Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_62.g23260 Utricularia gibba HOM05D007599 ORTHO05D009548 1.1e-41 172.9 88 100.0
HanXRQChr17g0534931 Helianthus annuus HOM05D007599 ORTHO05D009548 2.9e-31 138.3 88 79.5
Lsat_1_v5_gn_3_11180 Lactuca sativa HOM05D007599 ORTHO05D009548 3.8e-31 137.9 87 78.2
Oeu029803.1 Olea europaea HOM05D007599 ORTHO05D009548 1.9e-30 135.6 85 82.4
Sopen10g024670 Solanum pennellii HOM05D007599 ORTHO05D009548 4.6e-29 131.0 89 74.2
EL10Ac5g12394 Beta vulgaris HOM05D007599 ORTHO05D009548 1.1e-27 126.3 88 76.1
PGSC0003DMG400012109 Solanum tuberosum HOM05D007599 ORTHO05D009548 3.3e-27 124.8 88 73.9
MSTRG.12224 Avicennia marina HOM05D007599 ORTHO05D009548 7.4e-27 123.6 79 81.0
ClCG01G001340 Citrullus lanatus HOM05D007599 ORTHO05D009548 7.4e-27 123.6 84 77.4
GSVIVG01019698001 Vitis vinifera HOM05D007599 ORTHO05D009548 9.6e-27 123.2 86 73.3
Os02g0682600 Oryza sativa ssp. japonica HOM05D007599 ORTHO05D009548 1.6e-26 122.5 85 75.3
Solyc08g083380.2 Solanum lycopersicum HOM05D007599 ORTHO05D009548 1.6e-26 122.5 89 70.8
AL2G14680 Arabidopsis lyrata HOM05D007599 ORTHO05D009548 2.8e-26 121.7 88 71.6
Sc07g0010220 Simmondsia chinensis HOM05D007599 ORTHO05D009548 8.2e-26 120.2 87 72.4
Sed0012861 Sechium edule HOM05D007599 ORTHO05D009548 1.1e-25 119.8 84 73.8
Mapoly0015s0046 Marchantia polymorpha HOM05D007599 ORTHO05D009548 4.0e-25 117.9 84 67.9
Atru.chr9.1835 Acer truncatum HOM05D007599 ORTHO05D009548 1.5e-24 115.9 86 67.4
AUR62007084 Chenopodium quinoa HOM05D007599 ORTHO05D009548 1.5e-24 115.9 87 65.5
AUR62019947 Chenopodium quinoa HOM05D007599 ORTHO05D009548 1.5e-24 115.9 87 65.5
Thhalv10019387m.g Eutrema salsugineum HOM05D007599 ORTHO05D009548 2.0e-24 115.5 84 66.7
Ciclev10023088m.g Citrus clementina HOM05D007599 ORTHO05D009548 2.2e-23 112.1 85 65.9
MELO3C005802.2 Cucumis melo HOM05D007599 ORTHO05D009548 2.9e-23 111.7 84 71.4
CsaV3_5G001470 Cucumis sativus L. HOM05D007599 ORTHO05D009548 2.9e-23 111.7 84 71.4
Gohir.A12G242400 Gossypium hirsutum HOM05D007599 ORTHO05D009548 8.4e-23 110.2 88 64.8
AagrBONN_evm.TU.Sc2ySwM_117.1837 Anthoceros agrestis HOM05D007599 ORTHO05D009548 1.9e-22 109.0 85 64.7
SGA_v2.0_scaffold88G27242 Striga asiatica HOM05D007599 ORTHO05D009548 1.6e-21 105.9 124 50.0
Migut.E00717 Erythranthe guttata HOM05D007599 ORTHO05D009548 2.1e-21 105.5 67 79.1
Duzib084G0922 Durio zibethinus HOM05D007599 ORTHO05D009548 6.1e-21 104.0 88 61.4
Pp3c25_10700 Physcomitrium patens HOM05D007599 ORTHO05D009548 1.8e-20 102.4 85 61.2
Actinidia22230 Actinidia chinensis HOM05D007599 ORTHO05D009548 1.9e-19 99.0 85 63.5
CAN.G567.112 Capsicum annuum HOM05D007599 ORTHO05D009548 1.6e-18 95.9 88 60.2
FAN18G2966 Fragaria x ananassa HOM05D007599 ORTHO05D009548 2.2e-18 95.5 110 46.4
AT1G61570 Arabidopsis thaliana HOM05D007599 ORTHO05D009548 1.8e-17 92.4 88 53.4
TPR.G21312 Trifolium pratense HOM05D007599 ORTHO05D009548 4.1e-17 91.3 85 52.9
Rhsim02G0254600 Rhododendron simsii HOM05D007599 ORTHO05D009548 2.0e-16 89.0 47 85.1
CDE09G0527 Ceratophyllum demersum HOM05D007599 ORTHO05D009548 1.3e-15 86.3 87 54.0
CDE11G1025 Ceratophyllum demersum HOM05D007599 ORTHO05D009548 1.7e-15 85.9 87 55.2
FvH4_5g07140 Fragaria vesca HOM05D007599 ORTHO05D009548 1.7e-15 85.9 72 51.4
Sabra16G0305100 Salix brachista HOM05D007599 ORTHO05D009548 5.0e-15 84.3 48 83.3
FAN08G0537 Fragaria x ananassa HOM05D007599 ORTHO05D009548 8.5e-15 83.6 72 50.0
FAN08G0181 Fragaria x ananassa HOM05D007599 ORTHO05D009548 1.4e-14 82.8 143 35.7
Rhsim07G0075900 Rhododendron simsii HOM05D007599 ORTHO05D009548 3.2e-14 81.6 87 52.9
FAN13G2393 Fragaria x ananassa HOM05D007599 ORTHO05D009548 4.2e-14 81.3 72 48.6
RcHm_v2.0_Chr7g0187811 Rosa chinensis HOM05D007599 ORTHO05D009548 7.2e-14 80.5 82 47.6
Gohir.D12G243500 Gossypium hirsutum HOM05D007599 ORTHO05D009548 9.4e-14 80.1 88 51.1
Gorai.008G260900 Gossypium raimondii HOM05D007599 ORTHO05D009548 9.4e-14 80.1 88 51.1
Os01g0932550 Oryza sativa ssp. japonica HOM05D007599 ORTHO05D009548 1.6e-13 79.3 47 76.6
Duzib068G0772 Durio zibethinus HOM05D007599 ORTHO05D009548 2.1e-13 79.0 85 50.6
PRCOL_00005458 Prasinoderma coloniale HOM05D007599 ORTHO05D009548 2.7e-13 78.6 75 42.7
MCO15G174 Micromonas commoda HOM05D007599 ORTHO05D009548 3.6e-13 78.2 63 54.0
Cre16.g650800 Chlamydomonas reinhardtii HOM05D007599 ORTHO05D009548 7.9e-13 77.0 84 40.5
Manes.02G000300 Manihot esculenta HOM05D007599 ORTHO05D009548 7.9e-13 77.0 85 52.9
AagrBONN_evm.TU.Sc2ySwM_344.1292 Anthoceros agrestis HOM05D007599 ORTHO05D009548 1.8e-12 75.9 85 50.6
COL.COLO4_10843 Corchorus olitorius HOM05D007599 ORTHO05D009548 8.8e-12 73.6 90 46.7
Manes.01G000403 Manihot esculenta HOM05D007599 ORTHO05D009548 1.1e-11 73.2 85 48.2
Sp5g30310 Schrenkiella parvula HOM05D007599 ORTHO05D009548 1.5e-11 72.8 82 47.6
CiPaw.12G074700 Carya illinoinensis HOM05D007599 ORTHO05D009548 2.0e-11 72.4 86 50.0
Cc08_g17030 Coffea canephora HOM05D007599 ORTHO05D009548 2.0e-11 72.4 85 48.2
FvH4_5g10420 Fragaria vesca HOM05D007599 ORTHO05D009548 5.7e-11 70.9 82 42.7
BcaC08g45594 Brassica carinata HOM05D007599 ORTHO05D009548 7.4e-11 70.5 87 46.0
Nitab4.5_0000357g0300 Nicotiana tabacum HOM05D007599 ORTHO05D009548 7.4e-11 70.5 88 48.9
SHI06900 Sapria himalayana HOM05D007599 ORTHO05D009548 2.2e-10 68.9 46 65.2
Actinidia27277 Actinidia chinensis HOM05D007599 ORTHO05D009548 6.3e-10 67.4 85 49.4
Carub.0002s0362 Capsella rubella HOM05D007599 ORTHO05D009548 6.3e-10 67.4 87 43.7
AL1G56360 Arabidopsis lyrata HOM05D007599 ORTHO05D009548 1.1e-09 66.6 37 83.8
CBR_g48723 Chara braunii HOM05D007599 ORTHO05D009548 1.1e-09 66.6 83 47.0
CARHR050820 Cardamine hirsuta HOM05D007599 ORTHO05D009548 1.4e-09 66.2 87 42.5
TWI60G1211 Tripterygium wilfordii HOM05D007599 ORTHO05D009548 1.4e-09 66.2 84 46.4
TWI81G0432 Tripterygium wilfordii HOM05D007599 ORTHO05D009548 1.4e-09 66.2 84 47.6
CANSAT21G1781 Cannabis sativa HOM05D007599 ORTHO05D009548 1.8e-09 65.9 85 41.2
CSS0029258 Camellia sinensis var. sinensis HOM05D007599 ORTHO05D009548 4.1e-09 64.7 85 47.1
BcaC08g46942 Brassica carinata HOM05D007599 ORTHO05D009548 5.3e-09 64.3 82 43.9
C06p49140 Brassica napus HOM05D007599 ORTHO05D009548 5.3e-09 64.3 82 43.9
BolC6t39948H Brassica oleracea HOM05D001180 ORTHO05D001055 5.3e-09 64.3 82 43.9
BcaNung06629 Brassica carinata HOM05D007599 ORTHO05D009548 6.9e-09 63.9 87 41.4
BcaB02g07013 Brassica carinata HOM05D007599 ORTHO05D009548 9.1e-09 63.5 87 41.4
FAN13G0770 Fragaria x ananassa HOM05D007599 ORTHO05D009548 9.1e-09 63.5 36 72.2
Haze_27758 Corylus avellana HOM05D007599 ORTHO05D009548 1.2e-08 63.2 65 43.1
PSO135G0169 Papaver somniferum HOM05D007599 ORTHO05D009548 1.2e-08 63.2 84 47.6
PSO384G2353 Papaver somniferum HOM05D007599 ORTHO05D009548 1.2e-08 63.2 84 47.6
TAR374G1499 Trochodendron aralioides HOM05D007599 ORTHO05D009548 1.2e-08 63.2 64 54.7
Dinv18777 Davidia involucrata HOM05D007599 ORTHO05D009548 1.5e-08 62.8 87 44.8
C06p32780 Brassica napus HOM05D007599 ORTHO05D009548 2.6e-08 62.0 87 41.4
FAN04G0849 Fragaria x ananassa HOM05D007599 ORTHO05D009548 4.5e-08 61.2 82 37.8
BolC6t38400H Brassica oleracea HOM05D007599 ORTHO05D009548 1.3e-07 59.7 87 40.2
A07p29010 Brassica napus HOM05D007599 ORTHO05D009548 3.8e-07 58.2 87 40.2
BraA07t30541Z Brassica rapa HOM05D007599 ORTHO05D009548 3.8e-07 58.2 87 40.2
Haze_09213 Corylus avellana HOM05D007599 ORTHO05D009548 5.0e-07 57.8 86 41.9
BraA07t31618Z Brassica rapa HOM05D001180 ORTHO05D001055 4.2e-06 54.7 74 43.2


User provided reference genes

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