Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_32.g11745 Utricularia gibba HOM05D001921 ORTHO05D001784 2.0e-89 332.4 171 100.0
unitig_748.g8567 Utricularia gibba HOM05D001921 ORTHO05D001784 1.7e-64 249.6 172 78.5
Nitab4.5_0002295g0070 Nicotiana tabacum HOM05D001921 ORTHO05D001784 7.9e-25 117.9 178 44.9
SGA_v2.0_scaffold142G35647 Striga asiatica HOM05D001921 ORTHO05D001784 1.3e-24 117.1 211 40.8
Nitab4.5_0009936g0010 Nicotiana tabacum HOM05D001921 ORTHO05D001784 3.9e-24 115.5 178 45.5
Oeu022233.1 Olea europaea HOM05D001921 ORTHO05D001784 1.1e-23 114.0 201 40.8
Oeu032694.1 Olea europaea HOM05D001921 ORTHO05D001784 1.9e-23 113.2 202 38.6
PGSC0003DMG400030765 Solanum tuberosum HOM05D001921 ORTHO05D001784 9.6e-23 110.9 191 44.0
Oeu037657.1 Olea europaea HOM05D001921 ORTHO05D001784 2.1e-22 109.8 209 43.1
Nitab4.5_0003070g0060 Nicotiana tabacum HOM05D001921 ORTHO05D001784 4.8e-22 108.6 183 47.0
Migut.G00240 Erythranthe guttata HOM05D001921 ORTHO05D001784 6.2e-22 108.2 207 42.0
PGSC0003DMG400032113 Solanum tuberosum HOM05D001921 ORTHO05D001784 1.1e-21 107.5 212 41.0
SGA_v2.0_scaffold57G20294 Striga asiatica HOM05D001921 ORTHO05D001784 1.1e-21 107.5 209 40.7
Sopen06g019540 Solanum pennellii HOM05D001921 ORTHO05D001784 3.1e-21 105.9 191 42.9
CAN.G889.1 Capsicum annuum HOM05D001921 ORTHO05D001784 5.3e-21 105.1 212 40.6
Nitab4.5_0000059g0260 Nicotiana tabacum HOM05D001921 ORTHO05D001784 5.3e-21 105.1 182 44.0
Solyc06g054470.1 Solanum lycopersicum HOM05D001921 ORTHO05D001784 9.0e-21 104.4 191 42.4
Peaxi162Scf00769g00001 Petunia axillaris HOM05D001921 ORTHO05D001784 7.6e-20 101.3 173 45.1
Hma1.2p1_0643F.1_g194540 Hydrangea macrophylla HOM05D001921 ORTHO05D001784 1.7e-19 100.1 209 38.3
Sopen01g032320 Solanum pennellii HOM05D001921 ORTHO05D001784 1.7e-19 100.1 211 38.9
MSTRG.3970 Avicennia marina HOM05D001921 ORTHO05D001784 2.2e-19 99.8 203 41.4
CAN.G256.2 Capsicum annuum HOM05D001921 ORTHO05D001784 2.9e-19 99.4 196 42.9
Solyc01g080500.2 Solanum lycopersicum HOM05D001921 ORTHO05D001784 3.8e-19 99.0 212 38.7
SGA_v2.0_scaffold89G27578 Striga asiatica HOM05D001921 ORTHO05D001784 4.9e-19 98.6 181 44.2
Hma1.2p1_0511F.1_g169240 Hydrangea macrophylla HOM05D001921 ORTHO05D001784 3.2e-18 95.9 188 41.0
Prupe.1G145900 Prunus persica HOM05D001921 ORTHO05D001784 3.2e-18 95.9 193 40.9
Actinidia00069 Actinidia chinensis HOM05D001921 ORTHO05D001784 1.2e-17 94.0 190 39.5
ClCG06G005610 Citrullus lanatus HOM05D001921 ORTHO05D001784 3.5e-17 92.4 197 38.6
Migut.N00134 Erythranthe guttata HOM05D001921 ORTHO05D001784 3.0e-16 89.4 179 41.9
Lj6g0003156 Lotus japonicus HOM05D001921 ORTHO05D001784 5.1e-16 88.6 187 39.0
Lj6g0019677 Lotus japonicus HOM05D001921 ORTHO05D001784 5.1e-16 88.6 187 39.0
Cpa.g.sc16.79 Carica papaya HOM05D001921 ORTHO05D001784 6.7e-16 88.2 205 40.5
Sed0007577 Sechium edule HOM05D001921 ORTHO05D001784 1.1e-15 87.4 196 37.8
CiPaw.02G088800 Carya illinoinensis HOM05D001921 ORTHO05D001784 1.5e-15 87.0 202 40.1
Rhsim02G0016000 Rhododendron simsii HOM05D001921 ORTHO05D001784 1.9e-15 86.7 208 36.5
RcHm_v2.0_Chr4g0420321 Rosa chinensis HOM05D001921 ORTHO05D001784 1.9e-15 86.7 180 38.9
SalBow5G1185 Salvia bowleyana HOM05D001921 ORTHO05D001784 1.9e-15 86.7 176 37.5
SalBow5G3126 Salvia bowleyana HOM05D001921 ORTHO05D001784 1.9e-15 86.7 176 37.5
SalBow2G1161 Salvia bowleyana HOM05D001921 ORTHO05D001784 2.5e-15 86.3 119 47.1
CsaV3_6G005540 Cucumis sativus L. HOM05D001921 ORTHO05D001784 3.3e-15 85.9 201 37.8
Thecc.04G273300 Theobroma cacao HOM05D001921 ORTHO05D001784 3.3e-15 85.9 194 38.7
TAR636G3386 Trochodendron aralioides HOM05D001921 ORTHO05D001784 3.3e-15 85.9 176 37.5
Cfa015526 Carpinus fangiana HOM05D001921 ORTHO05D001784 4.3e-15 85.5 204 39.7
Gohir.A09G060900 Gossypium hirsutum HOM05D001921 ORTHO05D001784 4.3e-15 85.5 196 38.8
TAR362G1200 Trochodendron aralioides HOM05D001921 ORTHO05D001784 4.3e-15 85.5 186 38.2
Haze_01021 Corylus avellana HOM05D001921 ORTHO05D001784 5.7e-15 85.1 204 39.7
FAN22G2319 Fragaria x ananassa HOM05D001921 ORTHO05D001784 5.7e-15 85.1 179 38.5
MELO3C021383.2 Cucumis melo HOM05D001921 ORTHO05D001784 7.4e-15 84.7 201 36.8
Phvul.006G158900 Phaseolus vulgaris HOM05D001921 ORTHO05D001784 1.3e-14 84.0 182 40.1
TAR365G0872 Trochodendron aralioides HOM05D001921 ORTHO05D001784 1.3e-14 84.0 186 37.1
Manes.03G188600 Manihot esculenta HOM05D001921 ORTHO05D001784 1.6e-14 83.6 211 34.6
VMungo0540G1436 Vigna mungo HOM05D001921 ORTHO05D001784 1.6e-14 83.6 182 41.2
Ca_00585_v3 Cicer arietinum L. HOM05D001921 ORTHO05D001784 2.1e-14 83.2 193 37.3
Lalb_Chr18g0055871 Lupinus albus HOM05D001921 ORTHO05D001784 2.1e-14 83.2 186 36.6
Potri.010G027500 Populus trichocarpa HOM05D001921 ORTHO05D001784 2.1e-14 83.2 207 39.1
Actinidia32376 Actinidia chinensis HOM05D001921 ORTHO05D001784 2.8e-14 82.8 171 38.6
FvH4_4g16740 Fragaria vesca HOM05D001921 ORTHO05D001784 2.8e-14 82.8 179 37.4
FAN12G2234 Fragaria x ananassa HOM05D001921 ORTHO05D001784 2.8e-14 82.8 179 37.4
FAN12G3386 Fragaria x ananassa HOM05D001921 ORTHO05D001784 2.8e-14 82.8 179 37.4
Duzib212G0985 Durio zibethinus HOM05D001921 ORTHO05D001784 3.7e-14 82.4 196 38.8
DCAR_023282 Daucus carota HOM05D001921 ORTHO05D001784 4.8e-14 82.0 182 39.0
QL06p006408 Quercus lobata HOM05D001921 ORTHO05D001784 4.8e-14 82.0 205 38.0
FAN17G2860 Fragaria x ananassa HOM05D001921 ORTHO05D001784 6.2e-14 81.6 179 37.4
Gohir.D10G163601 Gossypium hirsutum HOM05D001921 ORTHO05D001784 6.2e-14 81.6 198 37.4
Gorai.011G182400 Gossypium raimondii HOM05D001921 ORTHO05D001784 6.2e-14 81.6 198 37.4
Gohir.D09G059900 Gossypium hirsutum HOM05D001921 ORTHO05D001784 1.1e-13 80.9 197 37.6
Gorai.006G074600 Gossypium raimondii HOM05D001921 ORTHO05D001784 1.1e-13 80.9 196 38.3
Manes.15G019800 Manihot esculenta HOM05D001921 ORTHO05D001784 1.4e-13 80.5 207 37.2
Gohir.A10G105100 Gossypium hirsutum HOM05D001921 ORTHO05D001784 1.8e-13 80.1 198 36.9
PGR031G1199 Punica granatum HOM05D001921 ORTHO05D001784 2.4e-13 79.7 189 38.6
THA.LOC104820224 Tarenaya hassleriana HOM05D001921 ORTHO05D001784 2.4e-13 79.7 178 39.9
CiPaw.01G156200 Carya illinoinensis HOM05D001921 ORTHO05D001784 4.1e-13 79.0 197 36.0
Peaxi162Scf00095g00034 Petunia axillaris HOM05D001921 ORTHO05D001784 6.9e-13 78.2 178 38.2
Sabra08G0162400 Salix brachista HOM05D001921 ORTHO05D001784 1.2e-12 77.4 217 32.7
TPR.G28126 Trifolium pratense HOM05D001921 ORTHO05D001784 2.0e-12 76.6 184 35.9
Duzib151G0850 Durio zibethinus HOM05D001921 ORTHO05D001784 2.6e-12 76.3 200 39.0
FAN07G0769 Fragaria x ananassa HOM05D001921 ORTHO05D001784 2.6e-12 76.3 181 35.4
Glyma.13G212500 Glycine max HOM05D001921 ORTHO05D001784 3.4e-12 75.9 190 36.3
arahy.Tifrunner.gnm1.ann1.XA6I97 Arachis hypogaea HOM05D001921 ORTHO05D001784 4.5e-12 75.5 205 34.1
CANSAT78G1722 Cannabis sativa HOM05D001921 ORTHO05D001784 4.5e-12 75.5 197 36.0
Sabra10G0013000 Salix brachista HOM05D001921 ORTHO05D001784 4.5e-12 75.5 206 35.9
Medtr2g020830 Medicago truncatula HOM05D001921 ORTHO05D001784 5.8e-12 75.1 201 34.8
Sed0022941 Sechium edule HOM05D001921 ORTHO05D001784 5.8e-12 75.1 172 39.5
arahy.Tifrunner.gnm1.ann1.288BMH Arachis hypogaea HOM05D001921 ORTHO05D001784 7.6e-12 74.7 202 34.7
DCAR_002429 Daucus carota HOM05D001921 ORTHO05D001784 7.6e-12 74.7 98 48.0
Lalb_Chr15g0087151 Lupinus albus HOM05D001921 ORTHO05D001784 1.0e-11 74.3 188 36.7
ATR0580G129 Amborella trichopoda HOM05D001921 ORTHO05D001784 1.3e-11 73.9 190 36.8
Glyma.15G100300 Glycine max HOM05D001921 ORTHO05D001784 1.3e-11 73.9 183 38.3
Aqoxy5G00575 Aquilegia oxysepala HOM05D001921 ORTHO05D001784 2.9e-11 72.8 174 33.9
MSTRG.24769 Avicennia marina HOM05D001921 ORTHO05D001784 2.9e-11 72.8 166 36.7
CAN.G1045.40 Capsicum annuum HOM05D001921 ORTHO05D001784 5.0e-11 72.0 175 36.0
DCAR_027127 Daucus carota HOM05D001921 ORTHO05D001784 5.0e-11 72.0 170 37.6
Nitab4.5_0002992g0090 Nicotiana tabacum HOM05D001921 ORTHO05D001784 5.0e-11 72.0 191 35.1
Psat1g185920 Pisum sativum HOM05D001921 ORTHO05D001784 8.4e-11 71.2 212 33.5
Potri.008G198000 Populus trichocarpa HOM05D001921 ORTHO05D001784 1.1e-10 70.9 216 35.6
Aqoxy2G03179 Aquilegia oxysepala HOM05D001921 ORTHO05D001784 1.4e-10 70.5 213 29.6
Aqoxy7G03512 Aquilegia oxysepala HOM05D001921 ORTHO05D001784 1.4e-10 70.5 206 31.1
DCAR_030578 Daucus carota HOM05D001921 ORTHO05D001784 1.4e-10 70.5 190 35.3
MBI18_g10965_MAGBIO Magnolia biondii HOM05D001921 ORTHO05D001784 1.9e-10 70.1 191 34.0
TPR.G18029 Trifolium pratense HOM05D001921 ORTHO05D001784 1.9e-10 70.1 211 32.7
HPP92_025281 Vanilla planifolia HOM05D001921 ORTHO05D001784 1.9e-10 70.1 182 35.2
Atru.chr4.2710 Acer truncatum HOM05D001921 ORTHO05D001784 2.5e-10 69.7 200 34.0
Nitab4.5_0009186g0010 Nicotiana tabacum HOM05D001921 ORTHO05D001784 2.5e-10 69.7 106 45.3
Ca_21561_v3 Cicer arietinum L. HOM05D001921 ORTHO05D001784 3.2e-10 69.3 174 36.2
Dinv42904 Davidia involucrata HOM05D001921 ORTHO05D001784 4.2e-10 68.9 183 38.3
Dinv43197 Davidia involucrata HOM05D001921 ORTHO05D001784 4.2e-10 68.9 183 38.3
Glyma.17G021000 Glycine max HOM05D001921 ORTHO05D001784 4.2e-10 68.9 190 34.2
Phvul.003G098700 Phaseolus vulgaris HOM05D001921 ORTHO05D001784 4.2e-10 68.9 191 34.6
Eucgr.H03650 Eucalyptus grandis HOM05D001921 ORTHO05D001784 5.5e-10 68.6 178 36.0
Nn2g12262 Nelumbo nucifera HOM05D001921 ORTHO05D001784 7.1e-10 68.2 186 33.9
CDE11G0807 Ceratophyllum demersum HOM05D001921 ORTHO05D001784 1.2e-09 67.4 185 33.5
Cfa020875 Carpinus fangiana HOM05D001921 ORTHO05D001784 1.6e-09 67.0 180 33.9
TWI63G0810 Tripterygium wilfordii HOM05D001921 ORTHO05D001784 2.7e-09 66.2 181 32.6
Nitab4.5_0001906g0010 Nicotiana tabacum HOM05D001921 ORTHO05D001784 3.5e-09 65.9 151 39.1
Dinv41418 Davidia involucrata HOM05D001921 ORTHO05D001784 7.9e-09 64.7 176 34.1
Hma1.2p1_0028F.1_g017215 Hydrangea macrophylla HOM05D001921 ORTHO05D001784 7.9e-09 64.7 183 35.5
Psat4g028640 Pisum sativum HOM05D001921 ORTHO05D001784 1.0e-08 64.3 174 33.9
Hma1.2p1_2976F.1_g331170 Hydrangea macrophylla HOM05D001921 ORTHO05D001784 1.3e-08 63.9 183 35.5
Haze_19306 Corylus avellana HOM05D001921 ORTHO05D001784 1.8e-08 63.5 188 34.0
Hma1.2p1_0228F.1_g096620 Hydrangea macrophylla HOM05D001921 ORTHO05D001784 1.8e-08 63.5 97 41.2
Rhsim02G0206800 Rhododendron simsii HOM05D001921 ORTHO05D001784 1.8e-08 63.5 171 36.3
TAR383G0606 Trochodendron aralioides HOM05D001921 ORTHO05D001784 1.8e-08 63.5 191 31.4
SabraUnG0005100 Salix brachista HOM05D001921 ORTHO05D001784 2.3e-08 63.2 133 37.6
VMungo1215G2840 Vigna mungo HOM05D001921 ORTHO05D001784 2.3e-08 63.2 188 34.0
Aa31LG8G8240 Aethionema arabicum HOM05D001921 ORTHO05D001784 5.1e-08 62.0 173 31.2
Lalb_Chr12g0196391 Lupinus albus HOM05D001921 ORTHO05D001784 5.1e-08 62.0 176 37.5
MBI19_g25275_MAGBIO Magnolia biondii HOM05D001921 ORTHO05D001784 6.7e-08 61.6 170 34.7
Sabra06G0203000 Salix brachista HOM05D001921 ORTHO05D001784 6.7e-08 61.6 133 36.8
Manes.06G040800 Manihot esculenta HOM05D001921 ORTHO05D001784 8.7e-08 61.2 134 39.6
PGR004G0777 Punica granatum HOM05D001921 ORTHO05D001784 8.7e-08 61.2 193 32.1
Rhsim03G0253600 Rhododendron simsii HOM05D001921 ORTHO05D001784 8.7e-08 61.2 119 42.0
Dinv03521 Davidia involucrata HOM05D001921 ORTHO05D001784 1.9e-07 60.1 181 33.1
Phvul.003G175500 Phaseolus vulgaris HOM05D001921 ORTHO05D001784 1.9e-07 60.1 187 33.2
Cc03_g02690 Coffea canephora HOM05D001921 ORTHO05D001784 2.5e-07 59.7 119 37.8
Glyma.07G253400 Glycine max HOM05D001921 ORTHO05D001784 2.5e-07 59.7 195 31.3
Lalb_Chr07g0179601 Lupinus albus HOM05D001921 ORTHO05D001784 2.5e-07 59.7 174 33.9
QL02p091546 Quercus lobata HOM05D001921 ORTHO05D001784 2.5e-07 59.7 196 30.6
Sp4g04350 Schrenkiella parvula HOM05D001921 ORTHO05D001784 2.5e-07 59.7 99 41.4
VMungo1215G1281 Vigna mungo HOM05D001921 ORTHO05D001784 2.5e-07 59.7 187 32.1
CAN.G142.1 Capsicum annuum HOM05D001921 ORTHO05D001784 3.3e-07 59.3 186 31.7
Ciclev10005894m.g Citrus clementina HOM05D001921 ORTHO05D001784 4.3e-07 58.9 207 31.4
Manes.16G126400 Manihot esculenta HOM05D001921 ORTHO05D001784 4.3e-07 58.9 192 32.8
HPP92_001333 Vanilla planifolia HOM05D001921 ORTHO05D001784 4.3e-07 58.9 115 39.1
Ciclev10009542m.g Citrus clementina HOM05D001921 ORTHO05D001784 5.7e-07 58.5 118 38.1
Cpa.g.sc46.103 Carica papaya HOM05D001921 ORTHO05D001784 7.4e-07 58.2 197 32.0
Eucgr.C02723 Eucalyptus grandis HOM05D001921 ORTHO05D001784 7.4e-07 58.2 114 38.6
Thecc.09G018900 Theobroma cacao HOM05D001921 ORTHO05D001784 7.4e-07 58.2 184 30.4
Sc15g0003760 Simmondsia chinensis HOM05D001921 ORTHO05D001784 9.7e-07 57.8 169 32.5
Prupe.7G253300 Prunus persica HOM05D001921 ORTHO05D001784 1.3e-06 57.4 154 34.4
Atru.chr7.2506 Acer truncatum HOM05D001921 ORTHO05D001784 1.6e-06 57.0 133 36.1
Medtr4g118490 Medicago truncatula HOM05D001921 ORTHO05D001784 1.6e-06 57.0 170 32.9
PSO782G1936 Papaver somniferum HOM05D001921 ORTHO05D001784 1.6e-06 57.0 152 34.2
TWI34G0586 Tripterygium wilfordii HOM05D001921 ORTHO05D001784 1.6e-06 57.0 181 34.8
Lsat_1_v5_gn_5_51861 Lactuca sativa HOM05D001921 ORTHO05D001784 2.2e-06 56.6 53 58.5
Ah.16g104850 Amaranthus hybridus HOM05D001921 ORTHO05D001784 2.8e-06 56.2 104 39.4
Duzib168G1630 Durio zibethinus HOM05D001921 ORTHO05D001784 2.8e-06 56.2 188 29.8
PGSC0003DMG401013517 Solanum tuberosum HOM05D001921 ORTHO05D001784 2.8e-06 56.2 98 40.8
TWI63G1839 Tripterygium wilfordii HOM05D001921 ORTHO05D001784 2.8e-06 56.2 112 41.1
Lj4g0019196 Lotus japonicus HOM05D001921 ORTHO05D001784 3.7e-06 55.8 202 30.7
TPR.G15777 Trifolium pratense HOM05D001921 ORTHO05D001784 3.7e-06 55.8 110 39.1
Oeu012641.1 Olea europaea HOM05D001921 ORTHO05D001784 4.8e-06 55.5 190 31.1
COL.COLO4_18922 Corchorus olitorius HOM05D001921 ORTHO05D001784 6.3e-06 55.1 195 28.2
ECA240G2556 Erigeron canadensis HOM05D001921 ORTHO05D001784 6.3e-06 55.1 55 61.8
Cpa.g.sc127.3 Carica papaya HOM05D001921 ORTHO05D001784 8.2e-06 54.7 189 30.2
Cfa013096 Carpinus fangiana HOM05D001921 ORTHO05D001784 8.2e-06 54.7 172 34.3
CiPaw.16G117000 Carya illinoinensis HOM05D001921 ORTHO05D001784 8.2e-06 54.7 167 34.1
RcHm_v2.0_Chr6g0297171 Rosa chinensis HOM05D014836 ORTHO05D001784 8.2e-06 54.7 198 31.8


User provided reference genes

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