Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_32.g11370 Utricularia gibba HOM05D003543 ORTHO05D004112 5.3e-106 387.9 224 100.0
unitig_748.g7602 Utricularia gibba HOM05D003543 ORTHO05D004112 5.9e-81 304.7 206 80.6
Migut.M01414 Erythranthe guttata HOM05D003543 ORTHO05D004112 7.3e-63 244.6 218 69.3
MSTRG.7156 Avicennia marina HOM05D003543 ORTHO05D004112 1.6e-62 243.4 217 66.4
MSTRG.16032 Avicennia marina HOM05D003543 ORTHO05D004112 8.4e-59 231.1 217 64.1
SGA_v2.0_scaffold4G01862 Striga asiatica HOM05D003543 ORTHO05D004112 4.1e-58 228.8 220 68.2
SGA_v2.0_scaffold7G03732 Striga asiatica HOM05D003543 ORTHO05D004112 5.4e-58 228.4 217 68.7
SalBow8G1766 Salvia bowleyana HOM05D003543 ORTHO05D004112 4.3e-55 218.8 198 66.7
Oeu022953.1 Olea europaea HOM05D003543 ORTHO05D004112 2.8e-54 216.1 217 62.2
Migut.H01613 Erythranthe guttata HOM05D003543 ORTHO05D004112 4.0e-53 212.2 218 59.2
Oeu030109.1 Olea europaea HOM05D003543 ORTHO05D004112 2.6e-52 209.5 217 60.4
SGA_v2.0_scaffold7G03734 Striga asiatica HOM05D003543 ORTHO05D004112 3.8e-51 205.7 175 69.1
CSS0010074 Camellia sinensis var. sinensis HOM05D003543 ORTHO05D004112 1.1e-50 204.1 214 56.5
Solyc11g012440.1 Solanum lycopersicum HOM05D003543 ORTHO05D004112 3.2e-50 202.6 212 60.8
Dinv05019 Davidia involucrata HOM05D003543 ORTHO05D004112 5.4e-50 201.8 217 60.8
PGSC0003DMG400013286 Solanum tuberosum HOM05D003543 ORTHO05D004112 5.4e-50 201.8 211 61.6
Sopen11g007180 Solanum pennellii HOM05D003543 ORTHO05D004112 9.3e-50 201.1 212 61.3
MD10G1335100 Malus domestica HOM05D003543 ORTHO05D004112 4.6e-49 198.7 214 56.5
MD05G1359600 Malus domestica HOM05D003543 ORTHO05D004112 3.0e-48 196.1 214 56.5
RcHm_v2.0_Chr5g0001011 Rosa chinensis HOM05D003543 ORTHO05D004112 5.1e-48 195.3 214 55.6
CSS0020081 Camellia sinensis var. sinensis HOM05D003543 ORTHO05D004112 6.6e-48 194.9 219 52.5
SGA_v2.0_scaffold89G27513 Striga asiatica HOM05D003543 ORTHO05D004112 1.1e-47 194.1 210 60.0
FvH4_3g00770 Fragaria vesca HOM05D003543 ORTHO05D004112 1.9e-47 193.4 214 56.1
FAN25G1985 Fragaria x ananassa HOM05D003543 ORTHO05D004112 1.9e-47 193.4 214 56.5
FAN21G0242 Fragaria x ananassa HOM05D003543 ORTHO05D004112 2.5e-47 193.0 215 55.3
Hma1.2p1_0657F.1_g197030 Hydrangea macrophylla HOM05D003543 ORTHO05D004112 2.5e-47 193.0 216 60.6
BraA03t14083Z Brassica rapa HOM05D003543 ORTHO05D004112 3.3e-47 192.6 214 56.1
CANSAT56G0448 Cannabis sativa HOM05D003543 ORTHO05D004112 4.3e-47 192.2 210 56.7
Prupe.4G008500 Prunus persica HOM05D003543 ORTHO05D004112 7.3e-47 191.4 214 55.1
COL.COLO4_31904 Corchorus olitorius HOM05D003543 ORTHO05D004112 9.6e-47 191.0 221 57.0
Atru.chr1.2368 Acer truncatum HOM05D003543 ORTHO05D004112 1.6e-46 190.3 220 54.1
MSTRG.14606 Avicennia marina HOM05D003543 ORTHO05D004112 1.6e-46 190.3 218 54.1
Cpa.g.sc75.99 Carica papaya HOM05D003543 ORTHO05D004112 2.1e-46 189.9 219 55.3
Ciclev10018015m.g Citrus clementina HOM05D003543 ORTHO05D004112 2.1e-46 189.9 221 54.3
TWI63G1747 Tripterygium wilfordii HOM05D003543 ORTHO05D004112 2.1e-46 189.9 216 54.6
C01p26290 Brassica napus HOM05D003543 ORTHO05D004112 2.8e-46 189.5 216 52.8
BolC1t02576H Brassica oleracea HOM05D003543 ORTHO05D004112 2.8e-46 189.5 216 52.8
Gohir.D06G161100 Gossypium hirsutum HOM05D003543 ORTHO05D004112 2.8e-46 189.5 219 54.3
Gorai.010G188000 Gossypium raimondii HOM05D003543 ORTHO05D004112 2.8e-46 189.5 219 54.3
Manes.08G070984 Manihot esculenta HOM05D003543 ORTHO05D004112 2.8e-46 189.5 220 53.2
MELO3C007441.2 Cucumis melo HOM05D003543 ORTHO05D004112 3.6e-46 189.1 226 54.0
CsaV3_6G048440 Cucumis sativus L. HOM05D003543 ORTHO05D004112 3.6e-46 189.1 226 54.0
PGSC0003DMG400023602 Solanum tuberosum HOM05D003543 ORTHO05D004112 3.6e-46 189.1 211 61.1
Aa31LG9G12240 Aethionema arabicum HOM05D003543 ORTHO05D004112 4.8e-46 188.7 222 53.6
A01p21010 Brassica napus HOM05D003543 ORTHO05D004112 4.8e-46 188.7 219 52.1
BraA01t02016Z Brassica rapa HOM05D003543 ORTHO05D004112 4.8e-46 188.7 219 52.1
Duzib235G1522 Durio zibethinus HOM05D003543 ORTHO05D004112 4.8e-46 188.7 219 54.3
PGR004G1420 Punica granatum HOM05D003543 ORTHO05D004112 4.8e-46 188.7 179 61.5
Sed0004311 Sechium edule HOM05D003543 ORTHO05D004112 4.8e-46 188.7 230 53.0
BcaC09g50355 Brassica carinata HOM05D003543 ORTHO05D004112 8.1e-46 188.0 219 52.1
Lj1A1241T70 Lonicera japonica HOM05D003543 ORTHO05D004112 8.1e-46 188.0 216 53.7
Lj6g0020811 Lotus japonicus HOM05D003543 ORTHO05D004112 8.1e-46 188.0 214 56.1
Thecc.06G235100 Theobroma cacao HOM05D003543 ORTHO05D004112 8.1e-46 188.0 224 55.8
Actinidia02307 Actinidia chinensis HOM05D003543 ORTHO05D004112 1.1e-45 187.6 222 54.1
Duzib192G0760 Durio zibethinus HOM05D003543 ORTHO05D004112 1.4e-45 187.2 219 53.9
THA.LOC104813330 Tarenaya hassleriana HOM05D003543 ORTHO05D004112 1.8e-45 186.8 192 61.5
A03p49880 Brassica napus HOM05D003543 ORTHO05D004112 2.4e-45 186.4 214 54.2
BolC7t45317H Brassica oleracea HOM05D003543 ORTHO05D004112 2.4e-45 186.4 214 54.7
CARHR222890 Cardamine hirsuta HOM05D003543 ORTHO05D004112 2.4e-45 186.4 224 53.1
Nitab4.5_0003626g0080 Nicotiana tabacum HOM05D003543 ORTHO05D004112 2.4e-45 186.4 225 56.9
BcaNung00189 Brassica carinata HOM05D003543 ORTHO05D004112 5.3e-45 185.3 222 52.3
Cc09_g00700 Coffea canephora HOM05D003543 ORTHO05D004112 5.3e-45 185.3 232 55.2
Gohir.A06G154400 Gossypium hirsutum HOM05D003543 ORTHO05D004112 5.3e-45 185.3 221 54.8
Oeu002770.1 Olea europaea HOM05D003543 ORTHO05D004112 5.3e-45 185.3 217 56.2
CAN.G696.20 Capsicum annuum HOM05D003543 ORTHO05D004112 6.9e-45 184.9 225 52.9
THA.LOC104815484 Tarenaya hassleriana HOM05D003543 ORTHO05D004112 6.9e-45 184.9 220 56.8
Glyma.15G115800 Glycine max HOM05D003543 ORTHO05D004112 9.0e-45 184.5 213 54.5
Phvul.006G142100 Phaseolus vulgaris HOM05D003543 ORTHO05D004112 9.0e-45 184.5 214 53.3
QL05p068721 Quercus lobata HOM05D003543 ORTHO05D004112 9.0e-45 184.5 223 52.9
Ca_00736_v3 Cicer arietinum L. HOM05D003543 ORTHO05D004112 1.2e-44 184.1 217 53.9
Eucgr.D01428 Eucalyptus grandis HOM05D003543 ORTHO05D004112 1.2e-44 184.1 228 53.5
Nitab4.5_0000143g0100 Nicotiana tabacum HOM05D003543 ORTHO05D004112 1.2e-44 184.1 223 52.9
QL05p069094 Quercus lobata HOM05D003543 ORTHO05D004112 1.2e-44 184.1 223 52.9
Peaxi162Scf00352g00096 Petunia axillaris HOM05D003543 ORTHO05D004112 1.5e-44 183.7 215 54.9
Glyma.09G011300 Glycine max HOM05D003543 ORTHO05D004112 2.0e-44 183.3 216 54.6
VMungo0540G1194 Vigna mungo HOM05D003543 ORTHO05D004112 2.0e-44 183.3 214 54.2
BcaC06g33483 Brassica carinata HOM05D003543 ORTHO05D004112 2.6e-44 183.0 213 54.5
ClCG01G021420 Citrullus lanatus HOM05D003543 ORTHO05D004112 2.6e-44 183.0 223 54.3
Sopen04g006940 Solanum pennellii HOM05D003543 ORTHO05D004112 3.4e-44 182.6 211 61.6
Aa31LG2G12560 Aethionema arabicum HOM05D003543 ORTHO05D004112 4.4e-44 182.2 223 52.0
Medtr2g026130 Medicago truncatula HOM05D003543 ORTHO05D004112 4.4e-44 182.2 218 53.7
BcaNung02874 Brassica carinata HOM05D003543 ORTHO05D004112 5.8e-44 181.8 214 54.2
C07p47940 Brassica napus HOM05D003543 ORTHO05D004112 5.8e-44 181.8 214 54.2
Lalb_Chr20g0119331 Lupinus albus HOM05D003543 ORTHO05D004112 7.6e-44 181.4 207 52.2
Sp7g15040 Schrenkiella parvula HOM05D003543 ORTHO05D004112 9.9e-44 181.0 223 51.6
Dinv32066 Davidia involucrata HOM05D003543 ORTHO05D004112 1.3e-43 180.6 217 55.8
Lsat_1_v5_gn_7_13800 Lactuca sativa HOM05D003543 ORTHO05D004112 1.3e-43 180.6 221 51.6
Cfa000083 Carpinus fangiana HOM05D003543 ORTHO05D004112 2.2e-43 179.9 233 50.6
Lalb_Chr18g0057071 Lupinus albus HOM05D003543 ORTHO05D004112 2.2e-43 179.9 217 51.2
Solyc04g014810.3 Solanum lycopersicum HOM05D003543 ORTHO05D004112 2.2e-43 179.9 211 61.1
Thhalv10025098m.g Eutrema salsugineum HOM05D003543 ORTHO05D004112 3.8e-43 179.1 224 50.4
Psat1g174720 Pisum sativum HOM05D003543 ORTHO05D004112 3.8e-43 179.1 217 52.5
Potri.016G010800 Populus trichocarpa HOM05D003543 ORTHO05D004112 8.4e-43 177.9 232 51.3
Ah.14g087540 Amaranthus hybridus HOM05D003543 ORTHO05D004112 1.9e-42 176.8 237 51.1
TPR.G10581 Trifolium pratense HOM05D003543 ORTHO05D004112 1.9e-42 176.8 216 52.8
Haze_06957 Corylus avellana HOM05D003543 ORTHO05D004112 2.4e-42 176.4 224 51.3
Gohir.A05G175100 Gossypium hirsutum HOM05D003543 ORTHO05D004112 3.2e-42 176.0 221 52.5
Rhsim13G0144100 Rhododendron simsii HOM05D003543 ORTHO05D004112 3.2e-42 176.0 209 52.2
CSS0034148 Camellia sinensis var. sinensis HOM05D003543 ORTHO05D004112 4.2e-42 175.6 214 50.9
DCAR_004899 Daucus carota HOM05D003543 ORTHO05D004112 4.2e-42 175.6 216 52.8
Lj2A260T84 Lonicera japonica HOM05D003543 ORTHO05D004112 5.4e-42 175.3 216 52.3
Sabra16G0014300 Salix brachista HOM05D003543 ORTHO05D004112 5.4e-42 175.3 226 52.2
MD07G1107900 Malus domestica HOM05D003543 ORTHO05D004112 1.2e-41 174.1 154 64.3
PGR042G2126 Punica granatum HOM05D003543 ORTHO05D004112 1.2e-41 174.1 228 50.4
vmacro03632 Vaccinium macrocarpon HOM05D003543 ORTHO05D004112 1.2e-41 174.1 223 50.2
arahy.Tifrunner.gnm1.ann1.09PW0C Arachis hypogaea HOM05D003543 ORTHO05D004112 3.5e-41 172.6 220 52.3
arahy.Tifrunner.gnm1.ann1.ZLF8NQ Arachis hypogaea HOM05D003543 ORTHO05D004112 3.5e-41 172.6 220 52.3
Duzib160G0009 Durio zibethinus HOM05D003543 ORTHO05D004112 3.5e-41 172.6 226 51.8
CiPaw.09G104000 Carya illinoinensis HOM05D003543 ORTHO05D004112 6.0e-41 171.8 220 51.4
Lsat_1_v5_gn_4_63420 Lactuca sativa HOM05D003543 ORTHO05D004112 6.0e-41 171.8 227 49.8
Gorai.009G183500 Gossypium raimondii HOM05D003543 ORTHO05D004112 7.9e-41 171.4 218 53.2
Sed0014537 Sechium edule HOM05D003543 ORTHO05D004112 7.9e-41 171.4 230 50.0
Sabra06G0010600 Salix brachista HOM05D003543 ORTHO05D004112 1.0e-40 171.0 237 51.1
TAR626G1558 Trochodendron aralioides HOM05D003543 ORTHO05D004112 2.3e-40 169.9 212 50.5
Oeu047063.1 Olea europaea HOM05D003543 ORTHO05D004112 3.0e-40 169.5 215 53.0
EL10Ac8g20219 Beta vulgaris HOM05D003543 ORTHO05D004112 3.9e-40 169.1 218 48.6
Gohir.D05G178100 Gossypium hirsutum HOM05D003543 ORTHO05D004112 3.9e-40 169.1 218 52.8
Potri.006G015100 Populus trichocarpa HOM05D003543 ORTHO05D004112 3.9e-40 169.1 237 50.6
Ah.09g234170 Amaranthus hybridus HOM05D003543 ORTHO05D004112 3.3e-39 166.0 220 50.0
AT4G16490 Arabidopsis thaliana HOM05D003543 ORTHO05D004112 9.6e-39 164.5 224 47.3
AL7G38470 Arabidopsis lyrata HOM05D003543 ORTHO05D004112 1.3e-38 164.1 224 47.3
TAR631G0001 Trochodendron aralioides HOM05D003543 ORTHO05D004112 1.3e-38 164.1 216 49.1
Carub.0007s2501 Capsella rubella HOM05D003543 ORTHO05D004112 1.6e-38 163.7 220 47.7
TWI38G1278 Tripterygium wilfordii HOM05D003543 ORTHO05D004112 2.8e-38 162.9 174 58.0
CiPaw.10G079000 Carya illinoinensis HOM05D003543 ORTHO05D004112 4.8e-38 162.2 222 50.0
VMungo1215G1690 Vigna mungo HOM05D003543 ORTHO05D004112 8.1e-38 161.4 179 58.7
HanXRQChr16g0517001 Helianthus annuus HOM05D003543 ORTHO05D004112 1.8e-37 160.2 223 48.0
Actinidia04652 Actinidia chinensis HOM05D003543 ORTHO05D004112 4.0e-37 159.1 145 62.1
Nn1g07428 Nelumbo nucifera HOM05D003543 ORTHO05D004112 9.0e-37 157.9 223 48.0
Phvul.003G084700 Phaseolus vulgaris HOM05D003543 ORTHO05D004112 9.0e-37 157.9 179 59.2
Sc05g0009680 Simmondsia chinensis HOM05D003543 ORTHO05D004112 2.6e-36 156.4 232 46.1
Glyma.07G266400 Glycine max HOM05D003543 ORTHO05D004112 9.9e-36 154.5 177 56.5
ECA234G1693 Erigeron canadensis HOM05D003543 ORTHO05D004112 1.7e-35 153.7 219 47.5
TAR629G3525 Trochodendron aralioides HOM05D003543 ORTHO05D004112 2.2e-35 153.3 217 47.9
Glyma.17G007900 Glycine max HOM05D003543 ORTHO05D004112 2.9e-35 152.9 171 55.6
Hund23399 Selenicereus undatus HOM05D003543 ORTHO05D004112 1.1e-34 151.0 200 53.0
HanXRQChr17g0559481 Helianthus annuus HOM05D003543 ORTHO05D004112 1.4e-34 150.6 228 46.5
Nn1g03263 Nelumbo nucifera HOM05D003543 ORTHO05D004112 2.7e-33 146.4 187 49.2
HanXRQChr04g0094851 Helianthus annuus HOM05D003543 ORTHO05D004112 1.8e-32 143.7 228 46.9
HanXRQChr14g0451341 Helianthus annuus HOM05D003543 ORTHO05D004112 3.9e-32 142.5 228 47.8
Aqoxy4G02200 Aquilegia oxysepala HOM05D003543 ORTHO05D004112 4.3e-31 139.0 220 42.3
AUR62021839 Chenopodium quinoa HOM05D003543 ORTHO05D004112 5.6e-31 138.7 141 56.7
Peaxi162Scf00520g00221 Petunia axillaris HOM05D003543 ORTHO05D004112 1.3e-30 137.5 209 46.9
AUR62012814 Chenopodium quinoa HOM05D003543 ORTHO05D004112 1.6e-30 137.1 141 56.0
CAN.G1263.22 Capsicum annuum HOM05D003543 ORTHO05D004112 6.5e-27 125.2 193 45.1
HanXRQChr09g0254301 Helianthus annuus HOM05D003543 ORTHO05D004112 4.2e-26 122.5 228 42.5
PSO541G5465 Papaver somniferum HOM05D003543 ORTHO05D004112 6.0e-25 118.6 213 43.2
MD11G1170200 Malus domestica HOM05D003543 ORTHO05D004112 3.9e-24 115.9 136 53.7
Sc24g0000310 Simmondsia chinensis HOM05D003543 ORTHO05D004112 6.7e-24 115.2 212 42.0
PSO675G9394 Papaver somniferum HOM05D003543 ORTHO05D004112 1.9e-23 113.6 213 41.8
PSO781G0286 Papaver somniferum HOM05D003543 ORTHO05D004112 2.5e-23 113.2 188 42.0
CDE02G1583 Ceratophyllum demersum HOM05D003543 ORTHO05D004112 1.3e-22 110.9 230 38.3
HPP92_006094 Vanilla planifolia HOM05D003543 ORTHO05D004112 2.1e-22 110.2 187 43.3
PSO541G0019 Papaver somniferum HOM05D003543 ORTHO05D004112 1.4e-21 107.5 190 41.1
HanXRQChr09g0238241 Helianthus annuus HOM05D003543 ORTHO05D004112 2.2e-19 100.1 228 38.2
GSVIVG01006098001 Vitis vinifera HOM05D003543 ORTHO05D004112 2.2e-19 100.1 128 52.3
ATR0712G168 Amborella trichopoda HOM05D003543 ORTHO05D004112 4.2e-18 95.9 170 39.4
Aa31sc198G60 Aethionema arabicum HOM05D001086 ORTHO05D004112 2.1e-17 93.6 63 77.8
MBI16_g42305_MAGBIO Magnolia biondii HOM05D003543 ORTHO05D004112 3.6e-17 92.8 215 36.3
QL09p024268 Quercus lobata HOM05D000399 ORTHO05D000304 6.1e-17 92.0 100 54.0
CDE05G1329 Ceratophyllum demersum HOM05D003543 ORTHO05D004112 5.7e-15 85.5 164 38.4
Zm00001eb325810 Zea mays HOM05D030178 ORTHO05D004112 2.2e-14 83.6 200 36.0
Lsat_1_v5_gn_9_117501 Lactuca sativa HOM05D003543 ORTHO05D004112 6.3e-14 82.0 54 75.9
Nitab4.5_0004646g0090 Nicotiana tabacum HOM05D003543 ORTHO05D004112 1.1e-13 81.3 120 46.7
Zm00001eb107940 Zea mays HOM05D030178 ORTHO05D004112 3.1e-13 79.7 195 36.4
Lj4A116T83 Lonicera japonica HOM05D000952 ORTHO05D000757 3.8e-11 72.8 141 40.4
Nitab4.5_0001109g0090 Nicotiana tabacum HOM05D003543 ORTHO05D017182 2.7e-09 66.6 90 50.0
Nn3g16766 Nelumbo nucifera HOM05D003543 ORTHO05D004112 3.6e-09 66.2 81 48.1
QL08p006916 Quercus lobata HOM05D000399 ORTHO05D000304 1.8e-08 63.9 115 37.4
DCAR_030861 Daucus carota HOM05D003543 ORTHO05D004112 7.4e-07 58.5 54 57.4
VMungo0540G0026 Vigna mungo HOM05D003543 ORTHO05D432880 9.7e-07 58.2 53 54.7
Duzib264G0410 Durio zibethinus HOM05D001760 ORTHO05D001691 2.8e-06 56.6 186 28.5


User provided reference genes

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