Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_37.g12619 Utricularia gibba HOM05D004265 ORTHO05D005175 1.3e-137 493.0 256 100.0
Migut.B00969 Erythranthe guttata HOM05D004265 ORTHO05D005175 3.2e-78 295.8 257 63.4
SalBow7G1726 Salvia bowleyana HOM05D004265 ORTHO05D005175 3.2e-78 295.8 249 61.8
Lsat_1_v5_gn_5_104100 Lactuca sativa HOM05D004265 ORTHO05D005175 5.6e-75 285.0 220 64.5
Actinidia01508 Actinidia chinensis HOM05D004265 ORTHO05D005175 1.6e-74 283.5 237 62.0
Dinv30893 Davidia involucrata HOM05D004265 ORTHO05D005175 1.1e-73 280.8 202 70.8
TWI56G1455 Tripterygium wilfordii HOM05D004265 ORTHO05D005175 1.7e-71 273.5 220 64.5
HanXRQChr10g0294471 Helianthus annuus HOM05D004265 ORTHO05D005175 2.2e-71 273.1 242 59.9
Eucgr.H03290 Eucalyptus grandis HOM05D004265 ORTHO05D005175 1.1e-70 270.8 249 57.8
CANSAT54G0622 Cannabis sativa HOM05D004265 ORTHO05D005175 1.4e-70 270.4 247 57.5
ECA234G3802 Erigeron canadensis HOM05D004265 ORTHO05D005175 1.4e-70 270.4 220 61.4
Atru.chr2.195 Acer truncatum HOM05D004265 ORTHO05D005175 1.9e-70 270.0 225 63.6
Phvul.007G201300 Phaseolus vulgaris HOM05D004265 ORTHO05D005175 9.2e-70 267.7 236 60.2
arahy.Tifrunner.gnm1.ann1.7983KJ Arachis hypogaea HOM05D004265 ORTHO05D005175 2.1e-69 266.5 220 60.5
arahy.Tifrunner.gnm1.ann1.S7F1TF Arachis hypogaea HOM05D004265 ORTHO05D005175 2.1e-69 266.5 220 60.5
PSO210G0294 Papaver somniferum HOM05D004265 ORTHO05D005175 2.7e-69 266.2 246 57.3
MD12G1206000 Malus domestica HOM05D004265 ORTHO05D005175 3.5e-69 265.8 250 55.2
Rhsim05G0126500 Rhododendron simsii HOM05D004265 ORTHO05D005175 6.0e-69 265.0 175 73.7
Cpa.g.sc48.160 Carica papaya HOM05D004265 ORTHO05D005175 1.0e-68 264.2 239 59.4
Thecc.05G323000 Theobroma cacao HOM05D004265 ORTHO05D005175 1.3e-68 263.8 220 62.7
Potri.005G017400 Populus trichocarpa HOM05D004265 ORTHO05D005175 1.9e-67 260.0 220 60.9
PSO761G0637 Papaver somniferum HOM05D004265 ORTHO05D005175 1.2e-66 257.3 250 54.8
HPP92_026862 Vanilla planifolia HOM05D004265 ORTHO05D005175 6.2e-66 255.0 178 71.3
CiPaw.08G155500 Carya illinoinensis HOM05D004265 ORTHO05D005175 8.1e-66 254.6 239 56.9
RcHm_v2.0_Chr3g0457041 Rosa chinensis HOM05D004265 ORTHO05D005175 8.1e-66 254.6 237 57.0
Carub.0002s0772 Capsella rubella HOM05D004265 ORTHO05D005175 1.8e-65 253.4 238 55.0
Lj1g0016387 Lotus japonicus HOM05D004265 ORTHO05D005175 1.8e-65 253.4 220 59.5
Medtr7g112110 Medicago truncatula HOM05D004265 ORTHO05D005175 1.8e-65 253.4 220 59.5
Cc02_g35030 Coffea canephora HOM05D004265 ORTHO05D005175 2.3e-65 253.1 225 58.7
Medtr1g084040 Medicago truncatula HOM05D004265 ORTHO05D005175 2.3e-65 253.1 194 64.4
SGA_v2.0_scaffold53G19289 Striga asiatica HOM05D004265 ORTHO05D005175 2.3e-65 253.1 253 55.3
Lj5g0009766 Lotus japonicus HOM05D004265 ORTHO05D005175 3.1e-65 252.7 242 57.0
Hma1.2p1_0052F.1_g030750 Hydrangea macrophylla HOM05D004265 ORTHO05D005175 5.2e-65 251.9 220 61.4
Dinv24444 Davidia involucrata HOM05D004265 ORTHO05D005175 2.0e-64 250.0 249 55.8
Glyma.20G097600 Glycine max HOM05D004265 ORTHO05D005175 7.5e-64 248.1 200 63.5
QL03p013649 Quercus lobata HOM05D004265 ORTHO05D005175 9.9e-64 247.7 242 57.0
Ca_09300_v3 Cicer arietinum L. HOM05D001672 ORTHO05D007349 1.7e-63 246.9 225 57.8
VMungo0720G2336 Vigna mungo HOM05D004265 ORTHO05D005175 3.7e-63 245.7 200 62.5
QL03p039848 Quercus lobata HOM05D004265 ORTHO05D005175 6.4e-63 245.0 240 56.2
Sabra05G0011400 Salix brachista HOM05D004265 ORTHO05D005175 6.4e-63 245.0 220 58.6
CARHR055200 Cardamine hirsuta HOM05D004265 ORTHO05D005175 2.4e-62 243.0 219 57.1
CSS0008259 Camellia sinensis var. sinensis HOM05D004265 ORTHO05D005175 9.2e-62 241.1 243 53.1
AUR62006753 Chenopodium quinoa HOM05D004265 ORTHO05D005175 9.2e-62 241.1 222 58.6
Hund21868 Selenicereus undatus HOM05D004265 ORTHO05D005175 9.2e-62 241.1 222 57.2
Ah.04g158690 Amaranthus hybridus HOM05D004265 ORTHO05D005175 1.2e-61 240.7 179 67.0
MBI18_g17317_MAGBIO Magnolia biondii HOM05D004265 ORTHO05D005175 1.2e-61 240.7 222 57.2
Potri.013G008700 Populus trichocarpa HOM05D004265 ORTHO05D005175 1.2e-61 240.7 247 53.4
Zm00001eb396130 Zea mays HOM05D004265 ORTHO05D005175 2.7e-61 239.6 249 51.4
Sc16g0009030 Simmondsia chinensis HOM05D004265 ORTHO05D005175 3.5e-61 239.2 222 56.3
TPR.G2612 Trifolium pratense HOM05D004265 ORTHO05D005175 3.5e-61 239.2 219 58.0
Glyma.19G228500 Glycine max HOM05D004265 ORTHO05D005175 7.8e-61 238.0 225 54.7
GSVIVG01031240001 Vitis vinifera HOM05D004265 ORTHO05D005175 1.0e-60 237.7 258 51.9
Glyma.10G147100 Glycine max HOM05D004265 ORTHO05D005175 1.7e-60 236.9 200 61.0
Lalb_Chr02g0147811 Lupinus albus HOM05D004265 ORTHO05D005175 3.0e-60 236.1 261 50.6
AUR62000397 Chenopodium quinoa HOM05D004265 ORTHO05D005175 2.5e-59 233.0 219 58.4
AT1G56423 Arabidopsis thaliana HOM05D004265 ORTHO05D005175 3.3e-59 232.6 217 56.2
Ciclev10002200m.g Citrus clementina HOM05D004265 ORTHO05D005175 3.3e-59 232.6 220 55.9
Peaxi162Scf00750g00013 Petunia axillaris HOM05D001712 ORTHO05D001731 3.3e-59 232.6 177 65.0
AL1G66120 Arabidopsis lyrata HOM05D004265 ORTHO05D005175 4.3e-59 232.3 225 54.2
Duzib106G0903 Durio zibethinus HOM05D004265 ORTHO05D005175 4.3e-59 232.3 238 52.5
Medtr7g112120 Medicago truncatula HOM05D004265 ORTHO05D005175 4.3e-59 232.3 221 57.0
Phvul.001G225100 Phaseolus vulgaris HOM05D004265 ORTHO05D005175 7.3e-59 231.5 194 58.8
SHI18053 Sapria himalayana HOM05D001712 ORTHO05D001731 9.5e-59 231.1 191 59.2
Manes.08G111300 Manihot esculenta HOM05D004265 ORTHO05D005175 2.8e-58 229.6 238 52.9
Lalb_Chr18g0046091 Lupinus albus HOM05D004265 ORTHO05D005175 1.8e-57 226.9 220 51.8
Os03g0307000 Oryza sativa ssp. japonica HOM05D004265 ORTHO05D005175 1.8e-57 226.9 247 51.0
Manes.09G176700 Manihot esculenta HOM05D004265 ORTHO05D005175 2.4e-57 226.5 243 52.7
EL10Ac4g09452 Beta vulgaris HOM05D004265 ORTHO05D005175 3.1e-57 226.1 219 56.6
Lsat_1_v5_gn_9_122281 Lactuca sativa HOM05D004265 ORTHO05D005175 4.0e-57 225.7 182 60.4
Peaxi162Scf00484g00005 Petunia axillaris HOM05D004265 ORTHO05D005175 4.0e-57 225.7 179 63.7
Nn3g16212 Nelumbo nucifera HOM05D004265 ORTHO05D005175 5.2e-57 225.3 213 57.3
Sp2g06420 Schrenkiella parvula HOM05D004265 ORTHO05D005175 5.2e-57 225.3 219 55.3
CiPaw.07G029600 Carya illinoinensis HOM05D004265 ORTHO05D005175 6.8e-57 224.9 215 54.9
Lj5P334T30 Lonicera japonica HOM05D004265 ORTHO05D005175 4.4e-56 222.2 187 62.0
Oeu013207.1 Olea europaea HOM05D004265 ORTHO05D005175 5.8e-56 221.9 148 70.9
PGR031G2746 Punica granatum HOM05D004265 ORTHO05D005175 1.3e-55 220.7 220 53.6
Sed0011283 Sechium edule HOM05D004265 ORTHO05D005175 1.3e-55 220.7 220 53.2
Duzib177G0587 Durio zibethinus HOM05D004265 ORTHO05D005175 4.9e-55 218.8 220 55.0
Prupe.6G313200 Prunus persica HOM05D004265 ORTHO05D005175 4.9e-55 218.8 247 50.6
Zm00001eb014630 Zea mays HOM05D004265 ORTHO05D005175 6.4e-55 218.4 171 63.2
Psat3g012800 Pisum sativum HOM05D004265 ORTHO05D005175 1.1e-54 217.6 219 53.4
Nitab4.5_0000368g0100 Nicotiana tabacum HOM05D004265 ORTHO05D005175 1.4e-54 217.2 226 52.2
Nitab4.5_0004873g0020 Nicotiana tabacum HOM05D004265 ORTHO05D005175 1.4e-54 217.2 226 52.2
DCAR_005425 Daucus carota HOM05D004265 ORTHO05D005175 2.1e-53 213.4 173 64.2
Aqoxy2G02767 Aquilegia oxysepala HOM05D004265 ORTHO05D005175 3.5e-53 212.6 222 51.4
Haze_04061 Corylus avellana HOM05D004265 ORTHO05D005175 4.6e-53 212.2 225 52.9
VMungo1383G0172 Vigna mungo HOM05D004265 ORTHO05D005175 4.6e-53 212.2 194 55.2
Cfa006702 Carpinus fangiana HOM05D004265 ORTHO05D005175 7.8e-53 211.5 247 49.4
FAN05G3791 Fragaria x ananassa HOM05D004265 ORTHO05D005175 2.3e-52 209.9 237 49.8
FAN09G1150 Fragaria x ananassa HOM05D004265 ORTHO05D005175 2.3e-52 209.9 237 49.8
Peaxi162Scf00673g00321 Petunia axillaris HOM05D004265 ORTHO05D005175 3.9e-52 209.1 226 50.9
CDE11G0488 Ceratophyllum demersum HOM05D004265 ORTHO05D005175 5.1e-52 208.8 239 47.3
Sopen01g043990 Solanum pennellii HOM05D004265 ORTHO05D005175 8.7e-52 208.0 226 50.4
HanXRQChr03g0072861 Helianthus annuus HOM05D004265 ORTHO05D005175 1.1e-51 207.6 184 57.6
PGSC0003DMG400002801 Solanum tuberosum HOM05D004265 ORTHO05D005175 1.1e-51 207.6 226 50.0
Glyma.03G231300 Glycine max HOM05D004265 ORTHO05D005175 1.9e-51 206.8 233 50.6
Solyc01g100480.3 Solanum lycopersicum HOM05D004265 ORTHO05D005175 2.5e-51 206.5 226 50.0
SEGI_19544 Sequoiadendron giganteum HOM05D004265 ORTHO05D005175 1.2e-50 204.1 220 48.6
FvH4_6g07440 Fragaria vesca HOM05D004265 ORTHO05D005175 3.6e-50 202.6 237 48.5
FAN02G3541 Fragaria x ananassa HOM05D004265 ORTHO05D005175 3.6e-50 202.6 199 53.8
FAN14G5021 Fragaria x ananassa HOM05D004265 ORTHO05D005175 3.6e-50 202.6 237 48.5
Gohir.A13G175800 Gossypium hirsutum HOM05D004265 ORTHO05D005175 6.2e-50 201.8 249 47.4
C09p24060 Brassica napus HOM05D004265 ORTHO05D005175 1.1e-49 201.1 236 48.7
ATR0796G255 Amborella trichopoda HOM05D004265 ORTHO05D005175 5.3e-49 198.7 253 45.8
BcaC04g22056 Brassica carinata HOM05D004265 ORTHO05D005175 5.3e-49 198.7 219 50.2
BolC9t55323H Brassica oleracea HOM05D004265 ORTHO05D005175 5.3e-49 198.7 219 50.2
Ca_10171_v3 Cicer arietinum L. HOM05D004265 ORTHO05D005175 6.9e-49 198.4 259 47.5
Gohir.D13G181500 Gossypium hirsutum HOM05D004265 ORTHO05D005175 1.5e-48 197.2 249 46.6
Gorai.013G207000 Gossypium raimondii HOM05D004265 ORTHO05D005175 1.5e-48 197.2 249 46.6
MD04G1193100 Malus domestica HOM05D004265 ORTHO05D005175 2.0e-48 196.8 210 51.4
DCAR_025282 Daucus carota HOM05D004265 ORTHO05D005175 5.8e-48 195.3 168 59.5
BraA09t37526Z Brassica rapa HOM05D004265 ORTHO05D005175 7.6e-48 194.9 220 49.5
Psat0s3400g0040 Pisum sativum HOM05D004265 ORTHO05D005175 1.3e-47 194.1 244 45.5
SMO119G0102 Selaginella moellendorffii HOM05D004265 ORTHO05D005175 2.9e-47 193.0 178 52.2
SEGI_10604 Sequoiadendron giganteum HOM05D004265 ORTHO05D005175 3.8e-47 192.6 230 46.1
BcaB07g31123 Brassica carinata HOM05D004265 ORTHO05D005175 8.4e-47 191.4 219 49.3
A09p19080 Brassica napus HOM05D004265 ORTHO05D005175 1.2e-45 187.6 220 48.6
Thhalv10023634m.g Eutrema salsugineum HOM05D004265 ORTHO05D005175 6.0e-45 185.3 217 47.9
AagrBONN_evm.TU.Sc2ySwM_228.834 Anthoceros agrestis HOM05D004265 ORTHO05D005175 7.8e-45 184.9 180 51.1
HPP92_003567 Vanilla planifolia HOM05D004265 ORTHO05D005175 1.3e-44 184.1 218 48.2
CSS0024329 Camellia sinensis var. sinensis HOM05D004265 ORTHO05D005175 2.3e-44 183.3 184 51.6
CSS0041734 Camellia sinensis var. sinensis HOM05D004265 ORTHO05D005175 2.3e-44 183.3 184 51.6
Oeu016567.1 Olea europaea HOM05D004265 ORTHO05D005175 3.0e-44 183.0 140 67.1
THA.LOC104816889 Tarenaya hassleriana HOM05D004265 ORTHO05D005175 3.9e-44 182.6 220 47.3
DCAR_029352 Daucus carota HOM05D004265 ORTHO05D005175 6.6e-44 181.8 183 49.2
Actinidia25851 Actinidia chinensis HOM05D004265 ORTHO05D005175 1.5e-43 180.6 178 54.5
Aa31LG2G11490 Aethionema arabicum HOM05D004265 ORTHO05D005175 5.3e-41 172.2 225 45.8
Gohir.A11G293141 Gossypium hirsutum HOM05D004265 ORTHO05D005175 3.4e-40 169.5 224 42.9
Gohir.D11G299703 Gossypium hirsutum HOM05D004265 ORTHO05D005175 3.4e-40 169.5 224 42.9
Gohir.D11G307566 Gossypium hirsutum HOM05D004265 ORTHO05D005175 3.4e-40 169.5 224 42.9
Gorai.007G338000 Gossypium raimondii HOM05D004265 ORTHO05D005175 3.4e-40 169.5 224 42.9
Rhsim01G0290900 Rhododendron simsii HOM05D004265 ORTHO05D005175 3.4e-40 169.5 200 47.5
MELO3C004187.2 Cucumis melo HOM05D004265 ORTHO05D005175 6.4e-39 165.2 249 42.2
ClCG00G002440 Citrullus lanatus HOM05D004265 ORTHO05D005175 2.4e-38 163.3 220 44.1
ClCG02G014940 Citrullus lanatus HOM05D004265 ORTHO05D005175 2.4e-38 163.3 220 44.1
Mapoly0127s0047 Marchantia polymorpha HOM05D004265 ORTHO05D005175 3.0e-36 156.4 198 40.9
Lsat_1_v5_gn_3_11681 Lactuca sativa HOM05D004265 ORTHO05D005175 8.7e-36 154.8 125 66.4
Sed0005794 Sechium edule HOM05D004265 ORTHO05D005175 8.7e-36 154.8 182 45.1
TPR.G1662 Trifolium pratense HOM05D004265 ORTHO05D005175 1.9e-35 153.7 220 42.3
Lj2A1205T38 Lonicera japonica HOM05D004265 ORTHO05D005175 7.4e-35 151.8 181 48.1
COL.COLO4_05553 Corchorus olitorius HOM05D004265 ORTHO05D005175 9.6e-35 151.4 190 45.8
Dinv10100 Davidia involucrata HOM05D004265 ORTHO05D005175 1.3e-34 151.0 215 43.7
GSVIVG01019978001 Vitis vinifera HOM05D000618 ORTHO05D000454 2.8e-34 149.8 181 46.4
Solyc01g079460.2 Solanum lycopersicum HOM05D004265 ORTHO05D005175 4.8e-34 149.1 182 43.4
Sopen01g031230 Solanum pennellii HOM05D004265 ORTHO05D005175 6.2e-34 148.7 182 42.9
PGSC0003DMG400009008 Solanum tuberosum HOM05D004265 ORTHO05D005175 6.2e-34 148.7 181 43.1
Hma1.2p1_0486F.1_g163300 Hydrangea macrophylla HOM05D004265 ORTHO05D005175 2.4e-33 146.7 150 50.7
Pp3c20_10160 Physcomitrium patens HOM05D004265 ORTHO05D005175 5.3e-33 145.6 178 42.7
CAN.G100.73 Capsicum annuum HOM05D004265 ORTHO05D005175 1.5e-32 144.1 182 41.8
Nitab4.5_0003540g0020 Nicotiana tabacum HOM05D004265 ORTHO05D005175 9.9e-32 141.4 181 44.2
arahy.Tifrunner.gnm1.ann1.7KQ9VF Arachis hypogaea HOM05D004265 ORTHO05D005175 1.7e-31 140.6 220 36.4
arahy.Tifrunner.gnm1.ann1.K90Y16 Arachis hypogaea HOM05D004265 ORTHO05D005175 1.7e-31 140.6 220 36.4
TAR362G0651 Trochodendron aralioides HOM05D004265 ORTHO05D005175 1.7e-31 140.6 187 44.4
CsaV3_2G007060 Cucumis sativus L. HOM05D004265 ORTHO05D005175 3.8e-31 139.4 180 45.0
Pp3c8_19980 Physcomitrium patens HOM05D004265 ORTHO05D005175 1.1e-30 137.9 182 38.5
SalBow2G0857 Salvia bowleyana HOM05D004265 ORTHO05D005175 2.8e-26 123.2 181 38.7
DCAR_018300 Daucus carota HOM05D004265 ORTHO05D005175 2.6e-24 116.7 201 36.8
Peaxi162Scf00691g00218 Petunia axillaris HOM05D004265 ORTHO05D005175 3.4e-24 116.3 152 41.4
CDE05G2260 Ceratophyllum demersum HOM05D004265 ORTHO05D005175 2.2e-23 113.6 147 44.9
Nitab4.5_0008277g0030 Nicotiana tabacum HOM05D004265 ORTHO05D005175 4.9e-23 112.5 151 41.1
Lsat_1_v5_gn_7_81020 Lactuca sativa HOM05D004265 ORTHO05D005175 1.5e-19 100.9 90 54.4
QL03p013641 Quercus lobata HOM05D004265 ORTHO05D005175 2.4e-17 93.6 71 70.4
Lsat_1_v5_gn_6_35861 Lactuca sativa HOM05D004265 ORTHO05D005175 8.5e-15 85.1 63 58.7
Thecc.01G291900 Theobroma cacao HOM05D004265 ORTHO05D005175 9.4e-14 81.6 54 70.4
Lsat_1_v5_gn_9_123981 Lactuca sativa HOM05D001336 ORTHO05D001211 1.6e-13 80.9 63 58.7
arahy.Tifrunner.gnm1.ann1.F5CMD4 Arachis hypogaea HOM05D004265 ORTHO05D005175 3.0e-12 76.6 159 31.4
CiPaw.14G122500 Carya illinoinensis HOM05D002542 ORTHO05D012505 5.1e-12 75.9 97 46.4
CiPaw.14G122400 Carya illinoinensis HOM05D004265 ORTHO05D005175 2.2e-10 70.5 67 59.7
Duzib133G1105 Durio zibethinus HOM05D004265 ORTHO05D045180 5.0e-07 59.3 198 24.2


User provided reference genes

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