Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_62.g23279 Utricularia gibba HOM05D003931 ORTHO05D004577 1.0e-176 623.2 299 100.0
Migut.M01779 Erythranthe guttata HOM05D003931 ORTHO05D004577 1.3e-112 410.2 268 72.8
MSTRG.6909 Avicennia marina HOM05D003931 ORTHO05D004577 1.4e-106 390.2 264 70.5
Oeu042929.1 Olea europaea HOM05D003931 ORTHO05D004577 1.6e-105 386.7 275 67.6
CiPaw.11G187800 Carya illinoinensis HOM05D003931 ORTHO05D004577 7.9e-105 384.4 271 65.7
QL08p011429 Quercus lobata HOM05D003931 ORTHO05D004577 1.3e-104 383.6 261 67.0
QL08p011634 Quercus lobata HOM05D003931 ORTHO05D004577 1.3e-104 383.6 261 67.0
QL08p011649 Quercus lobata HOM05D003931 ORTHO05D004577 1.3e-104 383.6 261 67.0
Glyma.18G099500 Glycine max HOM05D003931 ORTHO05D004577 2.3e-104 382.9 275 66.5
Cfa020372 Carpinus fangiana HOM05D003931 ORTHO05D004577 3.0e-104 382.5 251 68.9
Potri.001G424700 Populus trichocarpa HOM05D003931 ORTHO05D004577 8.7e-104 380.9 273 65.2
SGA_v2.0_scaffold172G38997 Striga asiatica HOM05D003931 ORTHO05D004577 3.3e-103 379.0 271 67.5
Atru.chr2.3378 Acer truncatum HOM05D003931 ORTHO05D004577 5.6e-103 378.3 270 67.0
Haze_09657 Corylus avellana HOM05D003931 ORTHO05D004577 5.6e-103 378.3 251 68.5
Dinv40740 Davidia involucrata HOM05D003931 ORTHO05D004577 9.6e-103 377.5 229 74.7
HanXRQChr05g0159031 Helianthus annuus HOM05D003931 ORTHO05D004577 9.6e-103 377.5 277 64.6
TWI38G0918 Tripterygium wilfordii HOM05D003931 ORTHO05D004577 2.1e-102 376.3 260 66.2
Ca_14721_v3 Cicer arietinum L. HOM05D003931 ORTHO05D004577 2.8e-102 375.9 233 73.4
MELO3C025390.2 Cucumis melo HOM05D003931 ORTHO05D004577 4.8e-102 375.2 263 65.4
Phvul.006G040800 Phaseolus vulgaris HOM05D003931 ORTHO05D004577 4.8e-102 375.2 276 63.8
ClCG10G005490 Citrullus lanatus HOM05D003931 ORTHO05D004577 1.1e-101 374.0 264 65.2
Hma1.2p1_1271F.1_g271720 Hydrangea macrophylla HOM05D003931 ORTHO05D004577 1.4e-101 373.6 277 62.1
Glyma.08G314700 Glycine max HOM05D003931 ORTHO05D004577 1.8e-101 373.2 230 72.6
FAN21G1679 Fragaria x ananassa HOM05D003931 ORTHO05D004577 2.4e-101 372.9 274 62.4
FAN21G3611 Fragaria x ananassa HOM05D003931 ORTHO05D004577 2.4e-101 372.9 274 62.4
Sabra11G0123500 Salix brachista HOM05D003931 ORTHO05D004577 2.4e-101 372.9 267 66.7
Sabra16G0288300 Salix brachista HOM05D003931 ORTHO05D004577 3.1e-101 372.5 273 63.4
CsaV3_3G005230 Cucumis sativus L. HOM05D003931 ORTHO05D004577 4.0e-101 372.1 264 64.0
FAN16G2486 Fragaria x ananassa HOM05D003931 ORTHO05D004577 4.0e-101 372.1 281 61.9
Lsat_1_v5_gn_5_6120 Lactuca sativa HOM05D003931 ORTHO05D004577 4.0e-101 372.1 265 66.0
Prupe.4G210600 Prunus persica HOM05D003931 ORTHO05D004577 4.0e-101 372.1 301 60.8
VMungo0540G1582 Vigna mungo HOM05D003931 ORTHO05D004577 5.3e-101 371.7 262 65.6
TPR.G16574 Trifolium pratense HOM05D003931 ORTHO05D004577 9.0e-101 370.9 262 65.3
CAN.G337.115 Capsicum annuum HOM05D003931 ORTHO05D004577 1.5e-100 370.2 262 63.4
RcHm_v2.0_Chr5g0039071 Rosa chinensis HOM05D003931 ORTHO05D004577 1.5e-100 370.2 271 64.2
MD11G1221200 Malus domestica HOM05D003931 ORTHO05D004577 2.0e-100 369.8 247 70.0
FvH4_3g22400 Fragaria vesca HOM05D003931 ORTHO05D004577 2.6e-100 369.4 274 62.0
FAN11G2983 Fragaria x ananassa HOM05D003931 ORTHO05D004577 2.6e-100 369.4 274 62.4
Lsat_1_v5_gn_5_6180 Lactuca sativa HOM05D003931 ORTHO05D004577 2.6e-100 369.4 265 63.8
Medtr3g051220 Medicago truncatula HOM05D003931 ORTHO05D004577 3.4e-100 369.0 267 64.4
CANSAT64G1454 Cannabis sativa HOM05D003931 ORTHO05D004577 4.5e-100 368.6 296 59.5
Manes.15G073200 Manihot esculenta HOM05D003931 ORTHO05D004577 4.5e-100 368.6 231 72.7
Lj6g0018199 Lotus japonicus HOM05D003931 ORTHO05D004577 5.8e-100 368.2 262 67.2
Solyc07g064410.1 Solanum lycopersicum HOM05D003931 ORTHO05D004577 5.8e-100 368.2 264 63.6
Nitab4.5_0001604g0100 Nicotiana tabacum HOM05D003931 ORTHO05D004577 7.6e-100 367.9 240 70.0
Eucgr.F00963 Eucalyptus grandis HOM05D003931 ORTHO05D004577 2.2e-99 366.3 256 66.4
arahy.Tifrunner.gnm1.ann1.07EMGU Arachis hypogaea HOM05D003931 ORTHO05D004577 2.9e-99 365.9 231 71.4
Sopen07g032620 Solanum pennellii HOM05D003931 ORTHO05D004577 2.9e-99 365.9 264 63.3
PGSC0003DMG400022225 Solanum tuberosum HOM05D003931 ORTHO05D004577 3.8e-99 365.5 235 67.7
THA.LOC104809192 Tarenaya hassleriana HOM05D003931 ORTHO05D004577 6.5e-99 364.8 266 63.9
TAR626G0527 Trochodendron aralioides HOM05D003931 ORTHO05D004577 6.5e-99 364.8 273 63.7
Psat5g180680 Pisum sativum HOM05D003931 ORTHO05D004577 8.4e-99 364.4 263 65.0
MD03G1205300 Malus domestica HOM05D003931 ORTHO05D004577 1.1e-98 364.0 244 69.3
Thhalv10027264m.g Eutrema salsugineum HOM05D003931 ORTHO05D004577 4.2e-98 362.1 267 64.8
Sed0028072 Sechium edule HOM05D003931 ORTHO05D004577 4.2e-98 362.1 279 60.2
Ciclev10009005m.g Citrus clementina HOM05D003931 ORTHO05D004577 9.3e-98 360.9 262 64.1
Carub.0007s1381 Capsella rubella HOM05D003931 ORTHO05D004577 2.1e-97 359.8 281 63.0
Aqoxy1G03269 Aquilegia oxysepala HOM05D003931 ORTHO05D004577 3.5e-97 359.0 277 62.1
Gorai.002G087700 Gossypium raimondii HOM05D003931 ORTHO05D004577 3.5e-97 359.0 276 60.1
Actinidia09908 Actinidia chinensis HOM05D003931 ORTHO05D004577 4.6e-97 358.6 262 63.4
PGR083G2742 Punica granatum HOM05D003931 ORTHO05D004577 4.6e-97 358.6 235 69.8
Lj1C870G17 Lonicera japonica HOM05D003931 ORTHO05D004577 6.0e-97 358.2 231 68.0
Gohir.A01G078700 Gossypium hirsutum HOM05D003931 ORTHO05D004577 7.9e-97 357.8 276 60.1
Gohir.D01G065800 Gossypium hirsutum HOM05D003931 ORTHO05D004577 1.0e-96 357.5 276 59.8
BolC1t02250H Brassica oleracea HOM05D003931 ORTHO05D004577 5.1e-96 355.1 267 61.8
BcaB03g12524 Brassica carinata HOM05D003931 ORTHO05D004577 8.7e-96 354.4 267 61.8
C01p23150 Brassica napus HOM05D003931 ORTHO05D004577 8.7e-96 354.4 252 64.7
Nn1g03571 Nelumbo nucifera HOM05D003931 ORTHO05D004577 8.7e-96 354.4 231 71.0
BcaC07g38267 Brassica carinata HOM05D003931 ORTHO05D004577 1.1e-95 354.0 230 69.6
C08p10140 Brassica napus HOM05D003931 ORTHO05D004577 1.1e-95 354.0 230 69.6
BolC8t48692H Brassica oleracea HOM05D003931 ORTHO05D004577 1.1e-95 354.0 230 69.6
A01p18190 Brassica napus HOM05D003931 ORTHO05D004577 1.5e-95 353.6 267 61.8
BraA01t01774Z Brassica rapa HOM05D003931 ORTHO05D004577 1.5e-95 353.6 267 61.4
Cc05_g13590 Coffea canephora HOM05D003931 ORTHO05D004577 1.5e-95 353.6 225 70.7
vmacro11735 Vaccinium macrocarpon HOM05D003931 ORTHO05D004577 1.5e-95 353.6 247 66.8
Ah.04g165790 Amaranthus hybridus HOM05D003931 ORTHO05D004577 1.9e-95 353.2 268 61.2
BraA08t34014Z Brassica rapa HOM05D003931 ORTHO05D004577 2.5e-95 352.8 231 69.3
Lalb_Chr02g0155621 Lupinus albus HOM05D003931 ORTHO05D004577 2.5e-95 352.8 243 67.1
A08p20580 Brassica napus HOM05D003931 ORTHO05D004577 3.3e-95 352.4 231 68.8
Thecc.07G042800 Theobroma cacao HOM05D003931 ORTHO05D004577 3.3e-95 352.4 240 67.1
Lalb_Chr06g0171911 Lupinus albus HOM05D003931 ORTHO05D004577 4.3e-95 352.1 273 60.4
Aa31LG5G10360 Aethionema arabicum HOM05D003931 ORTHO05D004577 9.7e-95 350.9 273 61.9
Sp7g25010 Schrenkiella parvula HOM05D003931 ORTHO05D004577 1.3e-94 350.5 267 61.8
AUR62020469 Chenopodium quinoa HOM05D003931 ORTHO05D004577 1.6e-94 350.1 231 66.7
AUR62015742 Chenopodium quinoa HOM05D003931 ORTHO05D004577 2.2e-94 349.7 232 66.8
CARHR234700 Cardamine hirsuta HOM05D003931 ORTHO05D004577 1.1e-93 347.4 224 69.6
AL7G25800 Arabidopsis lyrata HOM05D003931 ORTHO05D004577 2.4e-93 346.3 225 69.8
ATR0752G116 Amborella trichopoda HOM05D003931 ORTHO05D004577 5.3e-93 345.1 261 62.5
Peaxi162Scf00450g00075 Petunia axillaris HOM05D003931 ORTHO05D004577 3.4e-92 342.4 216 71.8
AT4G27030 Arabidopsis thaliana HOM05D003931 ORTHO05D004577 5.9e-92 341.7 224 69.2
Sc03g0008690 Simmondsia chinensis HOM05D003931 ORTHO05D004577 5.9e-92 341.7 272 58.1
EL10Ac4g07844 Beta vulgaris HOM05D003931 ORTHO05D004577 2.9e-91 339.3 269 58.4
PSO675G5012 Papaver somniferum HOM05D003931 ORTHO05D004577 3.8e-91 339.0 242 64.9
CDE05G0277 Ceratophyllum demersum HOM05D003931 ORTHO05D007395 8.5e-91 337.8 257 60.3
Carub.0002s0286 Capsella rubella HOM05D003931 ORTHO05D004577 5.5e-90 335.1 271 57.6
PSO541G1838 Papaver somniferum HOM05D003931 ORTHO05D004577 5.5e-90 335.1 243 64.2
DCAR_008677 Daucus carota HOM05D003931 ORTHO05D004577 1.6e-89 333.6 235 63.8
Duzib213G0550 Durio zibethinus HOM05D003931 ORTHO05D004577 4.6e-89 332.0 273 58.2
Cfa009708 Carpinus fangiana HOM05D003931 ORTHO05D004577 3.9e-88 328.9 219 68.9
AT1G62190 Arabidopsis thaliana HOM05D003931 ORTHO05D004577 2.5e-87 326.2 272 54.8
CARHR049940 Cardamine hirsuta HOM05D003931 ORTHO05D004577 3.3e-87 325.9 272 55.5
Sc03g0008680 Simmondsia chinensis HOM05D003931 ORTHO05D004577 4.3e-87 325.5 267 57.3
Thhalv10026787m.g Eutrema salsugineum HOM05D003931 ORTHO05D004577 1.3e-86 323.9 272 55.9
Thhalv10025879m.g Eutrema salsugineum HOM05D003931 ORTHO05D004577 2.2e-86 323.2 278 55.8
Sp7g24990 Schrenkiella parvula HOM05D003931 ORTHO05D004577 3.7e-86 322.4 291 53.3
Aa31LG5G10380 Aethionema arabicum HOM05D003931 ORTHO05D004577 4.8e-86 322.0 231 63.2
Nitab4.5_0004336g0020 Nicotiana tabacum HOM05D003931 ORTHO05D004577 1.4e-85 320.5 211 69.7
C07p55050 Brassica napus HOM05D003931 ORTHO05D004577 2.4e-85 319.7 291 52.2
Haze_23062 Corylus avellana HOM05D003931 ORTHO05D004577 9.1e-85 317.8 232 64.2
QL08p011463 Quercus lobata HOM05D003931 ORTHO05D004577 3.4e-84 315.8 240 61.7
Rhsim06G0216100 Rhododendron simsii HOM05D003931 ORTHO05D004577 3.4e-84 315.8 190 74.7
BcaC06g32716 Brassica carinata HOM05D003931 ORTHO05D004577 4.5e-84 315.5 265 55.1
BolC7t46007H Brassica oleracea HOM05D003931 ORTHO05D004577 1.3e-83 313.9 291 51.9
BraA03t14771Z Brassica rapa HOM05D003931 ORTHO05D004577 1.3e-83 313.9 263 55.1
A03p57020 Brassica napus HOM05D003931 ORTHO05D004577 3.8e-83 312.4 263 54.8
Sp7g25000 Schrenkiella parvula HOM05D003931 ORTHO05D004577 1.9e-82 310.1 266 57.5
Prupe.4G210500 Prunus persica HOM05D003931 ORTHO05D004577 3.2e-82 309.3 209 68.4
vmacro11734 Vaccinium macrocarpon HOM05D003931 ORTHO05D004577 3.2e-82 309.3 232 58.2
Atru.chr2.3340 Acer truncatum HOM05D003931 ORTHO05D004577 1.2e-81 307.4 229 61.6
AL4G12480 Arabidopsis lyrata HOM05D003931 ORTHO05D004577 4.7e-81 305.4 282 52.1
AUR62015741 Chenopodium quinoa HOM05D003931 ORTHO05D004577 1.0e-80 304.3 228 58.8
Atru.chr2.3337 Acer truncatum HOM05D003931 ORTHO05D004577 5.1e-80 302.0 230 60.9
BcaB03g12523 Brassica carinata HOM05D003931 ORTHO05D004577 1.5e-79 300.4 282 52.5
Lsat_1_v5_gn_5_5140 Lactuca sativa HOM05D003931 ORTHO05D004577 2.6e-79 299.7 230 58.7
Carub.0004s0202 Capsella rubella HOM05D003931 ORTHO05D004577 3.3e-79 299.3 230 60.9
PGSC0003DMG400004435 Solanum tuberosum HOM05D003931 ORTHO05D004577 4.4e-79 298.9 236 57.6
Lj6g0018599 Lotus japonicus HOM05D003931 ORTHO05D004577 7.4e-79 298.1 253 54.2
AT2G22890 Arabidopsis thaliana HOM05D003931 ORTHO05D004577 6.3e-78 295.0 222 60.4
Sc03g0008670 Simmondsia chinensis HOM05D003931 ORTHO05D004577 8.2e-78 294.7 270 51.1
BcaC07g38266 Brassica carinata HOM05D003931 ORTHO05D004577 2.4e-77 293.1 282 51.8
C08p10100 Brassica napus HOM05D003931 ORTHO05D004577 2.4e-77 293.1 282 51.8
BolC8t48689H Brassica oleracea HOM05D003931 ORTHO05D004577 2.4e-77 293.1 282 51.8
A08p20590 Brassica napus HOM05D003931 ORTHO05D004577 4.1e-77 292.4 282 51.4
BraA08t34015Z Brassica rapa HOM05D003931 ORTHO05D004577 5.3e-77 292.0 282 51.4
BcaC07g38264 Brassica carinata HOM05D003931 ORTHO05D004577 7.0e-77 291.6 282 51.4
CSS0050113 Camellia sinensis var. sinensis HOM05D003931 ORTHO05D004577 9.1e-77 291.2 197 70.1
Oeu062594.1 Olea europaea HOM05D003931 ORTHO05D004577 2.0e-76 290.0 221 58.8
CANSAT11G0562 Cannabis sativa HOM05D003931 ORTHO05D004577 4.7e-73 278.9 225 58.7
SEGI_34207 Sequoiadendron giganteum HOM05D003931 ORTHO05D004577 9.7e-71 271.2 230 52.6
BolC8t48691H Brassica oleracea HOM05D003931 ORTHO05D004577 2.2e-67 260.0 198 61.1
SGA_v2.0_scaffold9G05067 Striga asiatica HOM05D003931 ORTHO05D004577 2.9e-67 259.6 237 52.3
Migut.H01835 Erythranthe guttata HOM05D003931 ORTHO05D004577 1.1e-66 257.7 230 53.5
Zm00001eb413170 Zea mays HOM05D003931 ORTHO05D004577 5.5e-66 255.4 230 53.0
COL.COLO4_09644 Corchorus olitorius HOM05D003931 ORTHO05D004577 9.4e-66 254.6 230 54.8
QL09p032903 Quercus lobata HOM05D003931 ORTHO05D004577 4.7e-65 252.3 159 70.4
Migut.H01834 Erythranthe guttata HOM05D003931 ORTHO05D004577 8.0e-65 251.5 228 52.6
Os08g0187900 Oryza sativa ssp. japonica HOM05D003931 ORTHO05D004577 3.0e-64 249.6 235 52.8
AagrBONN_evm.TU.Sc2ySwM_368.1941 Anthoceros agrestis HOM05D003931 ORTHO05D004577 8.8e-64 248.1 254 47.6
Cpa.g.sc97.27 Carica papaya HOM05D003931 ORTHO05D004577 8.8e-64 248.1 177 63.8
Mapoly0034s0071 Marchantia polymorpha HOM05D003931 ORTHO05D004577 4.4e-63 245.7 229 48.9
CANSAT11G1176 Cannabis sativa HOM05D003931 ORTHO05D004577 2.4e-61 240.0 219 52.1
SMO364G0503 Selaginella moellendorffii HOM05D003931 ORTHO05D004577 2.4e-61 240.0 229 50.2
unitig_749.g13966 Utricularia gibba HOM05D003931 ORTHO05D004577 2.4e-61 240.0 226 50.0
Eucgr.L01106 Eucalyptus grandis HOM05D003931 ORTHO05D004577 4.1e-61 239.2 212 56.1
SGA_v2.0_scaffold9G05070 Striga asiatica HOM05D003931 ORTHO05D004577 1.3e-59 234.2 238 46.2
Aqoxy1G03270 Aquilegia oxysepala HOM05D003931 ORTHO05D004577 1.7e-59 233.8 217 51.6
FAN11G0561 Fragaria x ananassa HOM05D003931 ORTHO05D004577 2.9e-59 233.0 214 54.2
Pp3c13_12570 Physcomitrium patens HOM05D003931 ORTHO05D004577 6.8e-56 221.9 233 43.8
Migut.H01836 Erythranthe guttata HOM05D003931 ORTHO05D004577 1.2e-55 221.1 222 48.6
Cre16.g673001 Chlamydomonas reinhardtii HOM05D003931 ORTHO05D004577 3.4e-55 219.5 250 44.8
Cfa009711 Carpinus fangiana HOM05D003931 ORTHO05D004577 8.3e-54 214.9 176 61.4
MCO05G373 Micromonas commoda HOM05D003931 ORTHO05D004577 4.1e-53 212.6 195 50.8
CDE05G0281 Ceratophyllum demersum HOM05D003931 ORTHO05D004577 7.7e-52 208.4 179 54.2
COL.COLO4_07219 Corchorus olitorius HOM05D003931 ORTHO05D004577 8.0e-49 198.4 130 68.5
ECA246G1165 Erigeron canadensis HOM05D003931 ORTHO05D004577 2.3e-48 196.8 152 59.2
Zm00001eb413200 Zea mays HOM05D003931 ORTHO05D004577 2.0e-47 193.7 234 46.2
CBR_g30523 Chara braunii HOM05D003931 ORTHO05D004577 4.9e-46 189.1 320 34.1
FvH4_3g22391 Fragaria vesca HOM05D003931 ORTHO05D004577 2.0e-44 183.7 188 47.3
PRCOL_00003954 Prasinoderma coloniale HOM05D003931 ORTHO05D004577 2.7e-44 183.3 223 41.7
Haze_23061 Corylus avellana HOM05D003931 ORTHO05D004577 7.8e-44 181.8 151 58.3
COL.COLO4_07218 Corchorus olitorius HOM05D003931 ORTHO05D004577 8.3e-38 161.8 109 67.9
AL3G48190 Arabidopsis lyrata HOM05D003931 ORTHO05D004577 2.8e-33 146.7 97 61.9
C01p23190 Brassica napus HOM05D003931 ORTHO05D004577 7.5e-31 138.7 87 71.3
C08p10120 Brassica napus HOM05D003931 ORTHO05D004577 1.8e-24 117.5 92 57.6
unitig_26.g9960 Utricularia gibba HOM05D003931 ORTHO05D004577 3.8e-14 83.2 74 52.7
BcaC06g32715 Brassica carinata HOM05D003931 ORTHO05D004577 9.2e-13 78.6 49 69.4
BcaC09g50623 Brassica carinata HOM05D003931 ORTHO05D004577 2.5e-10 70.5 96 40.6
unitig_26.g9959 Utricularia gibba HOM05D001404 ORTHO05D026306 4.0e-08 63.2 41 65.9


User provided reference genes

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