Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_32.g11478 Utricularia gibba HOM05D006497 ORTHO05D008263 9.9e-65 250.0 127 100.0
Peaxi162Scf00840g00427 Petunia axillaris HOM05D006497 ORTHO05D008263 2.8e-35 152.1 111 70.3
Hma1.2p1_0049F.1_g028230 Hydrangea macrophylla HOM05D006497 ORTHO05D008263 6.2e-35 151.0 106 67.9
Actinidia18207 Actinidia chinensis HOM05D006497 ORTHO05D008263 8.1e-35 150.6 103 70.9
Migut.E01547 Erythranthe guttata HOM05D006497 ORTHO05D008263 1.1e-34 150.2 130 61.5
TAR636G3582 Trochodendron aralioides HOM05D006497 ORTHO05D008263 1.1e-34 150.2 107 70.1
Nitab4.5_0000318g0100 Nicotiana tabacum HOM05D006497 ORTHO05D008263 2.4e-34 149.1 108 68.5
CSS0028638 Camellia sinensis var. sinensis HOM05D006497 ORTHO05D008263 3.1e-34 148.7 107 67.3
Rhsim05G0006000 Rhododendron simsii HOM05D006497 ORTHO05D008263 5.3e-34 147.9 140 57.9
SalBow1G7152 Salvia bowleyana HOM05D006497 ORTHO05D008263 5.3e-34 147.9 135 57.8
CSS0007660 Camellia sinensis var. sinensis HOM05D006497 ORTHO05D008263 1.2e-33 146.7 107 66.4
CSS0049899 Camellia sinensis var. sinensis HOM05D006497 ORTHO05D008263 1.2e-33 146.7 107 66.4
Solyc07g063140.1 Solanum lycopersicum HOM05D006497 ORTHO05D008263 1.2e-33 146.7 111 68.5
GSVIVG01035327001 Vitis vinifera HOM05D006497 ORTHO05D008263 1.2e-33 146.7 104 66.3
Nitab4.5_0002021g0040 Nicotiana tabacum HOM05D006497 ORTHO05D008263 2.0e-33 146.0 114 67.5
Sopen07g031330 Solanum pennellii HOM05D006497 ORTHO05D008263 2.0e-33 146.0 105 69.5
MSTRG.11681 Avicennia marina HOM05D006497 ORTHO05D008263 2.6e-33 145.6 113 64.6
PSO210G2909 Papaver somniferum HOM05D006497 ORTHO05D008263 2.6e-33 145.6 107 68.2
PGSC0003DMG400012416 Solanum tuberosum HOM05D006497 ORTHO05D008263 2.6e-33 145.6 105 69.5
Nn8g39006 Nelumbo nucifera HOM05D006497 ORTHO05D008263 4.5e-33 144.8 106 68.9
CANSAT54G2618 Cannabis sativa HOM05D006497 ORTHO05D008263 7.6e-33 144.1 98 70.4
ECA246G5018 Erigeron canadensis HOM05D006497 ORTHO05D008263 7.6e-33 144.1 144 54.9
Migut.A00169 Erythranthe guttata HOM05D006497 ORTHO05D008263 1.7e-32 142.9 102 64.7
Potri.018G058200 Populus trichocarpa HOM05D006497 ORTHO05D008263 2.9e-32 142.1 98 66.3
CiPaw.08G027800 Carya illinoinensis HOM05D006497 ORTHO05D008263 4.9e-32 141.4 101 67.3
Lsat_1_v5_gn_3_27161 Lactuca sativa HOM05D006497 ORTHO05D008263 4.9e-32 141.4 104 65.4
QL12p040844 Quercus lobata HOM05D006497 ORTHO05D008263 1.1e-31 140.2 106 66.0
Ah.10g034670 Amaranthus hybridus HOM05D006497 ORTHO05D008263 1.4e-31 139.8 107 59.8
COL.COLO4_21011 Corchorus olitorius HOM05D006497 ORTHO05D008263 1.4e-31 139.8 99 65.7
PSO210G1815 Papaver somniferum HOM05D006497 ORTHO05D008263 1.9e-31 139.4 106 66.0
Sabra18G0054600 Salix brachista HOM05D006497 ORTHO05D008263 1.9e-31 139.4 98 66.3
Thecc.09G049300 Theobroma cacao HOM05D006497 ORTHO05D008263 2.4e-31 139.0 99 65.7
Atru.chr7.2042 Acer truncatum HOM05D006497 ORTHO05D008263 3.2e-31 138.7 98 69.4
Nn8g40951 Nelumbo nucifera HOM05D006497 ORTHO05D008263 4.2e-31 138.3 107 67.3
Eucgr.C00622 Eucalyptus grandis HOM05D006497 ORTHO05D008263 7.1e-31 137.5 97 67.0
ClCG11G014990 Citrullus lanatus HOM05D006497 ORTHO05D008263 9.3e-31 137.1 119 58.8
Duzib168G0301 Durio zibethinus HOM05D006497 ORTHO05D008263 1.2e-30 136.7 99 64.6
Cc08_g10030 Coffea canephora HOM05D006497 ORTHO05D008263 1.6e-30 136.3 101 63.4
PGR031G1870 Punica granatum HOM05D006497 ORTHO05D008263 1.6e-30 136.3 101 67.3
FvH4_2g35131 Fragaria vesca HOM05D006497 ORTHO05D008263 2.7e-30 135.6 118 56.8
Sc09g0009540 Simmondsia chinensis HOM05D006497 ORTHO05D008263 2.7e-30 135.6 124 54.0
Cpa.g.sc27.217 Carica papaya HOM05D006497 ORTHO05D008263 3.5e-30 135.2 96 68.8
MELO3C003479.2 Cucumis melo HOM05D006497 ORTHO05D008263 3.5e-30 135.2 100 66.0
EL10Ac2g03958 Beta vulgaris HOM05D006497 ORTHO05D008263 4.6e-30 134.8 117 59.0
CAN.G162.59 Capsicum annuum HOM05D006497 ORTHO05D008263 6.0e-30 134.4 109 62.4
Sed0025405 Sechium edule HOM05D006497 ORTHO05D008263 6.0e-30 134.4 100 64.0
Ciclev10009788m.g Citrus clementina HOM05D006497 ORTHO05D008263 7.9e-30 134.0 99 66.7
Prupe.1G443400 Prunus persica HOM05D006497 ORTHO05D008263 7.9e-30 134.0 96 66.7
Sed0009640 Sechium edule HOM05D006497 ORTHO05D008263 7.9e-30 134.0 100 63.0
AUR62040211 Chenopodium quinoa HOM05D006497 ORTHO05D008263 1.0e-29 133.7 117 54.7
Haze_01965 Corylus avellana HOM05D006497 ORTHO05D008263 1.0e-29 133.7 107 63.6
Gorai.001G024500 Gossypium raimondii HOM05D006497 ORTHO05D008263 1.3e-29 133.3 117 55.6
Cfa005390 Carpinus fangiana HOM05D006497 ORTHO05D008263 1.8e-29 132.9 107 63.6
FAN15G0473 Fragaria x ananassa HOM05D006497 ORTHO05D008263 1.8e-29 132.9 134 53.7
RcHm_v2.0_Chr6g0306821 Rosa chinensis HOM05D006497 ORTHO05D008263 1.8e-29 132.9 112 59.8
ATR0749G075 Amborella trichopoda HOM05D006497 ORTHO05D008263 3.0e-29 132.1 97 63.9
Aqoxy6G00985 Aquilegia oxysepala HOM05D006497 ORTHO05D008263 3.0e-29 132.1 98 66.3
CDE10G1018 Ceratophyllum demersum HOM05D006497 ORTHO05D008263 3.0e-29 132.1 111 57.7
Gohir.A07G022176 Gossypium hirsutum HOM05D006497 ORTHO05D008263 3.0e-29 132.1 117 55.6
Os03g0651000 Oryza sativa ssp. japonica HOM05D006497 ORTHO05D008263 3.0e-29 132.1 102 62.7
CsaV3_3G048400 Cucumis sativus L. HOM05D006497 ORTHO05D008263 3.9e-29 131.7 100 63.0
MD08G1108800 Malus domestica HOM05D006497 ORTHO05D008263 8.7e-29 130.6 95 64.2
ATR0304G027 Amborella trichopoda HOM05D006497 ORTHO05D008263 1.1e-28 130.2 94 66.0
THA.LOC104803742 Tarenaya hassleriana HOM05D006497 ORTHO05D008263 1.1e-28 130.2 101 59.4
AUR62009213 Chenopodium quinoa HOM05D006497 ORTHO05D008263 1.9e-28 129.4 108 59.3
DCAR_003057 Daucus carota HOM05D006497 ORTHO05D008263 1.9e-28 129.4 99 63.6
CDE10G0177 Ceratophyllum demersum HOM05D006497 ORTHO05D008263 4.3e-28 128.3 111 56.8
Zm00001eb218450 Zea mays HOM05D006497 ORTHO05D008263 5.6e-28 127.9 97 63.9
arahy.Tifrunner.gnm1.ann1.0Y6FKJ Arachis hypogaea HOM05D006497 ORTHO05D008263 1.3e-27 126.7 98 63.3
Oeu011793.1 Olea europaea HOM05D006497 ORTHO05D008263 2.8e-27 125.6 161 46.0
BcaB03g12770 Brassica carinata HOM05D006497 ORTHO05D008263 8.2e-27 124.0 98 60.2
Sp7g30690 Schrenkiella parvula HOM05D006497 ORTHO05D008263 1.4e-26 123.2 98 59.2
arahy.Tifrunner.gnm1.ann1.E0CW41 Arachis hypogaea HOM05D006497 ORTHO05D008263 3.1e-26 122.1 127 50.4
SGA_v2.0_scaffold163G38048 Striga asiatica HOM05D006497 ORTHO05D008263 3.1e-26 122.1 174 41.4
Thhalv10026449m.g Eutrema salsugineum HOM05D006497 ORTHO05D008263 9.0e-26 120.6 117 50.4
A08p17840 Brassica napus HOM05D006497 ORTHO05D008263 1.2e-25 120.2 98 58.2
C03p86910 Brassica napus HOM05D006497 ORTHO05D008263 1.2e-25 120.2 98 58.2
BolC3t20984H Brassica oleracea HOM05D006497 ORTHO05D008263 1.2e-25 120.2 98 58.2
BraA08t33734Z Brassica rapa HOM05D006497 ORTHO05D008263 2.0e-25 119.4 98 58.2
BcaNung02143 Brassica carinata HOM05D006497 ORTHO05D008263 4.5e-25 118.2 98 55.1
Ca_10596_v3 Cicer arietinum L. HOM05D006497 ORTHO05D008263 4.5e-25 118.2 98 57.1
Medtr1g095920 Medicago truncatula HOM05D006497 ORTHO05D008263 4.5e-25 118.2 98 59.2
Phvul.007G091500 Phaseolus vulgaris HOM05D006497 ORTHO05D008263 4.5e-25 118.2 98 59.2
AL7G18780 Arabidopsis lyrata HOM05D006497 ORTHO05D008263 7.6e-25 117.5 98 55.1
Lalb_Chr06g0162131 Lupinus albus HOM05D006497 ORTHO05D008263 7.6e-25 117.5 93 61.3
Carub.0007s0757 Capsella rubella HOM05D006497 ORTHO05D008263 1.0e-24 117.1 96 56.2
VMungo0720G1877 Vigna mungo HOM05D006497 ORTHO05D008263 1.0e-24 117.1 98 58.2
AT4G32915 Arabidopsis thaliana HOM05D006497 ORTHO05D008263 1.7e-24 116.3 98 55.1
Glyma.10G214200 Glycine max HOM05D006497 ORTHO05D008263 1.7e-24 116.3 98 57.1
TPR.G11934 Trifolium pratense HOM05D006497 ORTHO05D008263 1.7e-24 116.3 135 49.6
Glyma.20G177400 Glycine max HOM05D006497 ORTHO05D008263 2.2e-24 115.9 121 48.8
BolC7t46384H Brassica oleracea HOM05D006497 ORTHO05D008263 2.9e-24 115.5 93 55.9
CARHR240920 Cardamine hirsuta HOM05D006497 ORTHO05D008263 2.9e-24 115.5 98 56.1
Aa31LG2G18050 Aethionema arabicum HOM05D006497 ORTHO05D008263 4.9e-24 114.8 92 58.7
A03p61670 Brassica napus HOM05D006497 ORTHO05D008263 4.9e-24 114.8 132 43.2
BraA03t15206Z Brassica rapa HOM05D006497 ORTHO05D008263 4.9e-24 114.8 132 43.2
SEGI_35319 Sequoiadendron giganteum HOM05D006497 ORTHO05D008263 4.9e-24 114.8 109 53.2
Lj5g0021165 Lotus japonicus HOM05D006497 ORTHO05D008263 1.1e-23 113.6 98 55.1
Psat6g186080 Pisum sativum HOM05D006497 ORTHO05D008263 1.1e-23 113.6 98 56.1
HPP92_013944 Vanilla planifolia HOM05D006497 ORTHO05D008263 1.9e-23 112.8 119 49.6
C07p59400 Brassica napus HOM05D006497 ORTHO05D008263 3.2e-23 112.1 93 54.8
Hund19485 Selenicereus undatus HOM05D006497 ORTHO05D008263 4.2e-23 111.7 147 42.9
TPR.G1790 Trifolium pratense HOM05D006497 ORTHO05D008263 4.2e-23 111.7 96 57.3
SGA_v2.0_scaffold169G38673 Striga asiatica HOM05D006497 ORTHO05D008263 5.5e-23 111.3 104 54.8
HanXRQChr17g0538891 Helianthus annuus HOM05D006497 ORTHO05D008263 1.1e-20 103.6 80 63.8
TWI32G0413 Tripterygium wilfordii HOM05D006497 ORTHO05D008263 2.8e-19 99.0 73 68.5
MBI13_g05466_MAGBIO Magnolia biondii HOM05D006497 ORTHO05D008263 1.8e-18 96.3 62 72.6
FAN27G1249 Fragaria x ananassa HOM05D006497 ORTHO05D008263 3.1e-18 95.5 118 44.9
Mapoly0154s0030 Marchantia polymorpha HOM05D006497 ORTHO05D008263 5.3e-18 94.7 127 38.6
CBR_g31997 Chara braunii HOM05D006497 ORTHO05D008263 1.2e-17 93.6 101 49.5
Pp3c2_33430 Physcomitrium patens HOM05D006497 ORTHO05D008263 4.5e-17 91.7 109 41.3
arahy.Tifrunner.gnm1.ann1.2EH2S8 Arachis hypogaea HOM05D006497 ORTHO05D009640 1.0e-16 90.5 177 33.9
Dinv27945 Davidia involucrata HOM05D006497 ORTHO05D008263 2.9e-16 89.0 55 80.0
Cre08.g364650 Chlamydomonas reinhardtii HOM05D001184 ORTHO05D007940 5.0e-16 88.2 88 45.5
vmacro08276 Vaccinium macrocarpon HOM05D006497 ORTHO05D008263 5.0e-16 88.2 61 68.9
Manes.03G057500 Manihot esculenta HOM05D006497 ORTHO05D008263 1.4e-15 86.7 64 65.6
SMO146G0150 Selaginella moellendorffii HOM05D006497 ORTHO05D008263 1.9e-12 76.3 96 40.6
Gohir.D07G023800 Gossypium hirsutum HOM05D006497 ORTHO05D008263 8.2e-11 70.9 68 52.9
MCO07G547 Micromonas commoda HOM05D001184 ORTHO05D007940 9.1e-10 67.4 95 41.1
Rhsim07G0144900 Rhododendron simsii HOM05D006497 ORTHO05D008263 1.9e-07 59.7 48 56.2
PRCOL_00005999 Prasinoderma coloniale HOM05D006497 ORTHO05D008263 4.2e-07 58.5 96 30.2


User provided reference genes

Program Settings