Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_578.g15937 Utricularia gibba HOM05D005253 ORTHO05D006058 3.6e-170 601.7 339 100.0
unitig_8.g4498 Utricularia gibba HOM05D005253 ORTHO05D006058 9.8e-128 460.7 339 78.8
MSTRG.9581 Avicennia marina HOM05D005253 ORTHO05D006058 5.3e-89 332.0 342 60.2
Migut.D01615 Erythranthe guttata HOM05D005253 ORTHO05D006058 1.7e-79 300.4 341 58.4
SalBow7G2030 Salvia bowleyana HOM05D005253 ORTHO05D006058 1.8e-76 290.4 350 52.6
SGA_v2.0_scaffold65G22104 Striga asiatica HOM05D005253 ORTHO05D006058 3.9e-76 289.3 337 53.7
Solyc03g114760.3 Solanum lycopersicum HOM05D005253 ORTHO05D006058 2.8e-66 256.5 337 51.9
Sopen03g033840 Solanum pennellii HOM05D005253 ORTHO05D006058 8.2e-66 255.0 341 52.8
PGSC0003DMG400024524 Solanum tuberosum HOM05D005253 ORTHO05D006058 1.4e-65 254.2 337 51.6
Oeu014427.1 Olea europaea HOM05D005253 ORTHO05D006058 1.8e-65 253.8 329 53.2
Dinv38642 Davidia involucrata HOM05D005253 ORTHO05D006058 1.0e-63 248.1 344 51.5
Haze_18511 Corylus avellana HOM05D005253 ORTHO05D006058 1.7e-63 247.3 352 51.4
Nitab4.5_0002467g0110 Nicotiana tabacum HOM05D005253 ORTHO05D006058 2.9e-63 246.5 344 52.6
Rhsim08G0142100 Rhododendron simsii HOM05D005253 ORTHO05D006058 2.9e-63 246.5 336 47.3
Cfa017731 Carpinus fangiana HOM05D005253 ORTHO05D006058 1.4e-62 244.2 351 51.3
vmacro17641 Vaccinium macrocarpon HOM05D005253 ORTHO05D006058 4.2e-62 242.7 359 44.3
TWI60G1362 Tripterygium wilfordii HOM05D005253 ORTHO05D006058 3.6e-61 239.6 332 49.4
MBI14_g08108_MAGBIO Magnolia biondii HOM05D005253 ORTHO05D006058 7.9e-61 238.4 341 47.8
Duzib068G0534 Durio zibethinus HOM05D005253 ORTHO05D006058 5.1e-60 235.7 335 49.3
GSVIVG01008154001 Vitis vinifera HOM05D005253 ORTHO05D006058 1.5e-59 234.2 341 49.3
Ciclev10020920m.g Citrus clementina HOM05D005253 ORTHO05D006058 4.3e-59 232.6 343 46.4
Nitab4.5_0005994g0050 Nicotiana tabacum HOM05D005253 ORTHO05D006058 4.3e-59 232.6 339 51.0
Gohir.A09G243900 Gossypium hirsutum HOM05D005253 ORTHO05D006058 7.4e-59 231.9 338 46.7
TWI81G0215 Tripterygium wilfordii HOM05D005253 ORTHO05D006058 2.2e-58 230.3 333 48.9
Peaxi162Scf00017g03254 Petunia axillaris HOM05D005253 ORTHO05D006058 6.3e-58 228.8 345 49.3
Gorai.006G268700 Gossypium raimondii HOM05D005253 ORTHO05D006058 8.2e-58 228.4 338 49.4
Lsat_1_v5_gn_5_23380 Lactuca sativa HOM05D005253 ORTHO05D006058 1.1e-57 228.0 348 48.9
Sed0023471 Sechium edule HOM05D005253 ORTHO05D006058 1.8e-57 227.3 346 48.0
Duzib205G1609 Durio zibethinus HOM05D005253 ORTHO05D006058 9.1e-57 224.9 337 44.5
Nitab4.5_0002041g0040 Nicotiana tabacum HOM05D005253 ORTHO05D006058 1.2e-56 224.6 342 48.2
Dinv17459 Davidia involucrata HOM05D005253 ORTHO05D006058 2.0e-56 223.8 320 49.7
Prupe.5G210000 Prunus persica HOM05D005253 ORTHO05D006058 2.6e-56 223.4 336 48.8
Gohir.D07G063700 Gossypium hirsutum HOM05D005253 ORTHO05D006058 5.9e-56 222.2 340 44.1
arahy.Tifrunner.gnm1.ann1.TSF3K2 Arachis hypogaea HOM05D005253 ORTHO05D006058 2.2e-55 220.3 335 47.5
Lj4g0025893 Lotus japonicus HOM05D005253 ORTHO05D006058 5.0e-55 219.2 303 47.5
CSS0036905 Camellia sinensis var. sinensis HOM05D005253 ORTHO05D006058 1.1e-54 218.0 341 47.2
CANSAT80G0823 Cannabis sativa HOM05D005253 ORTHO05D006058 2.5e-54 216.9 343 44.0
Glyma.17G081700 Glycine max HOM05D005253 ORTHO05D006058 2.5e-54 216.9 335 45.4
Gohir.D09G244600 Gossypium hirsutum HOM05D005253 ORTHO05D006058 3.2e-54 216.5 336 43.8
PSO017G7367 Papaver somniferum HOM05D005253 ORTHO05D006058 3.2e-54 216.5 337 43.0
Potri.004G107000 Populus trichocarpa HOM05D005253 ORTHO05D006058 6.1e-53 212.2 340 44.4
arahy.Tifrunner.gnm1.ann1.399KXC Arachis hypogaea HOM05D005253 ORTHO05D006058 7.9e-53 211.8 335 46.6
Glyma.05G018200 Glycine max HOM05D005253 ORTHO05D006058 7.9e-53 211.8 335 45.1
Peaxi162Scf00365g00114 Petunia axillaris HOM05D005253 ORTHO05D006058 7.9e-53 211.8 338 44.1
CAN.G982.39 Capsicum annuum HOM05D005253 ORTHO05D006058 1.4e-52 211.1 420 39.5
MD06G1205700 Malus domestica HOM05D005253 ORTHO05D006058 1.8e-52 210.7 339 47.8
FvH4_5g13401 Fragaria vesca HOM05D005253 ORTHO05D006058 3.0e-52 209.9 331 46.8
MD14G1216600 Malus domestica HOM05D005253 ORTHO05D006058 3.9e-52 209.5 336 47.3
ECA246G0831 Erigeron canadensis HOM05D005253 ORTHO05D006058 8.8e-52 208.4 344 42.7
FAN08G1625 Fragaria x ananassa HOM05D005253 ORTHO05D006058 8.8e-52 208.4 332 47.6
TPR.G1989 Trifolium pratense HOM05D005253 ORTHO05D006058 8.8e-52 208.4 331 43.2
FAN13G1214 Fragaria x ananassa HOM05D005253 ORTHO05D006058 1.5e-51 207.6 331 47.1
Hma1.2p1_0060F.1_g032740 Hydrangea macrophylla HOM05D005253 ORTHO05D006058 1.5e-51 207.6 368 40.5
PSO478G2666 Papaver somniferum HOM05D005253 ORTHO05D006058 2.6e-51 206.8 338 45.3
FAN18G4071 Fragaria x ananassa HOM05D005253 ORTHO05D006058 5.7e-51 205.7 347 45.0
Medtr4g109960 Medicago truncatula HOM05D005253 ORTHO05D006058 3.7e-50 203.0 335 40.0
Cpa.g.sc3.232 Carica papaya HOM05D005253 ORTHO05D006058 6.3e-50 202.2 339 47.5
RcHm_v2.0_Chr7g0183731 Rosa chinensis HOM05D005253 ORTHO05D006058 6.3e-50 202.2 332 48.2
Nn3g17535 Nelumbo nucifera HOM05D005253 ORTHO05D006058 8.2e-50 201.8 338 45.9
TAR371G0033 Trochodendron aralioides HOM05D005253 ORTHO05D006058 1.1e-49 201.4 342 47.1
Lalb_Chr13g0302681 Lupinus albus HOM05D005253 ORTHO05D006058 1.4e-49 201.1 314 46.2
EL10Ac5g11189 Beta vulgaris HOM05D005253 ORTHO05D006058 5.3e-49 199.1 288 50.0
TPR.G2086 Trifolium pratense HOM05D005253 ORTHO05D006058 5.3e-49 199.1 301 42.5
Gorai.001G067300 Gossypium raimondii HOM05D005253 ORTHO05D006058 2.6e-48 196.8 340 40.3
THA.LOC104818357 Tarenaya hassleriana HOM05D005253 ORTHO05D006058 2.6e-48 196.8 335 45.7
Gohir.A07G058832 Gossypium hirsutum HOM05D005253 ORTHO05D006058 7.7e-48 195.3 338 41.7
Manes.06G080800 Manihot esculenta HOM05D005253 ORTHO05D006058 2.2e-47 193.7 335 46.3
AUR62039667 Chenopodium quinoa HOM05D005253 ORTHO05D006058 2.9e-47 193.4 286 50.7
Hund09956 Selenicereus undatus HOM05D005253 ORTHO05D006058 2.9e-47 193.4 322 44.1
VMungo1215G3162 Vigna mungo HOM05D005253 ORTHO05D006058 5.0e-47 192.6 333 44.4
DCAR_010175 Daucus carota HOM05D005253 ORTHO05D006058 8.5e-47 191.8 339 42.2
Phvul.003G182200 Phaseolus vulgaris HOM05D005253 ORTHO05D006058 1.9e-46 190.7 333 43.2
Manes.14G089100 Manihot esculenta HOM05D005253 ORTHO05D006058 2.5e-46 190.3 349 44.4
Cc04_g08280 Coffea canephora HOM05D005253 ORTHO05D006058 5.5e-46 189.1 344 40.4
COL.COLO4_27496 Corchorus olitorius HOM05D005253 ORTHO05D006058 5.5e-46 189.1 330 41.8
Ah.02g114240 Amaranthus hybridus HOM05D005253 ORTHO05D006058 2.1e-45 187.2 317 43.8
Thhalv10014100m.g Eutrema salsugineum HOM05D005253 ORTHO05D006058 6.1e-45 185.7 331 41.4
QL10p020742 Quercus lobata HOM05D005253 ORTHO05D006058 1.4e-44 184.5 508 34.8
SHI17413 Sapria himalayana HOM05D005253 ORTHO05D006058 5.2e-44 182.6 311 42.1
HanXRQChr02g0051141 Helianthus annuus HOM05D005253 ORTHO05D006058 8.8e-44 181.8 322 45.3
Eucgr.K02550 Eucalyptus grandis HOM05D005253 ORTHO05D006058 1.5e-43 181.0 256 50.4
ATR0691G224 Amborella trichopoda HOM05D005253 ORTHO05D006058 3.3e-43 179.9 314 39.5
AT5G08120 Arabidopsis thaliana HOM05D005253 ORTHO05D006058 3.3e-43 179.9 331 40.5
HanXRQChr05g0157441 Helianthus annuus HOM05D005253 ORTHO05D006058 4.4e-43 179.5 338 42.6
AL6G18490 Arabidopsis lyrata HOM05D005253 ORTHO05D006058 7.4e-43 178.7 329 39.5
PGR044G0085 Punica granatum HOM05D005253 ORTHO05D006058 1.3e-42 177.9 333 43.5
ClCG04G011560 Citrullus lanatus HOM05D005253 ORTHO05D006058 1.4e-41 174.5 346 37.0
Sc04g0003900 Simmondsia chinensis HOM05D005253 ORTHO05D006058 3.1e-41 173.3 297 40.4
Lj9C438G4 Lonicera japonica HOM05D005253 ORTHO05D006058 4.1e-41 172.9 324 44.8
Aqoxy3G03749 Aquilegia oxysepala HOM05D005253 ORTHO05D006058 5.3e-41 172.6 338 39.1
CARHR205070 Cardamine hirsuta HOM05D005253 ORTHO05D006058 2.9e-39 166.8 333 39.9
Hund02544 Selenicereus undatus HOM05D005253 ORTHO05D006058 5.0e-39 166.0 310 42.9
Ca_21755_v3 Cicer arietinum L. HOM05D005253 ORTHO05D006058 8.5e-39 165.2 329 36.5
CDE05G1733 Ceratophyllum demersum HOM05D005253 ORTHO05D006058 2.5e-38 163.7 317 39.4
AUR62032138 Chenopodium quinoa HOM05D005253 ORTHO05D006058 7.2e-38 162.2 265 48.3
PSO782G3834 Papaver somniferum HOM05D005253 ORTHO05D006058 1.2e-37 161.4 311 39.2
BraA10t44904Z Brassica rapa HOM05D005253 ORTHO05D006058 1.8e-36 157.5 341 36.4
MELO3C002054.2 Cucumis melo HOM05D005253 ORTHO05D006058 4.0e-36 156.4 350 36.0
PSO063G5368 Papaver somniferum HOM05D005253 ORTHO05D006058 6.7e-36 155.6 311 41.2
C09p68830 Brassica napus HOM05D005253 ORTHO05D006058 2.6e-35 153.7 340 35.9
Lj1g0009577 Lotus japonicus HOM05D005253 ORTHO05D006058 3.3e-35 153.3 310 41.0
BcaB08g37285 Brassica carinata HOM05D005253 ORTHO05D006058 7.5e-35 152.1 340 35.6
Glyma.04G159100 Glycine max HOM05D005253 ORTHO05D006058 9.7e-35 151.8 331 34.1
CiPaw.16G080100 Carya illinoinensis HOM05D005253 ORTHO05D006058 2.8e-34 150.2 257 47.9
Ah.11g047400 Amaranthus hybridus HOM05D005253 ORTHO05D006058 6.3e-34 149.1 300 36.7
Carub.0006s0700 Capsella rubella HOM05D005253 ORTHO05D006058 8.3e-34 148.7 331 41.7
Nitab4.5_0001797g0020 Nicotiana tabacum HOM05D005253 ORTHO05D006058 4.1e-33 146.4 252 43.7
CDE02G3817 Ceratophyllum demersum HOM05D005253 ORTHO05D006058 7.0e-33 145.6 317 38.5
Prupe.8G074000 Prunus persica HOM05D005253 ORTHO05D006058 1.6e-32 144.4 231 40.7
Zm00001eb380690 Zea mays HOM05D005253 ORTHO05D006058 1.7e-31 141.0 292 37.0
A10p28550 Brassica napus HOM05D005253 ORTHO05D006058 6.5e-31 139.0 339 34.2
Atru.chr4.1592 Acer truncatum HOM05D005253 ORTHO05D006058 3.2e-30 136.7 340 38.5
HPP92_019902 Vanilla planifolia HOM05D005253 ORTHO05D006058 3.2e-30 136.7 302 35.1
Zm00001eb280850 Zea mays HOM05D005253 ORTHO05D006058 4.2e-30 136.3 298 34.9
Sabra04G0074900 Salix brachista HOM05D005253 ORTHO05D006058 7.2e-30 135.6 279 37.3
Thecc.03G108400 Theobroma cacao HOM05D005253 ORTHO05D006058 1.6e-29 134.4 238 44.5
Sp6g34840 Schrenkiella parvula HOM05D005253 ORTHO05D006058 3.6e-29 133.3 329 33.4
Aqoxy3G00549 Aquilegia oxysepala HOM05D005253 ORTHO05D006058 1.8e-28 131.0 342 33.3
CsaV3_1G006260 Cucumis sativus L. HOM05D005253 ORTHO05D006058 2.3e-28 130.6 342 33.3
Aa31LG3G18420 Aethionema arabicum HOM05D005253 ORTHO05D006058 1.5e-27 127.9 330 31.5
BolC9t59630H Brassica oleracea HOM05D005253 ORTHO05D006058 7.5e-27 125.6 341 32.3
HPP92_015550 Vanilla planifolia HOM05D005253 ORTHO05D006058 1.6e-24 117.9 285 32.6
Psat4g046080 Pisum sativum HOM05D005253 ORTHO05D006058 2.9e-23 113.6 313 30.4
Actinidia04794 Actinidia chinensis HOM05D005253 ORTHO05D006058 5.5e-22 109.4 118 56.8
Oeu014549.1 Olea europaea HOM05D005253 ORTHO05D006058 1.8e-20 104.4 103 55.3
Nn4g23537 Nelumbo nucifera HOM05D005253 ORTHO05D006058 1.7e-18 97.8 97 53.6
Os06g0284800 Oryza sativa ssp. japonica HOM05D005253 ORTHO05D006058 3.7e-18 96.7 287 28.6
Actinidia10441 Actinidia chinensis HOM05D005253 ORTHO05D006058 8.3e-18 95.5 132 51.5
Peaxi162Scf00091g00143 Petunia axillaris HOM05D005253 ORTHO05D006058 5.9e-16 89.4 233 33.0
Os09g0476000 Oryza sativa ssp. japonica HOM05D005253 ORTHO05D006058 2.3e-15 87.4 193 34.2
arahy.Tifrunner.gnm1.ann1.U6KDHT Arachis hypogaea HOM05D005253 ORTHO05D006058 8.6e-15 85.5 318 29.9
Zm00001eb315970 Zea mays HOM05D005253 ORTHO05D006058 1.9e-14 84.3 193 39.4
arahy.Tifrunner.gnm1.ann1.4B3W67 Arachis hypogaea HOM05D005253 ORTHO05D006058 3.3e-14 83.6 318 28.6
TPR.G28909 Trifolium pratense HOM05D005253 ORTHO05D006058 9.5e-14 82.0 100 52.0
Actinidia04795 Actinidia chinensis HOM05D005253 ORTHO05D006058 8.0e-13 79.0 107 44.9
BcaB08g37286 Brassica carinata HOM05D005460 ORTHO05D006058 1.0e-12 78.6 188 33.0
SMO134G0145 Selaginella moellendorffii HOM05D025852 ORTHO05D006058 1.0e-12 78.6 312 28.5
SEGI_36320 Sequoiadendron giganteum HOM05D005253 ORTHO05D006058 3.1e-12 77.0 381 28.1
Oeu051243.1 Olea europaea HOM05D005253 ORTHO05D006058 5.4e-09 66.2 92 43.5
TAR629G1609 Trochodendron aralioides HOM05D004464 ORTHO05D005135 9.2e-09 65.5 291 35.1
BraA02t04942Z Brassica rapa HOM05D009919 ORTHO05D012044 3.5e-08 63.5 111 41.4
Duzib132G0740 Durio zibethinus HOM05D005253 ORTHO05D006058 3.9e-07 60.1 74 47.3
Nn4g23536 Nelumbo nucifera HOM05D005253 ORTHO05D006058 1.1e-06 58.5 93 41.9


User provided reference genes

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