Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_62.g23648 Utricularia gibba HOM05D006600 ORTHO05D008446 1.5e-197 692.6 331 100.0
SGA_v2.0_scaffold244G44349 Striga asiatica HOM05D006600 ORTHO05D008446 3.3e-152 542.0 329 76.6
QL12p037547 Quercus lobata HOM05D006600 ORTHO05D008446 2.8e-151 538.9 323 76.8
THA.LOC104807092 Tarenaya hassleriana HOM05D006600 ORTHO05D008446 4.0e-150 535.0 327 74.6
Ah.15g092540 Amaranthus hybridus HOM05D006600 ORTHO05D008446 3.4e-149 531.9 327 74.3
Medtr3g102800 Medicago truncatula HOM05D006600 ORTHO05D008446 4.4e-149 531.6 325 75.4
Sabra14G0012400 Salix brachista HOM05D006600 ORTHO05D008446 5.8e-149 531.2 323 74.6
TPR.G33718 Trifolium pratense HOM05D006600 ORTHO05D008446 2.9e-148 528.9 325 74.8
Oeu050861.1 Olea europaea HOM05D006600 ORTHO05D008446 6.4e-148 527.7 323 76.2
Psat5g038240 Pisum sativum HOM05D006600 ORTHO05D008446 8.3e-148 527.3 325 74.5
PSO675G8764 Papaver somniferum HOM05D006600 ORTHO05D008446 2.4e-147 525.8 323 75.5
HanXRQChr10g0304021 Helianthus annuus HOM05D006600 ORTHO05D008446 1.2e-146 523.5 323 74.6
MBI16_g13383_MAGBIO Magnolia biondii HOM05D006600 ORTHO05D008446 1.2e-146 523.5 325 74.8
CiPaw.08G048500 Carya illinoinensis HOM05D006600 ORTHO05D008446 2.1e-146 522.7 324 75.3
CDE04G0491 Ceratophyllum demersum HOM05D006600 ORTHO05D008446 6.0e-146 521.2 325 73.2
Manes.18G044200 Manihot esculenta HOM05D006600 ORTHO05D008446 1.9e-144 516.2 321 73.2
Glyma.04G044500 Glycine max HOM05D006600 ORTHO05D008446 2.5e-144 515.8 323 74.3
Sopen04g031730 Solanum pennellii HOM05D006600 ORTHO05D008446 4.3e-144 515.0 323 72.1
AUR62038783 Chenopodium quinoa HOM05D006600 ORTHO05D008446 2.1e-143 512.7 327 71.6
Solyc04g078120.3 Solanum lycopersicum HOM05D006600 ORTHO05D008446 2.1e-143 512.7 323 71.8
Nitab4.5_0000934g0020 Nicotiana tabacum HOM05D006600 ORTHO05D008446 3.6e-143 511.9 324 72.8
Nitab4.5_0003228g0070 Nicotiana tabacum HOM05D006600 ORTHO05D008446 3.1e-142 508.8 324 72.5
Thecc.08G092000 Theobroma cacao HOM05D006600 ORTHO05D008446 8.9e-142 507.3 326 71.5
BolC3t18247H Brassica oleracea HOM05D006600 ORTHO05D008446 1.3e-140 503.4 318 72.3
C03p59830 Brassica napus HOM05D006600 ORTHO05D008446 8.4e-140 500.7 318 72.3
BcaB02g09901 Brassica carinata HOM05D006600 ORTHO05D008446 2.4e-139 499.2 320 71.2
AUR62037454 Chenopodium quinoa HOM05D006600 ORTHO05D008446 4.1e-139 498.4 327 70.6
BraA06t26199Z Brassica rapa HOM05D006600 ORTHO05D008446 5.4e-139 498.0 320 70.9
A06p32700 Brassica napus HOM05D006600 ORTHO05D008446 7.1e-139 497.7 320 70.9
Lj4A761T87 Lonicera japonica HOM05D006600 ORTHO05D008446 1.7e-137 493.0 287 79.1
MSTRG.1040 Avicennia marina HOM05D006600 ORTHO05D008446 2.3e-137 492.7 329 71.1
PSO541G2868 Papaver somniferum HOM05D006600 ORTHO05D008446 8.6e-137 490.7 323 71.2
HPP92_018760 Vanilla planifolia HOM05D006600 ORTHO05D008446 6.2e-135 484.6 318 71.1
Thhalv10005718m.g Eutrema salsugineum HOM05D006600 ORTHO05D008446 2.4e-134 482.6 320 69.7
Os03g0761200 Oryza sativa ssp. japonica HOM05D006600 ORTHO05D008446 2.4e-134 482.6 327 70.0
CAN.G1054.24 Capsicum annuum HOM05D006600 ORTHO05D008446 6.8e-134 481.1 287 75.3
Zm00001eb214310 Zea mays HOM05D006600 ORTHO05D008446 1.3e-132 476.9 331 68.3
SalBow7G4697 Salvia bowleyana HOM05D006600 ORTHO05D008446 2.4e-131 472.6 329 68.4
Migut.C00501 Erythranthe guttata HOM05D006600 ORTHO05D008446 5.1e-129 464.9 329 67.8
AT5G65860 Arabidopsis thaliana HOM05D006600 ORTHO05D008446 8.7e-129 464.2 320 67.8
Rhsim07G0222000 Rhododendron simsii HOM05D006600 ORTHO05D008446 8.7e-129 464.2 323 68.4
PGSC0003DMG400021533 Solanum tuberosum HOM05D006600 ORTHO05D008446 3.3e-128 462.2 323 66.6
BcaC01g02830 Brassica carinata HOM05D006600 ORTHO05D008446 1.3e-127 460.3 284 73.6
Lj1g0008642 Lotus japonicus HOM05D006600 ORTHO05D008446 2.4e-126 456.1 328 66.8
VMungo1309G2568 Vigna mungo HOM05D006600 ORTHO05D008446 1.2e-125 453.8 323 66.3
Ciclev10001599m.g Citrus clementina HOM05D006600 ORTHO05D008446 2.6e-125 452.6 327 65.1
Cc10_g05550 Coffea canephora HOM05D006600 ORTHO05D008446 3.4e-125 452.2 324 66.4
arahy.Tifrunner.gnm1.ann1.H62KW4 Arachis hypogaea HOM05D006600 ORTHO05D008446 5.8e-125 451.4 322 66.8
arahy.Tifrunner.gnm1.ann1.UTGV4K Arachis hypogaea HOM05D006600 ORTHO05D008446 5.8e-125 451.4 322 66.5
Ca_15912_v3 Cicer arietinum L. HOM05D006600 ORTHO05D008446 5.8e-125 451.4 325 65.8
Phvul.009G070400 Phaseolus vulgaris HOM05D006600 ORTHO05D008446 7.6e-125 451.1 323 65.9
Cfa013668 Carpinus fangiana HOM05D006600 ORTHO05D008446 9.9e-125 450.7 323 66.3
FAN20G2273 Fragaria x ananassa HOM05D006600 ORTHO05D008446 9.9e-125 450.7 323 64.7
Atru.chr13.803 Acer truncatum HOM05D006600 ORTHO05D008446 2.2e-124 449.5 327 64.8
CSS0036700 Camellia sinensis var. sinensis HOM05D006600 ORTHO05D008446 2.9e-124 449.1 324 65.4
Gorai.009G217900 Gossypium raimondii HOM05D006600 ORTHO05D008446 3.8e-124 448.7 327 64.8
Dinv44978 Davidia involucrata HOM05D006600 ORTHO05D008446 1.1e-123 447.2 323 67.2
CsaV3_2G026260 Cucumis sativus L. HOM05D006600 ORTHO05D008446 1.4e-123 446.8 323 64.4
TAR625G0631 Trochodendron aralioides HOM05D006600 ORTHO05D008446 1.4e-123 446.8 324 65.1
Glyma.06G045000 Glycine max HOM05D006600 ORTHO05D008446 1.9e-123 446.4 323 65.6
Gohir.A05G207900 Gossypium hirsutum HOM05D006600 ORTHO05D008446 2.4e-123 446.0 327 64.8
vmacro04585 Vaccinium macrocarpon HOM05D006600 ORTHO05D008446 2.4e-123 446.0 320 65.9
Prupe.1G425800 Prunus persica HOM05D006600 ORTHO05D008446 3.2e-123 445.7 328 64.9
TWI56G0382 Tripterygium wilfordii HOM05D006600 ORTHO05D008446 3.2e-123 445.7 327 64.8
Hma1.2p1_0923F.1_g236990 Hydrangea macrophylla HOM05D006600 ORTHO05D008446 4.2e-123 445.3 326 66.6
PGR083G0558 Punica granatum HOM05D006600 ORTHO05D008446 4.2e-123 445.3 328 64.9
Lalb_Chr23g0267431 Lupinus albus HOM05D006600 ORTHO05D008446 9.3e-123 444.1 324 64.5
Peaxi162Scf00081g00125 Petunia axillaris HOM05D006600 ORTHO05D008446 9.3e-123 444.1 326 63.2
DCAR_020080 Daucus carota HOM05D006600 ORTHO05D008446 1.6e-122 443.4 326 63.2
Eucgr.F00122 Eucalyptus grandis HOM05D006600 ORTHO05D008446 1.6e-122 443.4 322 66.1
Actinidia38095 Actinidia chinensis HOM05D006600 ORTHO05D008446 4.6e-122 441.8 325 65.2
EL10As7g23812 Beta vulgaris HOM05D006600 ORTHO05D008446 1.0e-121 440.7 371 59.0
COL.COLO4_28538 Corchorus olitorius HOM05D006600 ORTHO05D008446 1.0e-121 440.7 334 62.9
Gohir.D05G211400 Gossypium hirsutum HOM05D006600 ORTHO05D008446 1.0e-121 440.7 327 63.6
Aqoxy6G02751 Aquilegia oxysepala HOM05D006600 ORTHO05D008446 1.7e-121 439.9 329 64.4
Lsat_1_v5_gn_6_112481 Lactuca sativa HOM05D006600 ORTHO05D008446 5.1e-121 438.3 329 64.1
ClCG08G016350 Citrullus lanatus HOM05D006600 ORTHO05D008446 2.5e-120 436.0 323 63.5
SMO228G0045 Selaginella moellendorffii HOM05D006600 ORTHO05D008446 2.5e-120 436.0 318 64.8
MD08G1088100 Malus domestica HOM05D006600 ORTHO05D008446 3.3e-120 435.6 321 63.6
CANSAT35G1599 Cannabis sativa HOM05D006600 ORTHO05D008446 4.3e-120 435.3 330 64.5
Carub.0008s2674 Capsella rubella HOM05D006600 ORTHO05D008446 4.8e-119 431.8 319 63.6
Sed0004073 Sechium edule HOM05D006600 ORTHO05D008446 4.8e-119 431.8 323 62.2
GSVIVG01009372001 Vitis vinifera HOM05D006600 ORTHO05D008446 4.8e-119 431.8 251 77.3
ATR0030G048 Amborella trichopoda HOM05D006600 ORTHO05D008446 8.1e-119 431.0 328 63.1
MELO3C010818.2 Cucumis melo HOM05D006600 ORTHO05D008446 8.1e-119 431.0 323 62.8
CARHR279850 Cardamine hirsuta HOM05D006600 ORTHO05D008446 1.5e-117 426.8 327 62.1
Sp2g28940 Schrenkiella parvula HOM05D006600 ORTHO05D008446 1.5e-117 426.8 318 63.5
Haze_22302 Corylus avellana HOM05D006600 ORTHO05D008446 2.0e-117 426.4 323 63.5
RcHm_v2.0_Chr6g0309231 Rosa chinensis HOM05D006600 ORTHO05D008446 1.9e-115 419.9 327 60.6
FvH4_2g33350 Fragaria vesca HOM05D006600 ORTHO05D008446 7.1e-115 417.9 327 60.2
FAN15G1504 Fragaria x ananassa HOM05D006600 ORTHO05D008446 7.1e-115 417.9 323 61.0
FAN24G1058 Fragaria x ananassa HOM05D006600 ORTHO05D008446 1.6e-114 416.8 327 60.2
SEGI_28402 Sequoiadendron giganteum HOM05D006600 ORTHO05D008446 1.5e-112 410.2 320 60.6
Cpa.g.sc21.115 Carica papaya HOM05D006600 ORTHO05D008446 2.5e-112 409.5 251 74.9
Duzib093G2027 Durio zibethinus HOM05D006600 ORTHO05D008446 3.3e-112 409.1 260 71.9
FAN27G3009 Fragaria x ananassa HOM05D006600 ORTHO05D008446 1.1e-110 404.1 321 59.5
Aa31LG1G16240 Aethionema arabicum HOM05D006600 ORTHO05D008446 5.5e-107 391.7 308 61.7
COL.COLO4_28541 Corchorus olitorius HOM05D006600 ORTHO05D008446 1.5e-104 383.6 250 71.6
Mapoly0063s0069 Marchantia polymorpha HOM05D006600 ORTHO05D008446 1.1e-96 357.5 329 51.4
Nn1g04625 Nelumbo nucifera HOM05D006600 ORTHO05D008446 2.2e-95 353.2 323 54.8
AagrBONN_evm.TU.Sc2ySwM_228.1907 Anthoceros agrestis HOM05D006600 ORTHO05D008446 2.8e-95 352.8 322 53.7
Potri.014G019000 Populus trichocarpa HOM05D006600 ORTHO05D008446 2.3e-89 333.2 259 61.8
Hma1.2p1_0923F.1_g236980 Hydrangea macrophylla HOM05D006600 ORTHO05D008446 6.7e-89 331.6 281 61.2
ECA246G2737 Erigeron canadensis HOM05D006600 ORTHO05D008446 4.3e-88 328.9 264 61.0
Cre01.g050050 Chlamydomonas reinhardtii HOM05D006600 ORTHO05D008446 2.8e-87 326.2 378 43.7
BcaC01g02829 Brassica carinata HOM05D006600 ORTHO05D008446 3.7e-87 325.9 225 68.0
Sc26g0004110 Simmondsia chinensis HOM05D006600 ORTHO05D008446 5.7e-80 302.0 256 59.0
AL8G43570 Arabidopsis lyrata HOM05D006600 ORTHO05D008446 1.5e-75 287.3 244 57.8
MCO09G534 Micromonas commoda HOM05D006600 ORTHO05D008446 1.1e-67 261.2 331 40.8
Pp3c17_19880 Physcomitrium patens HOM05D006600 ORTHO05D008446 1.4e-65 254.2 251 49.8
MD15G1072900 Malus domestica HOM05D006600 ORTHO05D008446 4.7e-58 229.2 192 59.9
CBR_g40512 Chara braunii HOM05D000409 ORTHO05D000184 1.7e-55 220.7 187 54.5
TAR624G0301 Trochodendron aralioides HOM05D006600 ORTHO05D008446 1.1e-54 218.0 139 71.9
CDE07G1425 Ceratophyllum demersum HOM05D006600 ORTHO05D008446 7.3e-51 205.3 124 72.6
TAR374G0485 Trochodendron aralioides HOM05D000474 ORTHO05D003648 7.5e-48 195.3 127 70.1
Actinidia08258 Actinidia chinensis HOM05D006600 ORTHO05D008446 1.5e-40 171.0 95 80.0
CBR_g40511 Chara braunii HOM05D000019 ORTHO05D000002 4.7e-26 122.9 156 44.2
Oeu040380.1 Olea europaea HOM05D006600 ORTHO05D008446 1.9e-19 100.9 88 61.4
GSVIVG01038121001 Vitis vinifera HOM05D006600 ORTHO05D008446 4.3e-19 99.8 95 49.5
MBI16_g35586_MAGBIO Magnolia biondii HOM05D006600 ORTHO05D001493 2.9e-15 87.0 84 48.8
Actinidia08259 Actinidia chinensis HOM05D006600 ORTHO05D008446 1.4e-09 68.2 51 64.7
Dinv39240 Davidia involucrata HOM05D006600 ORTHO05D008446 5.8e-08 62.8 90 42.2


User provided reference genes

Program Settings