Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_61.g26464 Utricularia gibba HOM05D004257 ORTHO05D005202 6.4e-171 604.0 301 100.0
SGA_v2.0_scaffold90G27780 Striga asiatica HOM05D004257 ORTHO05D005202 5.6e-135 484.6 345 73.0
Migut.O00233 Erythranthe guttata HOM05D004257 ORTHO05D005202 7.4e-135 484.2 347 72.6
unitig_0.g1405 Utricularia gibba HOM05D004257 ORTHO05D005202 1.3e-134 483.4 324 78.7
Nitab4.5_0004454g0010 Nicotiana tabacum HOM05D004257 ORTHO05D005202 1.5e-132 476.5 344 71.2
MSTRG.23192 Avicennia marina HOM05D004257 ORTHO05D005202 7.6e-132 474.2 345 71.6
Dinv06012 Davidia involucrata HOM05D004257 ORTHO05D005202 4.2e-130 468.4 344 71.5
CSS0006901 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 7.1e-130 467.6 340 70.3
CSS0016221 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 7.1e-130 467.6 340 70.3
Sopen03g028840 Solanum pennellii HOM05D004257 ORTHO05D005202 7.1e-130 467.6 344 69.8
Solyc03g098140.3 Solanum lycopersicum HOM05D004257 ORTHO05D005202 1.2e-129 466.8 344 69.8
CAN.G637.23 Capsicum annuum HOM05D004257 ORTHO05D005202 1.6e-129 466.5 344 70.6
PGSC0003DMG402031052 Solanum tuberosum HOM05D004257 ORTHO05D005202 4.6e-129 464.9 344 70.3
MSTRG.11529 Avicennia marina HOM05D004257 ORTHO05D005202 1.3e-128 463.4 338 70.7
Peaxi162Scf00171g00722 Petunia axillaris HOM05D004257 ORTHO05D005202 6.7e-128 461.1 331 71.9
Hma1.2p1_0075F.1_g039210 Hydrangea macrophylla HOM05D004257 ORTHO05D005202 1.5e-127 459.9 323 72.8
CSS0049630 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 1.9e-127 459.5 333 71.5
Nn3g19680 Nelumbo nucifera HOM05D004257 ORTHO05D005202 2.5e-127 459.1 344 69.5
Oeu023635.1 Olea europaea HOM05D004257 ORTHO05D005202 2.5e-127 459.1 318 74.2
Manes.12G033300 Manihot esculenta HOM05D004257 ORTHO05D005202 3.3e-127 458.8 325 71.7
Potri.002G037400 Populus trichocarpa HOM05D004257 ORTHO05D005202 3.3e-127 458.8 340 70.0
Sabra02G0030200 Salix brachista HOM05D004257 ORTHO05D005202 1.3e-126 456.8 324 71.9
TAR365G0817 Trochodendron aralioides HOM05D004257 ORTHO05D005202 1.6e-126 456.4 344 69.2
Aqoxy2G03662 Aquilegia oxysepala HOM05D004257 ORTHO05D005202 2.8e-126 455.7 344 68.9
Aqoxy5G00217 Aquilegia oxysepala HOM05D004257 ORTHO05D005202 2.8e-126 455.7 344 70.1
Nitab4.5_0000936g0060 Nicotiana tabacum HOM05D004257 ORTHO05D005202 4.8e-126 454.9 330 70.9
Potri.005G225700 Populus trichocarpa HOM05D004257 ORTHO05D005202 8.2e-126 454.1 324 71.9
Cc04_g09710 Coffea canephora HOM05D004257 ORTHO05D005202 2.4e-125 452.6 330 70.3
CSS0001153 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 6.9e-125 451.1 329 72.0
vmacro10363 Vaccinium macrocarpon HOM05D004257 ORTHO05D005202 9.0e-125 450.7 355 67.9
RcHm_v2.0_Chr6g0287891 Rosa chinensis HOM05D004257 ORTHO05D005202 1.2e-124 450.3 328 70.1
COL.COLO4_04031 Corchorus olitorius HOM05D004257 ORTHO05D005202 1.5e-124 449.9 345 68.1
DCAR_010071 Daucus carota HOM05D004257 ORTHO05D005202 1.5e-124 449.9 323 71.2
PSO832G0932 Papaver somniferum HOM05D004257 ORTHO05D005202 1.5e-124 449.9 335 69.9
Thecc.01G256600 Theobroma cacao HOM05D004257 ORTHO05D005202 1.5e-124 449.9 330 69.7
Duzib133G1463 Durio zibethinus HOM05D004257 ORTHO05D005202 2.6e-124 449.1 330 69.7
PSO210G0560 Papaver somniferum HOM05D004257 ORTHO05D005202 3.4e-124 448.7 335 69.6
Hund06906 Selenicereus undatus HOM05D004257 ORTHO05D005202 5.8e-124 448.0 344 67.7
ClCG07G001120 Citrullus lanatus HOM05D004257 ORTHO05D005202 1.0e-123 447.2 333 68.5
FvH4_2g21300 Fragaria vesca HOM05D004257 ORTHO05D005202 1.3e-123 446.8 327 70.3
FAN24G1061 Fragaria x ananassa HOM05D004257 ORTHO05D005202 1.3e-123 446.8 327 70.3
Lj5A229T68 Lonicera japonica HOM05D004257 ORTHO05D005202 1.3e-123 446.8 344 68.6
CiPaw.04G187400 Carya illinoinensis HOM05D004257 ORTHO05D005202 1.7e-123 446.4 331 68.3
Duzib138G0002 Durio zibethinus HOM05D004257 ORTHO05D005202 1.7e-123 446.4 330 69.7
QL09p039362 Quercus lobata HOM05D004257 ORTHO05D005202 1.7e-123 446.4 343 67.1
TAR362G0002 Trochodendron aralioides HOM05D004257 ORTHO05D005202 2.2e-123 446.0 344 68.9
FAN20G1479 Fragaria x ananassa HOM05D004257 ORTHO05D005202 2.9e-123 445.7 327 70.0
CANSAT01G0143 Cannabis sativa HOM05D004257 ORTHO05D005202 4.9e-123 444.9 345 66.1
CsaV3_3G022160 Cucumis sativus L. HOM05D004257 ORTHO05D005202 4.9e-123 444.9 335 68.1
FAN27G2888 Fragaria x ananassa HOM05D004257 ORTHO05D005202 4.9e-123 444.9 327 70.0
Gorai.001G178500 Gossypium raimondii HOM05D004257 ORTHO05D005202 6.5e-123 444.5 330 68.8
Gorai.007G147100 Gossypium raimondii HOM05D004257 ORTHO05D005202 6.5e-123 444.5 347 68.6
Actinidia38939 Actinidia chinensis HOM05D004257 ORTHO05D005202 1.9e-122 443.0 323 69.7
Gohir.D07G155600 Gossypium hirsutum HOM05D004257 ORTHO05D005202 1.9e-122 443.0 330 68.5
Gohir.D11G137300 Gossypium hirsutum HOM05D004257 ORTHO05D005202 1.9e-122 443.0 347 68.3
GSVIVG01028350001 Vitis vinifera HOM05D004257 ORTHO05D005202 2.5e-122 442.6 290 74.8
CANSAT35G1745 Cannabis sativa HOM05D004257 ORTHO05D005202 4.2e-122 441.8 327 68.5
Cfa002439 Carpinus fangiana HOM05D004257 ORTHO05D005202 7.1e-122 441.0 344 66.9
FAN15G2746 Fragaria x ananassa HOM05D004257 ORTHO05D005202 9.3e-122 440.7 323 70.3
TWI18G0956 Tripterygium wilfordii HOM05D004257 ORTHO05D005202 1.2e-121 440.3 332 68.1
PSO675G6112 Papaver somniferum HOM05D004257 ORTHO05D005202 1.6e-121 439.9 335 68.1
PSO675G8755 Papaver somniferum HOM05D004257 ORTHO05D005202 1.6e-121 439.9 335 68.1
Sed0007154 Sechium edule HOM05D004257 ORTHO05D005202 1.6e-121 439.9 342 66.1
Ciclev10021043m.g Citrus clementina HOM05D004257 ORTHO05D005202 2.1e-121 439.5 344 66.3
Gohir.A07G149400 Gossypium hirsutum HOM05D004257 ORTHO05D005202 2.7e-121 439.1 330 67.9
Sed0014699 Sechium edule HOM05D004257 ORTHO05D005202 3.5e-121 438.7 353 66.3
MELO3C012874.2 Cucumis melo HOM05D004257 ORTHO05D005202 4.6e-121 438.3 328 68.9
Gohir.A11G131450 Gossypium hirsutum HOM05D004257 ORTHO05D005202 4.6e-121 438.3 343 67.6
Ah.04g163130 Amaranthus hybridus HOM05D004257 ORTHO05D005202 1.0e-120 437.2 346 66.2
PSO675G8702 Papaver somniferum HOM05D004257 ORTHO05D005202 1.0e-120 437.2 335 67.8
Atru.chr5.1712 Acer truncatum HOM05D004257 ORTHO05D005202 1.8e-120 436.4 325 67.7
DCAR_014267 Daucus carota HOM05D004257 ORTHO05D005202 6.7e-120 434.5 323 69.0
PGR044G0150 Punica granatum HOM05D004257 ORTHO05D005202 6.7e-120 434.5 350 66.9
MBI07_g16916_MAGBIO Magnolia biondii HOM05D004257 ORTHO05D005202 8.7e-120 434.1 318 71.4
Eucgr.K03257 Eucalyptus grandis HOM05D004257 ORTHO05D005202 4.3e-119 431.8 351 67.2
AUR62004833 Chenopodium quinoa HOM05D004257 ORTHO05D005202 7.4e-119 431.0 342 65.5
AUR62040921 Chenopodium quinoa HOM05D004257 ORTHO05D005202 9.7e-119 430.6 328 67.1
Prupe.8G222200 Prunus persica HOM05D004257 ORTHO05D005202 9.7e-119 430.6 326 68.4
TWI12G0832 Tripterygium wilfordii HOM05D004257 ORTHO05D005202 3.7e-118 428.7 332 66.6
MD10G1182800 Malus domestica HOM05D004257 ORTHO05D005202 6.3e-118 427.9 326 68.4
THA.LOC104825258 Tarenaya hassleriana HOM05D004257 ORTHO05D005202 1.1e-117 427.2 318 68.2
MD05G1195500 Malus domestica HOM05D004257 ORTHO05D005202 3.1e-117 425.6 326 67.8
AL5G35770 Arabidopsis lyrata HOM05D004257 ORTHO05D005202 4.1e-117 425.2 351 64.1
HanXRQChr17g0542071 Helianthus annuus HOM05D004257 ORTHO05D005202 5.3e-117 424.9 344 65.4
CiPaw.03G265600 Carya illinoinensis HOM05D004257 ORTHO05D005202 1.2e-116 423.7 343 64.4
Haze_24645 Corylus avellana HOM05D004257 ORTHO05D005202 1.2e-116 423.7 376 61.4
Thhalv10010498m.g Eutrema salsugineum HOM05D004257 ORTHO05D005202 1.5e-116 423.3 319 68.3
Aa31sc35G30 Aethionema arabicum HOM05D004257 ORTHO05D005202 2.0e-116 422.9 330 66.1
arahy.Tifrunner.gnm1.ann1.63G7RJ Arachis hypogaea HOM05D004257 ORTHO05D005202 2.0e-116 422.9 323 69.0
AT3G54690 Arabidopsis thaliana HOM05D004257 ORTHO05D005202 2.6e-116 422.5 327 66.7
Lalb_Chr01g0019631 Lupinus albus HOM05D004257 ORTHO05D005202 2.6e-116 422.5 344 64.8
CARHR164610 Cardamine hirsuta HOM05D004257 ORTHO05D005202 3.4e-116 422.2 319 68.3
Medtr7g097060 Medicago truncatula HOM05D004257 ORTHO05D005202 3.4e-116 422.2 344 64.8
Psat3g056800 Pisum sativum HOM05D004257 ORTHO05D005202 4.5e-116 421.8 323 66.6
A04p05160 Brassica napus HOM05D004257 ORTHO05D005202 1.7e-115 419.9 327 66.1
BraA04t16226Z Brassica rapa HOM05D004257 ORTHO05D005202 1.7e-115 419.9 327 66.1
Cpa.g.sc473.3 Carica papaya HOM05D004257 ORTHO05D005202 1.7e-115 419.9 312 68.3
BcaC08g44693 Brassica carinata HOM05D004257 ORTHO05D005202 2.9e-115 419.1 324 66.0
C06p22290 Brassica napus HOM05D004257 ORTHO05D005202 2.9e-115 419.1 324 66.0
Ca_08681_v3 Cicer arietinum L. HOM05D004257 ORTHO05D005202 2.9e-115 419.1 323 65.9
BcaC02g09050 Brassica carinata HOM05D004257 ORTHO05D005202 3.8e-115 418.7 319 67.4
C04p37820 Brassica napus HOM05D004257 ORTHO05D005202 3.8e-115 418.7 319 67.4
BolC4t25358H Brassica oleracea HOM05D004257 ORTHO05D005202 3.8e-115 418.7 319 67.4
BcaB02g07726 Brassica carinata HOM05D004257 ORTHO05D005202 5.0e-115 418.3 324 66.0
Carub.0005s2129 Capsella rubella HOM05D004257 ORTHO05D005202 1.1e-114 417.2 319 67.1
VMungo1383G3387 Vigna mungo HOM05D004257 ORTHO05D005202 1.1e-114 417.2 346 62.1
BolC6t37415H Brassica oleracea HOM05D004257 ORTHO05D005202 1.9e-114 416.4 324 65.7
Sc09g0004250 Simmondsia chinensis HOM05D004257 ORTHO05D005202 1.9e-114 416.4 341 63.9
Lj1g0005279 Lotus japonicus HOM05D004257 ORTHO05D005202 3.2e-114 415.6 323 65.9
Lsat_1_v5_gn_3_39581 Lactuca sativa HOM05D004257 ORTHO05D005202 5.5e-114 414.8 331 65.6
Sp5g07760 Schrenkiella parvula HOM05D004257 ORTHO05D005202 7.2e-114 414.5 319 67.1
Glyma.19G165400 Glycine max HOM05D004257 ORTHO05D005202 3.6e-113 412.1 350 62.0
arahy.Tifrunner.gnm1.ann1.BG7UA0 Arachis hypogaea HOM05D004257 ORTHO05D005202 4.6e-113 411.8 344 64.8
Phvul.001G161500 Phaseolus vulgaris HOM05D004257 ORTHO05D005202 7.9e-113 411.0 335 63.3
CSS0045427 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 5.7e-111 404.8 345 63.8
HPP92_017366 Vanilla planifolia HOM05D004257 ORTHO05D005202 4.8e-110 401.7 345 61.4
SalBow5G3197 Salvia bowleyana HOM05D004257 ORTHO05D005202 1.7e-107 393.3 292 69.2
SalBow5G4297 Salvia bowleyana HOM05D004257 ORTHO05D005202 1.7e-107 393.3 292 69.2
ATR0736G010 Amborella trichopoda HOM05D004257 ORTHO05D005202 5.0e-107 391.7 323 63.5
TPR.G7131 Trifolium pratense HOM05D004257 ORTHO05D005202 1.6e-105 386.7 364 57.7
HPP92_010358 Vanilla planifolia HOM05D004257 ORTHO05D005202 3.6e-105 385.6 345 59.7
CDE04G1210 Ceratophyllum demersum HOM05D004257 ORTHO05D005202 4.7e-105 385.2 302 66.6
Zm00001eb207770 Zea mays HOM05D004257 ORTHO05D005202 1.4e-104 383.6 348 58.3
Zm00001eb232580 Zea mays HOM05D004257 ORTHO05D005202 8.8e-104 380.9 348 57.2
BraA07t29902Z Brassica rapa HOM05D004257 ORTHO05D005202 2.0e-103 379.8 324 62.7
CDE02G1046 Ceratophyllum demersum HOM05D004257 ORTHO05D005202 1.7e-102 376.7 314 64.6
Mapoly0023s0132 Marchantia polymorpha HOM05D004257 ORTHO05D005202 1.7e-102 376.7 341 56.9
Os02g0158300 Oryza sativa ssp. japonica HOM05D004257 ORTHO05D005202 1.7e-102 376.7 348 57.5
BcaC05g28242 Brassica carinata HOM05D004257 ORTHO05D005202 3.1e-101 372.5 347 58.8
BolC5t33007H Brassica oleracea HOM05D004257 ORTHO05D005202 3.1e-101 372.5 347 58.8
ECA246G4101 Erigeron canadensis HOM05D004257 ORTHO05D005202 2.6e-100 369.4 228 78.9
AagrBONN_evm.TU.Sc2ySwM_344.1200 Anthoceros agrestis HOM05D004257 ORTHO05D005202 5.0e-99 365.2 330 57.9
AagrBONN_evm.TU.Sc2ySwM_344.3818 Anthoceros agrestis HOM05D004257 ORTHO05D005202 1.9e-98 363.2 325 59.1
CDE02G2420 Ceratophyllum demersum HOM05D004257 ORTHO05D005202 5.2e-96 355.1 230 75.2
SMO367G0216 Selaginella moellendorffii HOM05D004257 ORTHO05D005202 1.1e-93 347.4 315 57.1
BcaB02g08451 Brassica carinata HOM05D004257 ORTHO05D005202 3.8e-91 339.0 211 78.7
Pp3c23_13620 Physcomitrium patens HOM05D004257 ORTHO05D005202 2.1e-89 333.2 318 54.7
Pp3c5_14840 Physcomitrium patens HOM05D004257 ORTHO05D005202 2.3e-88 329.7 322 54.3
CBR_g20340 Chara braunii HOM05D004257 ORTHO05D005202 1.3e-86 323.9 327 53.2
EL10Ac4g09002 Beta vulgaris HOM05D004257 ORTHO05D005202 6.3e-86 321.6 274 61.3
CAN.G65.83 Capsicum annuum HOM05D004257 ORTHO05D005202 1.7e-75 287.0 245 62.4
SGA_v2.0_scaffold25G10776 Striga asiatica HOM05D004257 ORTHO05D005202 2.6e-71 273.1 185 76.8
C05p42800 Brassica napus HOM05D004257 ORTHO05D005202 2.8e-70 269.6 255 55.7
Pp3c24_11040 Physcomitrium patens HOM05D004257 ORTHO05D005202 4.0e-64 249.2 298 48.0
AagrBONN_evm.TU.Sc2ySwM_228.5393 Anthoceros agrestis HOM05D004257 ORTHO05D005202 1.1e-56 224.6 165 65.5
PSO470G0001 Papaver somniferum HOM05D004257 ORTHO05D005202 1.5e-55 220.7 202 58.9
A07p22230 Brassica napus HOM05D004257 ORTHO05D005202 1.3e-54 217.6 131 81.7
Oeu036414.1 Olea europaea HOM05D004257 ORTHO05D005202 7.0e-53 211.8 123 83.7
Actinidia34751 Actinidia chinensis HOM05D000378 ORTHO05D005202 1.1e-50 204.5 119 79.8
SEGI_04972 Sequoiadendron giganteum HOM05D004257 ORTHO05D005202 5.6e-50 202.2 122 78.7
SEGI_22917 Sequoiadendron giganteum HOM05D004257 ORTHO05D005202 1.9e-45 187.2 189 50.8
SEGI_29481 Sequoiadendron giganteum HOM05D004257 ORTHO05D005202 1.9e-45 187.2 189 50.8
BcaC07g39794 Brassica carinata HOM05D004257 ORTHO05D005202 6.0e-44 182.2 164 60.4
BolC8t50595H Brassica oleracea HOM05D004257 ORTHO05D005202 3.9e-43 179.5 164 61.0
C08p29840 Brassica napus HOM05D004257 ORTHO05D005202 4.3e-42 176.0 164 61.0
Peaxi162Scf00643g00656 Petunia axillaris HOM05D004257 ORTHO05D005202 1.7e-27 127.5 118 61.9
Rhsim05G0133300 Rhododendron simsii HOM05D004257 ORTHO05D005202 1.1e-26 124.8 92 70.7
Lsat_1_v5_gn_8_28701 Lactuca sativa HOM05D004257 ORTHO05D005202 2.8e-25 120.2 92 68.5
EL10Ac4g09003 Beta vulgaris HOM05D004257 ORTHO05D005202 9.0e-24 115.2 70 80.0
Lj6g0021985 Lotus japonicus HOM05D004257 ORTHO05D236371 1.6e-20 104.4 78 66.7
Rhsim08G0010200 Rhododendron simsii HOM05D000535 ORTHO05D000427 8.7e-19 98.6 71 69.0
AagrBONN_evm.TU.Sc2ySwM_228.5394 Anthoceros agrestis HOM05D004257 ORTHO05D005202 7.6e-15 85.5 127 40.9
BcaB01g01067 Brassica carinata HOM05D004257 ORTHO05D092693 1.3e-14 84.7 78 56.4
Rhsim04G0042100 Rhododendron simsii HOM05D004257 ORTHO05D005202 1.3e-14 84.7 51 78.4
Aqoxy1G04111 Aquilegia oxysepala HOM05D004257 ORTHO05D004515 3.9e-11 73.2 164 34.1
Lsat_1_v5_gn_6_26721 Lactuca sativa HOM05D004257 ORTHO05D230427 4.0e-08 63.2 42 73.8
RhsimUnG0176200 Rhododendron simsii HOM05D000026 ORTHO05D000127 5.3e-08 62.8 48 66.7
CDE04G3164 Ceratophyllum demersum HOM05D004257 ORTHO05D130150 1.5e-07 61.2 36 69.4


User provided reference genes

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