Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_578.g16405 Utricularia gibba HOM05D007531 ORTHO05D009484 2.0e-80 302.4 154 100.0
SGA_v2.0_scaffold296G47570 Striga asiatica HOM05D007531 ORTHO05D009484 9.3e-25 117.5 111 61.3
MSTRG.19432 Avicennia marina HOM05D007531 ORTHO05D009484 1.2e-24 117.1 106 63.2
Migut.L01591 Erythranthe guttata HOM05D007531 ORTHO05D009484 6.0e-24 114.8 110 60.9
SalBow6G4078 Salvia bowleyana HOM05D007531 ORTHO05D009484 1.1e-22 110.5 109 58.7
Oeu028116.1 Olea europaea HOM05D007531 ORTHO05D009484 3.6e-21 105.5 105 56.2
PGSC0003DMG400013576 Solanum tuberosum HOM05D007531 ORTHO05D009484 1.1e-17 94.0 101 54.5
Nitab4.5_0001092g0060 Nicotiana tabacum HOM05D007531 ORTHO05D009484 1.2e-16 90.5 103 51.5
Nitab4.5_0001699g0060 Nicotiana tabacum HOM05D007531 ORTHO05D009484 7.9e-16 87.8 101 51.5
Sopen07g022090 Solanum pennellii HOM05D007531 ORTHO05D009484 2.3e-15 86.3 101 52.5
Nitab4.5_0007540g0040 Nicotiana tabacum HOM05D007531 ORTHO05D009484 3.0e-15 85.9 101 51.5
CAN.G660.22 Capsicum annuum HOM05D007531 ORTHO05D009484 5.1e-15 85.1 103 54.4
Peaxi162Scf00191g01018 Petunia axillaris HOM05D007531 ORTHO05D009484 6.6e-15 84.7 101 50.5
Solyc07g042450.3 Solanum lycopersicum HOM05D007531 ORTHO05D009484 6.6e-15 84.7 101 51.5
GSVIVG01015026001 Vitis vinifera HOM05D007531 ORTHO05D009484 8.7e-15 84.3 81 56.8
Cpa.g.sc82.75 Carica papaya HOM05D007531 ORTHO05D009484 2.5e-14 82.8 103 46.6
EL10Ac8g18992 Beta vulgaris HOM05D007531 ORTHO05D009484 3.3e-14 82.4 103 49.5
PGR042G0735 Punica granatum HOM05D007531 ORTHO05D009484 3.3e-14 82.4 105 46.7
Potri.006G137401 Populus trichocarpa HOM05D007531 ORTHO05D009484 5.6e-14 81.6 93 53.8
TWI63G1700 Tripterygium wilfordii HOM05D007531 ORTHO05D009484 5.6e-14 81.6 58 65.5
Atru.chr7.1757 Acer truncatum HOM05D007531 ORTHO05D009484 7.3e-14 81.3 58 60.3
Carub.0001s1884 Capsella rubella HOM05D007531 ORTHO05D009484 9.6e-14 80.9 105 44.8
Cc06_g12620 Coffea canephora HOM05D007531 ORTHO05D009484 9.6e-14 80.9 112 45.5
Sc14g0000480 Simmondsia chinensis HOM05D007531 ORTHO05D009484 1.6e-13 80.1 92 48.9
Aa31LG7G3950 Aethionema arabicum HOM05D007531 ORTHO05D009484 2.1e-13 79.7 106 45.3
AL1G31820 Arabidopsis lyrata HOM05D007531 ORTHO05D009484 2.1e-13 79.7 107 45.8
Lsat_1_v5_gn_7_35440 Lactuca sativa HOM05D007531 ORTHO05D009484 2.8e-13 79.3 104 49.0
Sp1g17150 Schrenkiella parvula HOM05D007531 ORTHO05D009484 3.6e-13 79.0 100 45.0
AT1G19240 Arabidopsis thaliana HOM05D007531 ORTHO05D009484 6.2e-13 78.2 107 44.9
CSS0023587 Camellia sinensis var. sinensis HOM05D007531 ORTHO05D009484 1.1e-12 77.4 73 54.8
Ciclev10010006m.g Citrus clementina HOM05D007531 ORTHO05D009484 1.4e-12 77.0 64 59.4
DCAR_010491 Daucus carota HOM05D007531 ORTHO05D009484 1.4e-12 77.0 57 64.9
Duzib168G1872 Durio zibethinus HOM05D007531 ORTHO05D009484 1.4e-12 77.0 71 57.7
Thhalv10009175m.g Eutrema salsugineum HOM05D007531 ORTHO05D009484 1.4e-12 77.0 109 44.0
THA.LOC104809045 Tarenaya hassleriana HOM05D007531 ORTHO05D009484 1.4e-12 77.0 107 45.8
Thecc.09G071300 Theobroma cacao HOM05D007531 ORTHO05D009484 1.8e-12 76.6 57 61.4
Dinv42427 Davidia involucrata HOM05D007531 ORTHO05D009484 2.4e-12 76.3 103 44.7
Actinidia39623 Actinidia chinensis HOM05D007531 ORTHO05D009484 4.0e-12 75.5 103 43.7
BcaB07g31940 Brassica carinata HOM05D007531 ORTHO05D009484 4.0e-12 75.5 100 42.0
BcaC07g38992 Brassica carinata HOM05D007531 ORTHO05D009484 4.0e-12 75.5 100 42.0
ECA246G1013 Erigeron canadensis HOM05D007531 ORTHO05D009484 4.0e-12 75.5 72 52.8
Rhsim05G0002900 Rhododendron simsii HOM05D007531 ORTHO05D009484 5.3e-12 75.1 103 42.7
ClCG11G000070 Citrullus lanatus HOM05D007531 ORTHO05D009484 6.9e-12 74.7 84 52.4
Gohir.D08G267900 Gossypium hirsutum HOM05D007531 ORTHO05D009484 6.9e-12 74.7 57 61.4
Gorai.004G285500 Gossypium raimondii HOM05D007531 ORTHO05D009484 6.9e-12 74.7 57 61.4
Manes.16G092000 Manihot esculenta HOM05D007531 ORTHO05D009484 6.9e-12 74.7 103 45.6
CDE06G0851 Ceratophyllum demersum HOM05D007531 ORTHO05D009484 9.0e-12 74.3 77 51.9
Aqoxy7G04136 Aquilegia oxysepala HOM05D007531 ORTHO05D009484 1.2e-11 73.9 76 51.3
C05p17640 Brassica napus HOM05D007531 ORTHO05D009484 1.5e-11 73.6 57 59.6
Gohir.A08G246700 Gossypium hirsutum HOM05D007531 ORTHO05D009484 1.5e-11 73.6 57 61.4
arahy.Tifrunner.gnm1.ann1.ETL5CI Arachis hypogaea HOM05D007531 ORTHO05D009484 2.0e-11 73.2 55 61.8
Eucgr.H05011 Eucalyptus grandis HOM05D007531 ORTHO05D009484 2.0e-11 73.2 66 57.6
MD15G1222700 Malus domestica HOM05D007531 ORTHO05D009484 2.0e-11 73.2 103 41.7
Sabra06G0107500 Salix brachista HOM05D007531 ORTHO05D009484 2.0e-11 73.2 46 76.1
A06p15390 Brassica napus HOM05D007531 ORTHO05D009484 3.4e-11 72.4 57 57.9
BraA06t24652Z Brassica rapa HOM05D007531 ORTHO05D009484 3.4e-11 72.4 57 57.9
Hma1.2p1_0519F.1_g171380 Hydrangea macrophylla HOM05D007531 ORTHO05D009484 3.4e-11 72.4 55 60.0
Prupe.7G193100 Prunus persica HOM05D007531 ORTHO05D009484 3.4e-11 72.4 108 45.4
arahy.Tifrunner.gnm1.ann1.J82KAY Arachis hypogaea HOM05D007531 ORTHO05D009484 5.8e-11 71.6 69 55.1
Duzib150G1567 Durio zibethinus HOM05D007531 ORTHO05D009484 5.8e-11 71.6 82 51.2
COL.COLO4_21218 Corchorus olitorius HOM05D007531 ORTHO05D009484 1.3e-10 70.5 101 42.6
CsaV3_5G027570 Cucumis sativus L. HOM05D007531 ORTHO05D009484 1.7e-10 70.1 82 50.0
Manes.03G043400 Manihot esculenta HOM05D007531 ORTHO05D009484 2.2e-10 69.7 104 43.3
BolC5t30467H Brassica oleracea HOM05D007531 ORTHO05D009484 2.9e-10 69.3 107 39.3
CANSAT56G3767 Cannabis sativa HOM05D007531 ORTHO05D009484 2.9e-10 69.3 78 47.4
CARHR019840 Cardamine hirsuta HOM05D007531 ORTHO05D009484 2.9e-10 69.3 43 72.1
Cfa002948 Carpinus fangiana HOM05D007531 ORTHO05D009484 2.9e-10 69.3 58 56.9
FAN26G1659 Fragaria x ananassa HOM05D007531 ORTHO05D009484 2.9e-10 69.3 106 39.6
FAN26G1806 Fragaria x ananassa HOM05D007531 ORTHO05D009484 2.9e-10 69.3 106 39.6
FAN23G0531 Fragaria x ananassa HOM05D007531 ORTHO05D009484 3.8e-10 68.9 107 39.3
TAR626G0337 Trochodendron aralioides HOM05D007531 ORTHO05D009484 3.8e-10 68.9 79 44.3
RcHm_v2.0_Chr2g0095821 Rosa chinensis HOM05D007531 ORTHO05D009484 4.9e-10 68.6 107 40.2
FvH4_1g09260 Fragaria vesca HOM05D007531 ORTHO05D009484 8.4e-10 67.8 105 38.1
FAN19G1112 Fragaria x ananassa HOM05D007531 ORTHO05D009484 8.4e-10 67.8 105 38.1
Dinv25515 Davidia involucrata HOM05D007531 ORTHO05D009484 1.4e-09 67.0 66 53.0
Sed0019513 Sechium edule HOM05D007531 ORTHO05D009484 1.4e-09 67.0 46 67.4
Psat0s2373g0160 Pisum sativum HOM05D007531 ORTHO05D009484 3.2e-09 65.9 59 52.5
Phvul.004G046500 Phaseolus vulgaris HOM05D007531 ORTHO05D009484 1.6e-08 63.5 55 52.7
vmacro17085 Vaccinium macrocarpon HOM05D007531 ORTHO05D009484 1.6e-08 63.5 46 60.9
FAN28G0689 Fragaria x ananassa HOM05D007531 ORTHO05D009484 2.1e-08 63.2 107 38.3
MBI19_g38003_MAGBIO Magnolia biondii HOM05D007531 ORTHO05D009484 2.1e-08 63.2 77 41.6
HPP92_021129 Vanilla planifolia HOM05D007531 ORTHO05D009484 3.5e-08 62.4 77 42.9
HPP92_021130 Vanilla planifolia HOM05D007531 ORTHO05D009484 3.5e-08 62.4 77 42.9
QL11p002692 Quercus lobata HOM05D007531 ORTHO05D009484 4.6e-08 62.0 102 41.2
Lj4g0024105 Lotus japonicus HOM05D007531 ORTHO05D009484 7.9e-08 61.2 69 46.4
TPR.G12718 Trifolium pratense HOM05D007531 ORTHO05D009484 1.8e-07 60.1 53 52.8
Glyma.17G046400 Glycine max HOM05D007531 ORTHO05D009484 3.0e-07 59.3 48 56.2
Phvul.003G128000 Phaseolus vulgaris HOM05D007531 ORTHO05D009484 3.9e-07 58.9 52 51.9
Medtr4g124770 Medicago truncatula HOM05D007531 ORTHO05D009484 6.7e-07 58.2 69 43.5
Lalb_Chr11g0074031 Lupinus albus HOM05D007531 ORTHO05D009484 8.7e-07 57.8 107 36.4
Os01g0144700 Oryza sativa ssp. japonica HOM05D007531 ORTHO05D009484 2.5e-06 56.2 87 34.5
Glyma.13G113300 Glycine max HOM05D007531 ORTHO05D009484 3.3e-06 55.8 48 56.2


User provided reference genes

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