Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_52.g17061 Utricularia gibba HOM05D003721 ORTHO05D004303 0.0e+00 1237.2 713 100.0
SGA_v2.0_scaffold95G28800 Striga asiatica HOM05D003721 ORTHO05D004303 5.2e-163 578.9 690 54.8
Migut.B01806 Erythranthe guttata HOM05D003721 ORTHO05D004303 1.9e-152 543.9 685 55.5
SalBow3G1665 Salvia bowleyana HOM05D003721 ORTHO05D004303 3.3e-149 533.1 690 55.1
Dinv32529 Davidia involucrata HOM05D003721 ORTHO05D004303 8.1e-148 528.5 722 50.0
Atru.chr5.592 Acer truncatum HOM05D003721 ORTHO05D004303 1.0e-142 511.5 708 49.2
CSS0014201 Camellia sinensis var. sinensis HOM05D003721 ORTHO05D004303 1.3e-142 511.1 701 48.9
CSS0038344 Camellia sinensis var. sinensis HOM05D003721 ORTHO05D004303 6.6e-142 508.8 701 49.1
Cc02_g38690 Coffea canephora HOM05D003721 ORTHO05D004303 5.6e-141 505.8 694 49.4
MSTRG.20868 Avicennia marina HOM05D003721 ORTHO05D004303 2.8e-140 503.4 711 53.9
GSVIVG01027009001 Vitis vinifera HOM05D003721 ORTHO05D004303 4.7e-140 502.7 716 52.7
COL.COLO4_06374 Corchorus olitorius HOM05D003721 ORTHO05D004303 6.8e-139 498.8 699 48.8
Lj7A506T70 Lonicera japonica HOM05D003721 ORTHO05D004303 2.6e-138 496.9 746 50.0
QL04p055909 Quercus lobata HOM05D003721 ORTHO05D004303 2.6e-138 496.9 711 48.9
Thecc.01G351200 Theobroma cacao HOM05D003721 ORTHO05D004303 3.4e-138 496.5 702 49.4
Sopen01g039000 Solanum pennellii HOM05D003721 ORTHO05D004303 6.4e-137 492.3 700 46.6
TWI59G1183 Tripterygium wilfordii HOM05D003721 ORTHO05D004303 1.4e-136 491.1 703 48.2
Solyc01g095210.3 Solanum lycopersicum HOM05D003721 ORTHO05D004303 3.2e-136 490.0 696 47.3
TAR629G3186 Trochodendron aralioides HOM05D003721 ORTHO05D004303 4.1e-136 489.6 756 45.9
Ciclev10018933m.g Citrus clementina HOM05D003721 ORTHO05D004303 7.1e-136 488.8 715 51.7
Duzib133G0509 Durio zibethinus HOM05D003721 ORTHO05D004303 4.6e-135 486.1 733 46.2
vmacro13221 Vaccinium macrocarpon HOM05D003721 ORTHO05D004303 1.3e-134 484.6 744 46.0
Dinv43871 Davidia involucrata HOM05D003721 ORTHO05D004303 8.6e-134 481.9 715 46.6
Manes.07G084500 Manihot esculenta HOM05D003721 ORTHO05D004303 1.9e-133 480.7 727 47.5
Peaxi162Scf00020g01717 Petunia axillaris HOM05D003721 ORTHO05D004303 1.9e-133 480.7 709 46.1
Lalb_Chr17g0338961 Lupinus albus HOM05D003721 ORTHO05D004303 4.3e-133 479.6 721 45.2
CSS0042065 Camellia sinensis var. sinensis HOM05D003721 ORTHO05D004303 5.6e-133 479.2 700 47.6
Potri.002G165500 Populus trichocarpa HOM05D003721 ORTHO05D004303 5.6e-133 479.2 711 46.1
PSO170G3080 Papaver somniferum HOM05D003721 ORTHO05D004303 2.1e-132 477.2 738 45.4
Glyma.16G030600 Glycine max HOM05D003721 ORTHO05D004303 4.7e-132 476.1 723 47.6
Glyma.07G062500 Glycine max HOM05D003721 ORTHO05D004303 1.4e-131 474.6 719 44.9
Rhsim07G0009400 Rhododendron simsii HOM05D003721 ORTHO05D004303 4.0e-131 473.0 717 46.3
CANSAT94G0013 Cannabis sativa HOM05D003721 ORTHO05D004303 6.9e-131 472.2 686 47.8
Nn1g01721 Nelumbo nucifera HOM05D003721 ORTHO05D004303 8.9e-131 471.9 726 45.6
Medtr7g079200 Medicago truncatula HOM05D003721 ORTHO05D004303 1.3e-129 468.0 721 48.3
FAN10G1929 Fragaria x ananassa HOM05D003721 ORTHO05D004303 1.7e-129 467.6 722 47.5
Glyma.18G239200 Glycine max HOM05D003721 ORTHO05D004303 1.7e-129 467.6 687 45.3
FAN10G1794 Fragaria x ananassa HOM05D003721 ORTHO05D004303 2.2e-129 467.2 722 47.9
Potri.014G091300 Populus trichocarpa HOM05D003721 ORTHO05D004303 2.9e-129 466.8 732 45.8
FAN03G0785 Fragaria x ananassa HOM05D003721 ORTHO05D004303 4.9e-129 466.1 725 46.1
Ca_07946_v3 Cicer arietinum L. HOM05D003721 ORTHO05D004303 1.1e-128 464.9 732 46.7
Lj1g0019249 Lotus japonicus HOM05D003721 ORTHO05D004303 1.1e-128 464.9 711 47.1
CAN.G78.136 Capsicum annuum HOM05D003721 ORTHO05D004303 1.4e-128 464.5 694 45.2
ECA240G1536 Erigeron canadensis HOM05D003721 ORTHO05D004303 1.9e-128 464.2 692 47.4
DCAR_008641 Daucus carota HOM05D003721 ORTHO05D004303 5.4e-128 462.6 697 46.6
Cfa003861 Carpinus fangiana HOM05D003721 ORTHO05D004303 2.7e-127 460.3 750 45.9
VMungo0331G1476 Vigna mungo HOM05D003721 ORTHO05D004303 2.7e-127 460.3 721 44.8
FvH4_7g15532 Fragaria vesca HOM05D003721 ORTHO05D004303 6.0e-127 459.1 721 47.7
FAN06G3247 Fragaria x ananassa HOM05D003721 ORTHO05D004303 6.0e-127 459.1 721 47.9
PSO063G0643 Papaver somniferum HOM05D003721 ORTHO05D004303 1.7e-126 457.6 733 44.6
Phvul.010G105500 Phaseolus vulgaris HOM05D003721 ORTHO05D004303 8.7e-126 455.3 731 46.1
Glyma.09G253700 Glycine max HOM05D003721 ORTHO05D004303 1.5e-125 454.5 691 45.9
arahy.Tifrunner.gnm1.ann1.J8U9TP Arachis hypogaea HOM05D003721 ORTHO05D004303 2.5e-125 453.8 697 46.3
CiPaw.01G068800 Carya illinoinensis HOM05D003721 ORTHO05D004303 2.5e-125 453.8 721 46.5
RcHm_v2.0_Chr1g0357861 Rosa chinensis HOM05D003721 ORTHO05D004303 2.5e-125 453.8 700 47.7
arahy.Tifrunner.gnm1.ann1.X01UQ7 Arachis hypogaea HOM05D003721 ORTHO05D004303 4.3e-125 453.0 733 44.9
Actinidia20169 Actinidia chinensis HOM05D003721 ORTHO05D004303 7.3e-125 452.2 727 44.8
TPR.G29569 Trifolium pratense HOM05D003721 ORTHO05D004303 2.8e-124 450.3 721 44.0
Gohir.D12G110000 Gossypium hirsutum HOM05D003721 ORTHO05D004303 3.6e-124 449.9 686 46.6
Ah.05g180090 Amaranthus hybridus HOM05D003721 ORTHO05D004303 4.8e-124 449.5 702 50.9
FAN06G4946 Fragaria x ananassa HOM05D003721 ORTHO05D004303 1.4e-123 448.0 746 46.4
Hund16678 Selenicereus undatus HOM05D003721 ORTHO05D004303 9.0e-123 445.3 724 44.3
Sc23g0002500 Simmondsia chinensis HOM05D003721 ORTHO05D004303 1.2e-122 444.9 695 44.7
Gohir.A12G106100 Gossypium hirsutum HOM05D003721 ORTHO05D004303 2.6e-122 443.7 699 49.9
Sp5g01840 Schrenkiella parvula HOM05D003721 ORTHO05D004303 7.6e-122 442.2 725 48.0
Sabra14G0066200 Salix brachista HOM05D003721 ORTHO05D004303 1.3e-121 441.4 751 43.9
AUR62004419 Chenopodium quinoa HOM05D003721 ORTHO05D004303 1.7e-121 441.0 695 44.9
PGR031G3178 Punica granatum HOM05D003721 ORTHO05D004303 6.4e-121 439.1 700 46.7
Thhalv10005812m.g Eutrema salsugineum HOM05D003721 ORTHO05D004303 8.4e-121 438.7 728 46.6
Nitab4.5_0003501g0020 Nicotiana tabacum HOM05D003721 ORTHO05D004303 5.4e-120 436.0 683 46.4
AUR62022625 Chenopodium quinoa HOM05D003721 ORTHO05D004303 2.7e-119 433.7 695 44.5
Sed0001790 Sechium edule HOM05D003721 ORTHO05D004303 2.7e-119 433.7 724 44.1
CsaV3_6G000920 Cucumis sativus L. HOM05D003721 ORTHO05D004303 4.6e-119 433.0 722 46.7
Gorai.008G119300 Gossypium raimondii HOM05D003721 ORTHO05D004303 6.0e-119 432.6 687 49.9
Sed0002636 Sechium edule HOM05D003721 ORTHO05D004303 6.0e-119 432.6 753 46.1
HanXRQChr06g0166991 Helianthus annuus HOM05D003721 ORTHO05D004303 1.3e-118 431.4 687 48.6
arahy.Tifrunner.gnm1.ann1.QXLJ4L Arachis hypogaea HOM05D003721 ORTHO05D004303 6.7e-118 429.1 680 44.9
TPR.G18168 Trifolium pratense HOM05D003721 ORTHO05D004303 4.3e-117 426.4 723 48.0
Gohir.A11G093000 Gossypium hirsutum HOM05D003721 ORTHO05D004303 5.6e-117 426.0 696 44.1
Nitab4.5_0000915g0020 Nicotiana tabacum HOM05D003721 ORTHO05D004303 6.2e-116 422.5 680 43.5
arahy.Tifrunner.gnm1.ann1.M56506 Arachis hypogaea HOM05D003721 ORTHO05D004303 2.4e-115 420.6 674 44.5
AT2G46180 Arabidopsis thaliana HOM05D003721 ORTHO05D004303 1.5e-114 417.9 716 47.5
A09p53630 Brassica napus HOM05D003721 ORTHO05D004303 2.0e-114 417.5 712 46.3
MD07G1130300 Malus domestica HOM05D003721 ORTHO05D004303 2.0e-114 417.5 706 43.8
A07p25580 Brassica napus HOM05D003721 ORTHO05D004303 2.9e-113 413.7 678 47.9
BraA09t40785Z Brassica rapa HOM05D003721 ORTHO05D004303 4.9e-113 412.9 713 46.4
Duzib138G0478 Durio zibethinus HOM05D003721 ORTHO05D004303 1.1e-112 411.8 714 43.6
Eucgr.D02329 Eucalyptus grandis HOM05D003721 ORTHO05D004303 2.4e-112 410.6 707 43.3
C06p27570 Brassica napus HOM05D003721 ORTHO05D004303 7.1e-112 409.1 717 45.6
BcaC07g40669 Brassica carinata HOM05D003721 ORTHO05D004303 2.7e-111 407.1 713 45.9
C08p36410 Brassica napus HOM05D003721 ORTHO05D004303 2.7e-111 407.1 713 45.9
BraA07t30199Z Brassica rapa HOM05D003721 ORTHO05D004303 3.5e-111 406.8 688 46.9
AL4G45430 Arabidopsis lyrata HOM05D003721 ORTHO05D004303 4.6e-111 406.4 719 46.6
BolC8t51224H Brassica oleracea HOM05D003721 ORTHO05D004303 4.6e-111 406.4 713 45.9
ClCG06G003380 Citrullus lanatus HOM05D003721 ORTHO05D004303 2.3e-110 404.1 809 41.8
AT3G61570 Arabidopsis thaliana HOM05D003721 ORTHO05D004303 5.1e-110 402.9 725 45.0
EL10Ac1g00346 Beta vulgaris HOM05D003721 ORTHO05D004303 8.7e-110 402.1 721 42.3
BolC6t37925H Brassica oleracea HOM05D003721 ORTHO05D004303 2.5e-109 400.6 736 44.2
Sp5g32820 Schrenkiella parvula HOM05D003721 ORTHO05D004303 5.6e-109 399.4 736 45.8
MBI07_g11740_MAGBIO Magnolia biondii HOM05D003721 ORTHO05D004303 7.4e-109 399.1 751 41.9
AL5G43940 Arabidopsis lyrata HOM05D003721 ORTHO05D004303 3.7e-108 396.7 704 45.9
Ca_03491_v3 Cicer arietinum L. HOM05D003721 ORTHO05D004303 1.4e-107 394.8 713 41.0
Medtr8g028445 Medicago truncatula HOM05D003721 ORTHO05D004303 1.2e-106 391.7 681 42.1
Prupe.2G178900 Prunus persica HOM05D003721 ORTHO05D004303 3.8e-105 386.7 733 40.4
Gorai.007G104100 Gossypium raimondii HOM05D003721 ORTHO05D004303 8.4e-105 385.6 685 44.5
BcaC08g45136 Brassica carinata HOM05D003721 ORTHO05D004303 1.4e-104 384.8 723 43.8
Cpa.g.sc11.59 Carica papaya HOM05D003721 ORTHO05D004303 1.9e-104 384.4 488 50.2
Thhalv10001332m.g Eutrema salsugineum HOM05D003721 ORTHO05D004303 5.5e-104 382.9 700 45.9
CDE02G2110 Ceratophyllum demersum HOM05D003721 ORTHO05D004303 1.6e-103 381.3 680 40.9
Oeu010635.1 Olea europaea HOM05D003721 ORTHO05D004303 6.0e-103 379.4 736 41.4
BcaB02g07370 Brassica carinata HOM05D003721 ORTHO05D004303 1.8e-102 377.9 670 46.6
MELO3C021177.2 Cucumis melo HOM05D003721 ORTHO05D004303 1.8e-102 377.9 613 47.6
BcaC07g42682 Brassica carinata HOM05D003721 ORTHO05D004303 3.9e-102 376.7 676 45.9
Aqoxy5G04062 Aquilegia oxysepala HOM05D003721 ORTHO05D004303 8.7e-102 375.6 755 40.5
Zm00001eb042060 Zea mays HOM05D003721 ORTHO05D004303 1.9e-101 374.4 676 40.4
Lsat_1_v5_gn_3_138600 Lactuca sativa HOM05D003721 ORTHO05D004303 9.7e-101 372.1 707 42.3
THA.LOC104817323 Tarenaya hassleriana HOM05D003721 ORTHO05D004303 1.4e-99 368.2 712 43.8
VMungo1383G3272 Vigna mungo HOM05D003721 ORTHO05D004303 2.4e-99 367.5 644 45.3
BcaC07g40653 Brassica carinata HOM05D003721 ORTHO05D004303 4.1e-99 366.7 719 39.2
CDE08G1001 Ceratophyllum demersum HOM05D003721 ORTHO05D004303 6.9e-99 365.9 681 40.4
Phvul.008G057500 Phaseolus vulgaris HOM05D003721 ORTHO05D004303 3.4e-98 363.6 731 41.9
Lalb_Chr04g0259321 Lupinus albus HOM05D003721 ORTHO05D004303 5.9e-98 362.8 485 48.9
MD01G1072600 Malus domestica HOM05D003721 ORTHO05D004303 1.3e-97 361.7 730 45.3
HPP92_023080 Vanilla planifolia HOM05D003721 ORTHO05D004303 1.7e-97 361.3 711 39.0
Aa31LG1G27570 Aethionema arabicum HOM05D003721 ORTHO05D004303 3.6e-95 353.6 692 44.4
Psat3g105680 Pisum sativum HOM05D003721 ORTHO05D004303 2.5e-93 347.4 618 42.4
Carub.0004s2886 Capsella rubella HOM05D003721 ORTHO05D004303 1.8e-91 341.3 727 43.3
Gohir.D11G097866 Gossypium hirsutum HOM05D003721 ORTHO05D004303 4.5e-90 336.7 603 43.4
PGSC0003DMG400000197 Solanum tuberosum HOM05D003721 ORTHO05D004303 5.9e-90 336.3 291 65.3
ATR1093G009 Amborella trichopoda HOM05D003721 ORTHO05D004303 3.8e-89 333.6 738 37.4
CARHR141460 Cardamine hirsuta HOM05D003721 ORTHO05D004303 4.8e-84 316.6 444 53.8
Haze_15575 Corylus avellana HOM05D003721 ORTHO05D004303 9.1e-83 312.4 610 40.7
Haze_15580 Corylus avellana HOM05D003721 ORTHO05D004303 7.7e-82 309.3 610 40.3
BcaC07g42673 Brassica carinata HOM05D003721 ORTHO05D004303 3.6e-79 300.4 687 39.7
Os08g0386900 Oryza sativa ssp. japonica HOM05D003721 ORTHO05D004303 3.6e-79 300.4 316 56.0
SEGI_16602 Sequoiadendron giganteum HOM05D003721 ORTHO05D004303 4.4e-77 293.5 282 57.4
Mapoly0053s0042 Marchantia polymorpha HOM05D003721 ORTHO05D004303 4.8e-76 290.0 741 32.8
Pp3c12_14500 Physcomitrium patens HOM05D003721 ORTHO05D004303 5.0e-57 226.9 281 47.7
BcaC07g40657 Brassica carinata HOM05D003721 ORTHO05D004303 3.0e-54 217.6 249 54.6
Sabra02G0146000 Salix brachista HOM05D003721 ORTHO05D004303 1.3e-49 202.2 601 32.8
Pp3c3_18730 Physcomitrium patens HOM05D003721 ORTHO05D004303 8.6e-49 199.5 698 28.8
QL01p002178 Quercus lobata HOM05D003721 ORTHO05D004303 2.5e-48 198.0 288 46.9
Hma1.2p1_0623F.1_g191170 Hydrangea macrophylla HOM05D003721 ORTHO05D004303 1.4e-46 192.2 366 41.8
AagrBONN_evm.TU.Sc2ySwM_369.3 Anthoceros agrestis HOM05D003721 ORTHO05D004303 7.0e-43 179.9 218 45.9
Actinidia37722 Actinidia chinensis HOM05D003721 ORTHO05D004074 1.1e-40 172.6 398 38.2
TPR.G35781 Trifolium pratense HOM05D003721 ORTHO05D004303 1.1e-38 166.0 346 36.4
Haze_15579 Corylus avellana HOM05D003721 ORTHO05D004303 1.1e-35 156.0 140 67.1
SGA_v2.0_scaffold4G02274 Striga asiatica HOM05D003721 ORTHO05D004303 1.7e-28 132.1 183 50.8
Haze_15574 Corylus avellana HOM05D003721 ORTHO05D004303 1.1e-24 119.4 120 61.7
Actinidia10078 Actinidia chinensis HOM05D003721 ORTHO05D004303 6.2e-23 113.6 386 29.3
arahy.Tifrunner.gnm1.ann1.LL4IHI Arachis hypogaea HOM05D003721 ORTHO05D004303 4.9e-20 104.0 126 49.2
Actinidia37723 Actinidia chinensis HOM05D003721 ORTHO05D004303 2.7e-18 98.2 196 39.8
Migut.H02011 Erythranthe guttata HOM05D005133 ORTHO05D006685 4.6e-18 97.4 106 56.6
CBR_g40304 Chara braunii HOM05D001539 ORTHO05D000937 2.3e-17 95.1 121 43.8
Cpa.g.sc11.56 Carica papaya HOM05D003721 ORTHO05D004303 1.6e-15 89.0 107 54.2
MCO16G164 Micromonas commoda HOM05D003721 ORTHO05D004303 1.6e-15 89.0 238 30.3
BcaC08g45231 Brassica carinata HOM05D003721 ORTHO05D004303 2.8e-15 88.2 145 39.3
Lalb_Chr04g0259331 Lupinus albus HOM05D003721 ORTHO05D004303 4.7e-15 87.4 254 33.1
Actinidia21288 Actinidia chinensis HOM05D003721 ORTHO05D004303 1.4e-14 85.9 63 73.0
SHI13345 Sapria himalayana HOM05D003721 ORTHO05D004303 3.1e-14 84.7 117 43.6
Migut.B01807 Erythranthe guttata HOM05D005133 ORTHO05D006685 1.9e-11 75.5 76 56.6
Cre12.g495800 Chlamydomonas reinhardtii HOM05D003721 ORTHO05D004303 2.4e-11 75.1 205 30.7
SEGI_39264 Sequoiadendron giganteum HOM05D003721 ORTHO05D004303 6.6e-09 67.0 325 27.4
CBR_g40298 Chara braunii HOM05D003721 ORTHO05D004303 1.6e-07 62.4 154 35.7
Carub.0005s2826 Capsella rubella HOM05D003721 ORTHO05D004303 1.1e-06 59.7 198 31.3


User provided reference genes

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