Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_699.g19629 Utricularia gibba HOM05D003806 ORTHO05D004346 6.0e-40 167.2 90 100.0
unitig_85.g27313 Utricularia gibba HOM05D003806 ORTHO05D004346 1.2e-21 106.3 84 72.6
FAN05G0560 Fragaria x ananassa HOM05D003806 ORTHO05D004346 4.0e-12 74.7 89 46.1
FAN09G2907 Fragaria x ananassa HOM05D003806 ORTHO05D004346 4.0e-12 74.7 89 46.1
FAN02G2860 Fragaria x ananassa HOM05D003806 ORTHO05D004346 6.9e-12 73.9 89 46.1
FvH4_6g39571 Fragaria vesca HOM05D003806 ORTHO05D004346 9.0e-12 73.6 89 46.1
FAN14G1588 Fragaria x ananassa HOM05D003806 ORTHO05D004346 9.0e-12 73.6 89 46.1
FAN14G4911 Fragaria x ananassa HOM05D003806 ORTHO05D004346 9.0e-12 73.6 89 46.1
MSTRG.6602 Avicennia marina HOM05D003806 ORTHO05D004346 7.6e-11 70.5 89 42.7
Lj3g0015803 Lotus japonicus HOM05D003806 ORTHO05D004346 9.9e-11 70.1 89 43.8
MBI02_g35832_MAGBIO Magnolia biondii HOM05D003806 ORTHO05D004346 1.3e-10 69.7 89 42.7
RcHm_v2.0_Chr2g0153621 Rosa chinensis HOM05D003806 ORTHO05D004346 1.7e-10 69.3 88 44.3
Nn7g38253 Nelumbo nucifera HOM05D003806 ORTHO05D004346 2.9e-10 68.6 89 41.6
Cpa.g.sc8.294 Carica papaya HOM05D003806 ORTHO05D004346 3.8e-10 68.2 89 41.6
PGR031G3264 Punica granatum HOM05D003806 ORTHO05D004346 3.8e-10 68.2 89 39.3
Ciclev10010914m.g Citrus clementina HOM05D003806 ORTHO05D004346 6.4e-10 67.4 88 43.2
Duzib133G0409 Durio zibethinus HOM05D003806 ORTHO05D004346 6.4e-10 67.4 88 43.2
Cfa023525 Carpinus fangiana HOM05D003806 ORTHO05D004346 8.4e-10 67.0 89 42.7
Gohir.A07G081500 Gossypium hirsutum HOM05D003806 ORTHO05D004346 8.4e-10 67.0 89 42.7
CSS0010582 Camellia sinensis var. sinensis HOM05D003806 ORTHO05D004346 1.4e-09 66.2 89 38.2
HanXRQChr17g0541141 Helianthus annuus HOM05D003806 ORTHO05D004346 1.4e-09 66.2 89 37.1
Lsat_1_v5_gn_3_34740 Lactuca sativa HOM05D003806 ORTHO05D004346 1.4e-09 66.2 89 39.3
CiPaw.04G076200 Carya illinoinensis HOM05D003806 ORTHO05D004346 1.9e-09 65.9 88 43.2
Hma1.2p1_0401F.1_g144710 Hydrangea macrophylla HOM05D003806 ORTHO05D004346 1.9e-09 65.9 89 37.1
Sabra06G0014600 Salix brachista HOM05D003806 ORTHO05D004346 1.9e-09 65.9 89 37.1
Actinidia31596 Actinidia chinensis HOM05D003806 ORTHO05D004346 2.4e-09 65.5 89 40.4
arahy.Tifrunner.gnm1.ann1.LI5V6E Arachis hypogaea HOM05D003806 ORTHO05D004346 2.4e-09 65.5 89 37.1
arahy.Tifrunner.gnm1.ann1.TP1CMR Arachis hypogaea HOM05D003806 ORTHO05D004346 2.4e-09 65.5 89 37.1
Cc05_g00050 Coffea canephora HOM05D003806 ORTHO05D004346 2.4e-09 65.5 89 41.6
DCAR_009841 Daucus carota HOM05D003806 ORTHO05D004346 2.4e-09 65.5 89 41.6
Gohir.D07G087100 Gossypium hirsutum HOM05D003806 ORTHO05D004346 2.4e-09 65.5 77 45.5
Gorai.001G093100 Gossypium raimondii HOM05D003806 ORTHO05D004346 2.4e-09 65.5 77 45.5
HanXRQChr06g0171661 Helianthus annuus HOM05D003806 ORTHO05D004346 2.4e-09 65.5 88 39.8
Potri.006G021200 Populus trichocarpa HOM05D003806 ORTHO05D004346 2.4e-09 65.5 89 37.1
Sabra06G0014700 Salix brachista HOM05D003806 ORTHO05D004346 2.4e-09 65.5 89 38.2
Duzib138G1777 Durio zibethinus HOM05D003806 ORTHO05D004346 3.2e-09 65.1 84 44.0
ECA246G1737 Erigeron canadensis HOM05D003806 ORTHO05D004346 4.2e-09 64.7 77 44.2
TAR626G1670 Trochodendron aralioides HOM05D003806 ORTHO05D004346 4.2e-09 64.7 83 42.2
Solyc07g043320.3 Solanum lycopersicum HOM05D003806 ORTHO05D004346 5.4e-09 64.3 82 45.1
Sopen07g022880 Solanum pennellii HOM05D003806 ORTHO05D004346 5.4e-09 64.3 81 45.7
Thecc.01G172500 Theobroma cacao HOM05D003806 ORTHO05D004346 5.4e-09 64.3 84 44.0
Phvul.011G024500 Phaseolus vulgaris HOM05D003806 ORTHO05D004346 7.1e-09 63.9 89 39.3
VMungo1127G1373 Vigna mungo HOM05D003806 ORTHO05D004346 7.1e-09 63.9 89 38.2
Glyma.12G022500 Glycine max HOM05D003806 ORTHO05D004346 9.3e-09 63.5 81 44.4
ClCG07G010910 Citrullus lanatus HOM05D003806 ORTHO05D004346 1.2e-08 63.2 81 43.2
Eucgr.A00904 Eucalyptus grandis HOM05D003806 ORTHO05D004346 1.2e-08 63.2 89 41.6
Haze_13639 Corylus avellana HOM05D003806 ORTHO05D004346 1.6e-08 62.8 82 45.1
Glyma.11G096400 Glycine max HOM05D003806 ORTHO05D004346 2.1e-08 62.4 81 43.2
Sed0016792 Sechium edule HOM05D003806 ORTHO05D004346 2.7e-08 62.0 77 40.3
MELO3C016203.2 Cucumis melo HOM05D003806 ORTHO05D004346 3.5e-08 61.6 81 42.0
MD09G1138500 Malus domestica HOM05D003806 ORTHO05D004346 4.6e-08 61.2 80 45.0
Medtr4g076030 Medicago truncatula HOM05D003806 ORTHO05D004346 6.0e-08 60.8 84 39.3
Psat7g179080 Pisum sativum HOM05D003806 ORTHO05D004346 6.0e-08 60.8 84 40.5
Lalb_Chr01g0001171 Lupinus albus HOM05D003806 ORTHO05D004346 1.3e-07 59.7 77 39.0
Manes.09G072900 Manihot esculenta HOM05D003806 ORTHO05D004346 1.7e-07 59.3 72 44.4
vmacro08755 Vaccinium macrocarpon HOM05D003806 ORTHO05D004346 2.3e-07 58.9 81 39.5
DCAR_013337 Daucus carota HOM05D003806 ORTHO05D004346 3.0e-07 58.5 89 37.1
Dinv08951 Davidia involucrata HOM05D003806 ORTHO05D004346 5.1e-07 57.8 89 38.2
Peaxi162Scf00393g00413 Petunia axillaris HOM05D003806 ORTHO05D004346 6.6e-07 57.4 66 48.5
Peaxi162Scf00141g01119 Petunia axillaris HOM05D001948 ORTHO05D001873 2.5e-06 55.5 88 33.0
Aqoxy1G01455 Aquilegia oxysepala HOM05D003806 ORTHO05D004346 3.3e-06 55.1 89 34.8
THA.LOC104816049 Tarenaya hassleriana HOM05D003806 ORTHO05D004346 3.3e-06 55.1 77 39.0
Sabra16G0020700 Salix brachista HOM05D003806 ORTHO05D004346 4.3e-06 54.7 89 32.6
Sabra16G0025500 Salix brachista HOM05D003806 ORTHO05D004346 4.3e-06 54.7 89 32.6
PSO675G3405 Papaver somniferum HOM05D003806 ORTHO05D004346 5.6e-06 54.3 65 46.2
CsaV3_4G007390 Cucumis sativus L. HOM05D003806 ORTHO05D004346 9.6e-06 53.5 81 37.0
Potri.016G018700 Populus trichocarpa HOM05D003806 ORTHO05D004346 9.6e-06 53.5 65 41.5
QL04p061548 Quercus lobata HOM05D003806 ORTHO05D004346 9.6e-06 53.5 84 39.3


User provided reference genes

Program Settings