa HOM05D006243 ORTHO05D007688 1.9e-89 333.2 255 69.4
FAN26G0580 Fragaria x ananassa HOM05D006243 ORTHO05D007688 2.4e-89 332.8 247 73.3
CiPaw.03G071500 Carya illinoinensis HOM05D006243 ORTHO05D007688 3.2e-89 332.4 247 72.1
TPR.G8275 Trifolium pratense HOM05D006243 ORTHO05D007688 3.2e-89 332.4 252 70.2
EL10Ac2g03168 Beta vulgaris HOM05D006243 ORTHO05D007688 4.2e-89 332.0 251 68.1
arahy.Tifrunner.gnm1.ann1.Y3W4B5 Arachis hypogaea HOM05D006243 ORTHO05D007688 5.5e-89 331.6 247 71.7
Prupe.3G161300 Prunus persica HOM05D006243 ORTHO05D007688 5.5e-89 331.6 251 70.9
AUR62038703 Chenopodium quinoa HOM05D006243 ORTHO05D007688 7.1e-89 331.3 254 67.7
MD09G1263800 Malus domestica HOM05D006243 ORTHO05D007688 7.1e-89 331.3 248 71.8
Glyma.02G245300 Glycine max HOM05D006243 ORTHO05D007688 1.6e-88 330.1 260 68.5
Sp5g21350 Schrenkiella parvula HOM05D006243 ORTHO05D007688 1.6e-88 330.1 243 72.0
ECA246G3278 Erigeron canadensis HOM05D006243 ORTHO05D007688 2.1e-88 329.7 246 69.9
Haze_14258 Corylus avellana HOM05D006243 ORTHO05D007688 2.7e-88 329.3 261 69.0
Aqoxy3G00051 Aquilegia oxysepala HOM05D006243 ORTHO05D007688 7.9e-88 327.8 248 71.0
HanXRQChr13g0418351 Helianthus annuus HOM05D006243 ORTHO05D007688 7.9e-88 327.8 246 69.9
Sc10g0004760 Simmondsia chinensis HOM05D006243 ORTHO05D007688 7.9e-88 327.8 254 69.7
Aa31LG2G3000 Aethionema arabicum HOM05D006243 ORTHO05D007688 1.0e-87 327.4 243 72.0
vmacro07692 Vaccinium macrocarpon HOM05D006243 ORTHO05D007688 1.0e-87 327.4 244 72.1
BcaB03g15275 Brassica carinata HOM05D006243 ORTHO05D007688 1.8e-87 326.6 241 71.8
TAR629G1693 Trochodendron aralioides HOM05D006243 ORTHO05D007688 1.8e-87 326.6 250 70.0
AUR62018213 Chenopodium quinoa HOM05D006243 ORTHO05D007688 2.3e-87 326.2 254 67.3
THA.LOC104805617 Tarenaya hassleriana HOM05D006243 ORTHO05D007688 2.3e-87 326.2 253 70.0
Medtr5g078290 Medicago truncatula HOM05D006243 ORTHO05D007688 3.9e-87 325.5 246 70.7
Carub.0002s1234 Capsella rubella HOM05D006243 ORTHO05D007688 5.1e-87 325.1 244 70.5
DCAR_014173 Daucus carota HOM05D006243 ORTHO05D007688 5.1e-87 325.1 260 67.7
AT1G66330 Arabidopsis thaliana HOM05D006243 ORTHO05D007688 8.7e-87 324.3 256 68.0
Lalb_Chr10g0104381 Lupinus albus HOM05D006243 ORTHO05D007688 8.7e-87 324.3 247 70.4
RcHm_v2.0_Chr3g0493131 Rosa chinensis HOM05D006243 ORTHO05D007688 1.1e-86 323.9 247 70.9
AL2G24050 Arabidopsis lyrata HOM05D006243 ORTHO05D007688 2.5e-86 322.8 256 68.0
BcaB05g24167 Brassica carinata HOM05D006243 ORTHO05D007688 3.3e-86 322.4 242 70.7
MD17G1259100 Malus domestica HOM05D006243 ORTHO05D007688 3.3e-86 322.4 248 70.2
PSO017G3733 Papaver somniferum HOM05D006243 ORTHO05D007688 4.3e-86 322.0 249 69.9
Phvul.008G235800 Phaseolus vulgaris HOM05D006243 ORTHO05D007688 7.4e-86 321.2 247 69.2
CARHR058210 Cardamine hirsuta HOM05D006243 ORTHO05D007688 9.6e-86 320.9 241 70.1
BraA07t30960Z Brassica rapa HOM05D006243 ORTHO05D007688 1.3e-85 320.5 242 71.1
BraA02t06418Z Brassica rapa HOM05D006243 ORTHO05D007688 2.1e-85 319.7 240 71.2
BcaC08g46068 Brassica carinata HOM05D006243 ORTHO05D007688 3.7e-85 318.9 242 70.7
LjContig00141g0011202 Lotus japonicus HOM05D006243 ORTHO05D007688 6.2e-85 318.2 248 69.4
Os05g0148700 Oryza sativa ssp. japonica HOM05D006243 ORTHO05D007688 6.2e-85 318.2 246 67.9
PSO478G0940 Papaver somniferum HOM05D006243 ORTHO05D007688 6.2e-85 318.2 256 67.2
BcaC03g14742 Brassica carinata HOM05D006243 ORTHO05D007688 1.1e-84 317.4 240 70.8
BolC2t08324H Brassica oleracea HOM05D006243 ORTHO05D007688 1.1e-84 317.4 240 70.8
ClCG05G011500 Citrullus lanatus HOM05D006243 ORTHO05D007688 1.1e-84 317.4 256 66.8
A07p33290 Brassica napus HOM05D006243 ORTHO05D007688 3.1e-84 315.8 243 70.8
C06p39620 Brassica napus HOM05D006243 ORTHO05D007688 9.0e-84 314.3 243 70.4
BolC6t39055H Brassica oleracea HOM05D006243 ORTHO05D007688 9.0e-84 314.3 243 70.4
CsaV3_3G020810 Cucumis sativus L. HOM05D006243 ORTHO05D007688 1.2e-83 313.9 259 64.9
ATR0317G069 Amborella trichopoda HOM05D006243 ORTHO05D007688 1.0e-82 310.8 255 63.1
C02p21930 Brassica napus HOM05D006243 ORTHO05D007688 1.3e-82 310.5 233 71.7
MELO3C020192.2 Cucumis melo HOM05D006243 ORTHO05D007688 2.2e-82 309.7 255 65.9
Zm00001eb165460 Zea mays HOM05D006243 ORTHO05D007688 1.1e-81 307.4 260 63.1
Lalb_Chr17g0346141 Lupinus albus HOM05D006243 ORTHO05D007688 1.9e-81 306.6 242 67.8
A02p13590 Brassica napus HOM05D006243 ORTHO05D007688 3.2e-81 305.8 231 71.4
CDE04G1800 Ceratophyllum demersum HOM05D006243 ORTHO05D007688 2.1e-80 303.1 243 66.3
Nitab4.5_0000201g0240 Nicotiana tabacum HOM05D006243 ORTHO05D007688 5.1e-79 298.5 242 66.9
HPP92_027416 Vanilla planifolia HOM05D006243 ORTHO05D007688 3.3e-78 295.8 258 62.8
SEGI_26344 Sequoiadendron giganteum HOM05D006243 ORTHO05D007688 1.6e-77 293.5 246 63.4
arahy.Tifrunner.gnm1.ann1.SFD8TD Arachis hypogaea HOM05D006243 ORTHO05D007688 1.1e-76 290.8 237 67.5
PGR004G2672 Punica granatum HOM05D006243 ORTHO05D007688 4.6e-72 275.4 209 70.8
SGA_v2.0_scaffold108G30955 Striga asiatica HOM05D006243 ORTHO05D007688 4.6e-72 275.4 239 65.3
Ca_05826_v3 Cicer arietinum L. HOM05D006243 ORTHO05D007688 2.5e-70 269.6 237 64.1
Glyma.14G215400 Glycine max HOM05D006243 ORTHO05D007688 8.2e-69 264.6 216 67.6
Nitab4.5_0009518g0020 Nicotiana tabacum HOM05D006243 ORTHO05D007688 6.5e-66 255.0 242 60.3
Actinidia17213 Actinidia chinensis HOM05D006243 ORTHO05D007688 7.2e-65 251.5 192 71.4
Ah.10g032360 Amaranthus hybridus HOM05D006243 ORTHO05D007688 5.7e-62 241.9 162 74.7
MD17G1258600 Malus domestica HOM05D006243 ORTHO05D007688 6.9e-60 235.0 228 61.4
Thhalv10018612m.g Eutrema salsugineum HOM05D006243 ORTHO05D007688 8.5e-58 228.0 180 68.3
Sed0013436 Sechium edule HOM05D006243 ORTHO05D007688 9.7e-54 214.5 187 62.6
Pp3c16_1710 Physcomitrium patens HOM05D006243 ORTHO05D007688 1.4e-52 210.7 240 49.2
AagrBONN_evm.TU.Sc2ySwM_117.2468 Anthoceros agrestis HOM05D006243 ORTHO05D007688 3.5e-51 206.1 243 44.4
VMungo0647G1521 Vigna mungo HOM05D006243 ORTHO05D007688 3.8e-50 202.6 116 89.7
Pp3c25_7980 Physcomitrium patens HOM05D006243 ORTHO05D007688 4.7e-48 195.7 225 49.3
Pp3c5_8230 Physcomitrium patens HOM05D006243 ORTHO05D007688 2.6e-46 189.9 230 47.4
Mapoly0055s0114 Marchantia polymorpha HOM05D006243 ORTHO05D007688 5.7e-46 188.7 235 44.3
Psat2g047960 Pisum sativum HOM05D006243 ORTHO05D007688 8.3e-37 158.3 154 55.8
SMO238G0021 Selaginella moellendorffii HOM05D006243 ORTHO05D007688 6.5e-34 148.7 248 36.3
Lsat_1_v5_gn_2_20381 Lactuca sativa HOM05D006243 ORTHO05D007688 1.6e-32 144.1 117 66.7
CBR_g27960 Chara braunii HOM05D006243 ORTHO05D007688 2.1e-32 143.7 234 36.8
RcHm_v2.0_Chr7g0216651 Rosa chinensis HOM05D006243 ORTHO05D007688 2.8e-29 133.3 77 89.6
Dinv28209 Davidia involucrata HOM05D006243 ORTHO05D007688 1.2e-22 111.3 82 67.1
VMungo0647G1427 Vigna mungo HOM05D006243 ORTHO05D007688 7.5e-22 108.6 132 46.2
Lsat_1_v5_gn_9_50281 Lactuca sativa HOM05D006243 ORTHO05D007688 1.1e-17 94.7 60 80.0
Lsat_1_v5_gn_9_64341 Lactuca sativa HOM05D000326 ORTHO05D000312 5.0e-10 69.3 101 47.5
QL02p058075 Quercus lobata HOM05D006243 ORTHO05D007688 9.5e-09 65.1 44 70.5
Actinidia17214 Actinidia chinensis HOM05D006243 ORTHO05D007688 3.4e-06 56.6 43 60.5


User provided reference genes

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