Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_62.g23243 Utricularia gibba HOM05D006473 ORTHO05D008108 4.2e-75 284.6 147 100.0
Migut.H01260 Erythranthe guttata HOM05D006473 ORTHO05D008108 8.3e-15 84.3 155 36.8
Nitab4.5_0002292g0030 Nicotiana tabacum HOM05D006473 ORTHO05D008108 1.0e-09 67.4 48 62.5
PGSC0003DMG400013558 Solanum tuberosum HOM05D006473 ORTHO05D008108 5.2e-09 65.1 144 36.8
Sc07g0001930 Simmondsia chinensis HOM05D006473 ORTHO05D008108 1.2e-08 63.9 135 37.8
CSS0026100 Camellia sinensis var. sinensis HOM05D006473 ORTHO05D008108 1.5e-08 63.5 56 62.5
CSS0046570 Camellia sinensis var. sinensis HOM05D006473 ORTHO05D008108 1.5e-08 63.5 56 62.5
DCAR_029496 Daucus carota HOM05D006473 ORTHO05D008108 2.0e-08 63.2 36 80.6
ECA247G3587 Erigeron canadensis HOM05D006473 ORTHO05D008108 2.6e-08 62.8 40 70.0
Nn7g38339 Nelumbo nucifera HOM05D006473 ORTHO05D008108 2.6e-08 62.8 125 36.8
Solyc07g043070.3 Solanum lycopersicum HOM05D006473 ORTHO05D008108 5.8e-08 61.6 100 40.0
Sopen07g022630 Solanum pennellii HOM05D006473 ORTHO05D008108 5.8e-08 61.6 100 40.0
Glyma.20G063000 Glycine max HOM05D006473 ORTHO05D008108 7.5e-08 61.2 122 35.2
PSO675G8005 Papaver somniferum HOM05D006473 ORTHO05D008108 7.5e-08 61.2 34 79.4
Peaxi162Scf00393g01011 Petunia axillaris HOM05D006473 ORTHO05D008108 7.5e-08 61.2 90 42.2
TWI34G1686 Tripterygium wilfordii HOM05D006473 ORTHO05D008108 7.5e-08 61.2 35 80.0
TAR626G1390 Trochodendron aralioides HOM05D006473 ORTHO05D008108 7.5e-08 61.2 120 35.0
Atru.chr8.1011 Acer truncatum HOM05D006473 ORTHO05D008108 9.8e-08 60.8 35 80.0
Nitab4.5_0000170g0320 Nicotiana tabacum HOM05D006473 ORTHO05D008108 9.8e-08 60.8 101 37.6
CANSAT64G1482 Cannabis sativa HOM05D006473 ORTHO05D008108 1.3e-07 60.5 44 68.2
CAN.G529.20 Capsicum annuum HOM05D006473 ORTHO05D008108 1.7e-07 60.1 134 36.6
Prupe.3G184300 Prunus persica HOM05D006473 ORTHO05D008108 1.7e-07 60.1 98 44.9
Lsat_1_v5_gn_1_29560 Lactuca sativa HOM05D006473 ORTHO05D008108 2.2e-07 59.7 35 74.3
MD17G1129800 Malus domestica HOM05D006473 ORTHO05D008108 2.2e-07 59.7 35 77.1
RcHm_v2.0_Chr2g0153221 Rosa chinensis HOM05D006473 ORTHO05D008108 2.2e-07 59.7 35 77.1
ClCG11G016910 Citrullus lanatus HOM05D006473 ORTHO05D008108 2.9e-07 59.3 38 71.1
CsaV3_4G032520 Cucumis sativus L. HOM05D006473 ORTHO05D008108 2.9e-07 59.3 38 71.1
FAN05G1961 Fragaria x ananassa HOM05D006473 ORTHO05D008108 2.9e-07 59.3 35 74.3
FAN09G0937 Fragaria x ananassa HOM05D006473 ORTHO05D008108 2.9e-07 59.3 35 74.3
FAN14G2613 Fragaria x ananassa HOM05D006473 ORTHO05D008108 2.9e-07 59.3 35 74.3
Sed0014549 Sechium edule HOM05D006473 ORTHO05D008108 2.9e-07 59.3 45 62.2
Peaxi162Scf00322g00416 Petunia axillaris HOM05D006473 ORTHO05D008108 3.7e-07 58.9 61 55.7
SGA_v2.0_scaffold49G18372 Striga asiatica HOM05D006473 ORTHO05D008108 3.7e-07 58.9 125 36.0
Aqoxy5G02466 Aquilegia oxysepala HOM05D006473 ORTHO05D008108 4.9e-07 58.5 129 32.6
CiPaw.03G109100 Carya illinoinensis HOM05D006473 ORTHO05D008108 4.9e-07 58.5 35 74.3
Thecc.01G174700 Theobroma cacao HOM05D006473 ORTHO05D008108 4.9e-07 58.5 128 37.5
HanXRQChr02g0035171 Helianthus annuus HOM05D006473 ORTHO05D008108 6.4e-07 58.2 59 54.2
Potri.006G008000 Populus trichocarpa HOM05D006473 ORTHO05D008108 6.4e-07 58.2 35 74.3
Sabra06G0006200 Salix brachista HOM05D006473 ORTHO05D008108 6.4e-07 58.2 35 74.3
COL.COLO4_19989 Corchorus olitorius HOM05D006473 ORTHO05D008108 8.3e-07 57.8 35 71.4
MELO3C026363.2 Cucumis melo HOM05D006473 ORTHO05D008108 8.3e-07 57.8 91 41.8
FvH4_6g39300 Fragaria vesca HOM05D006473 ORTHO05D008108 8.3e-07 57.8 35 71.4
Glyma.13G004200 Glycine max HOM05D006473 ORTHO05D008108 8.3e-07 57.8 130 33.1
Gohir.A11G155300 Gossypium hirsutum HOM05D006473 ORTHO05D008108 8.3e-07 57.8 44 61.4
Gohir.D11G162300 Gossypium hirsutum HOM05D006473 ORTHO05D008108 8.3e-07 57.8 44 61.4
Gorai.007G172600 Gossypium raimondii HOM05D006473 ORTHO05D008108 8.3e-07 57.8 44 61.4
Manes.08G068100 Manihot esculenta HOM05D006473 ORTHO05D008108 8.3e-07 57.8 35 71.4
Zm00001eb078060 Zea mays HOM05D006473 ORTHO05D008108 8.3e-07 57.8 119 37.8
Actinidia32074 Actinidia chinensis HOM05D006473 ORTHO05D008108 1.1e-06 57.4 35 74.3
EL10Ac6g15336 Beta vulgaris HOM05D006473 ORTHO05D008108 1.1e-06 57.4 112 41.1
CARHR221880 Cardamine hirsuta HOM05D006473 ORTHO05D008108 1.1e-06 57.4 45 62.2
Lalb_Chr17g0337141 Lupinus albus HOM05D006473 ORTHO05D008108 1.1e-06 57.4 35 71.4
Sed0027280 Sechium edule HOM05D006473 ORTHO05D008108 1.1e-06 57.4 144 35.4
TAR626G1015 Trochodendron aralioides HOM05D006473 ORTHO05D008108 1.1e-06 57.4 124 33.9
Thhalv10027487m.g Eutrema salsugineum HOM05D006473 ORTHO05D008108 1.4e-06 57.0 45 62.2
MBI02_g01129_MAGBIO Magnolia biondii HOM05D006464 ORTHO05D007923 1.4e-06 57.0 34 73.5
AT4G15140 Arabidopsis thaliana HOM05D006473 ORTHO05D008108 1.9e-06 56.6 45 62.2
Carub.0007s2685 Capsella rubella HOM05D006473 ORTHO05D008108 1.9e-06 56.6 45 62.2
Lj6g0005292 Lotus japonicus HOM05D006473 ORTHO05D008108 1.9e-06 56.6 125 35.2
MD09G1143500 Malus domestica HOM05D006473 ORTHO05D008108 2.4e-06 56.2 120 37.5
Os04g0504200 Oryza sativa ssp. japonica HOM05D006473 ORTHO05D008108 2.4e-06 56.2 43 60.5
Actinidia12507 Actinidia chinensis HOM05D006473 ORTHO05D008108 3.2e-06 55.8 35 71.4
CiPaw.04G072200 Carya illinoinensis HOM05D006473 ORTHO05D008108 3.2e-06 55.8 152 32.2
Haze_13544 Corylus avellana HOM05D006473 ORTHO05D008108 3.2e-06 55.8 134 35.1
Duzib138G0874 Durio zibethinus HOM05D006473 ORTHO05D008108 3.2e-06 55.8 92 42.4
AL7G40560 Arabidopsis lyrata HOM05D006473 ORTHO05D008108 4.1e-06 55.5 45 60.0
COL.COLO4_18222 Corchorus olitorius HOM05D006473 ORTHO05D008108 4.1e-06 55.5 35 68.6
TPR.G17559 Trifolium pratense HOM05D006473 ORTHO05D008108 4.1e-06 55.5 108 36.1
vmacro08765 Vaccinium macrocarpon HOM05D006473 ORTHO05D008108 4.1e-06 55.5 159 30.8
BraA05t20604Z Brassica rapa HOM05D006473 ORTHO05D008108 5.4e-06 55.1 45 57.8
Psat5g106240 Pisum sativum HOM05D006473 ORTHO05D008108 5.4e-06 55.1 150 32.7
Aa31LG9G2250 Aethionema arabicum HOM05D006473 ORTHO05D008108 7.0e-06 54.7 45 57.8
Nitab4.5_0011512g0010 Nicotiana tabacum HOM05D006473 ORTHO05D008108 7.0e-06 54.7 130 32.3
Cfa023365 Carpinus fangiana HOM05D006473 ORTHO05D008108 9.2e-06 54.3 134 34.3
Medtr3g082070 Medicago truncatula HOM05D006473 ORTHO05D008108 9.2e-06 54.3 100 36.0
Hund23023 Selenicereus undatus HOM05D006473 ORTHO05D008108 9.2e-06 54.3 92 38.0


User provided reference genes

Program Settings