Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_32.g11239 Utricularia gibba HOM05D004578 ORTHO05D005529 4.3e-112 407.9 192 100.0
unitig_32.g11237 Utricularia gibba HOM05D004578 ORTHO05D005529 1.2e-101 373.2 185 94.6
Migut.A00428 Erythranthe guttata HOM05D004578 ORTHO05D005529 7.6e-77 290.8 184 71.7
SalBow4G0906 Salvia bowleyana HOM05D004578 ORTHO05D005529 9.9e-77 290.4 184 69.6
MSTRG.25795 Avicennia marina HOM05D004578 ORTHO05D005529 6.4e-76 287.7 184 70.7
SGA_v2.0_scaffold193G40672 Striga asiatica HOM05D004578 ORTHO05D005529 2.5e-72 275.8 184 66.8
Peaxi162Scf00045g01734 Petunia axillaris HOM05D004578 ORTHO05D005529 3.3e-72 275.4 186 66.7
DCAR_000687 Daucus carota HOM05D004578 ORTHO05D005529 5.6e-72 274.6 184 69.6
Dinv04517 Davidia involucrata HOM05D004578 ORTHO05D005529 1.1e-70 270.4 188 68.1
Lj7P748T39 Lonicera japonica HOM05D004578 ORTHO05D005529 1.4e-70 270.0 184 67.4
Sopen08g002370 Solanum pennellii HOM05D004578 ORTHO05D005529 3.1e-70 268.9 186 65.1
Nitab4.5_0000555g0200 Nicotiana tabacum HOM05D004578 ORTHO05D005529 2.0e-69 266.2 186 65.1
Nitab4.5_0004131g0050 Nicotiana tabacum HOM05D004578 ORTHO05D005529 4.5e-69 265.0 186 66.1
CAN.G673.19 Capsicum annuum HOM05D004578 ORTHO05D005529 5.8e-69 264.6 186 65.1
Solyc08g006430.4 Solanum lycopersicum HOM05D004578 ORTHO05D005529 7.6e-69 264.2 186 64.0
PGSC0003DMG400026320 Solanum tuberosum HOM05D004578 ORTHO05D005529 1.0e-68 263.8 186 62.9
Cc08_g06480 Coffea canephora HOM05D004578 ORTHO05D005529 4.9e-68 261.5 184 64.7
TWI32G0020 Tripterygium wilfordii HOM05D004578 ORTHO05D005529 1.1e-67 260.4 186 64.5
MBI16_g05839_MAGBIO Magnolia biondii HOM05D004578 ORTHO05D005529 2.5e-67 259.2 187 63.6
Eucgr.C04012 Eucalyptus grandis HOM05D004578 ORTHO05D005529 3.2e-67 258.8 186 64.5
Hund13109 Selenicereus undatus HOM05D004578 ORTHO05D005529 1.2e-66 256.9 186 60.8
Nn8g40733 Nelumbo nucifera HOM05D004578 ORTHO05D005529 2.1e-66 256.1 187 64.7
Sabra06G0211200 Salix brachista HOM05D004578 ORTHO05D005529 2.1e-66 256.1 186 63.4
vmacro18918 Vaccinium macrocarpon HOM05D004578 ORTHO05D005529 2.1e-66 256.1 186 62.4
QL12p025440 Quercus lobata HOM05D004578 ORTHO05D005529 2.7e-66 255.8 186 62.4
CANSAT25G1430 Cannabis sativa HOM05D004578 ORTHO05D005529 6.0e-66 254.6 186 60.8
VMungo1309G1783 Vigna mungo HOM05D004578 ORTHO05D005529 7.9e-66 254.2 185 61.1
MD15G1106400 Malus domestica HOM05D004578 ORTHO05D005529 1.8e-65 253.1 186 62.4
TAR625G0669 Trochodendron aralioides HOM05D004578 ORTHO05D005529 1.8e-65 253.1 186 61.8
Aqoxy7G02848 Aquilegia oxysepala HOM05D004578 ORTHO05D005529 2.3e-65 252.7 186 61.3
Ah.13g067790 Amaranthus hybridus HOM05D004578 ORTHO05D005529 3.9e-65 251.9 186 58.1
AUR62037713 Chenopodium quinoa HOM05D004578 ORTHO05D005529 3.9e-65 251.9 184 59.8
Actinidia06432 Actinidia chinensis HOM05D004578 ORTHO05D005529 5.1e-65 251.5 193 61.1
AUR62020290 Chenopodium quinoa HOM05D004578 ORTHO05D005529 6.7e-65 251.1 186 59.7
COL.COLO4_19019 Corchorus olitorius HOM05D004578 ORTHO05D005529 6.7e-65 251.1 186 61.3
Potri.006G272800 Populus trichocarpa HOM05D004578 ORTHO05D005529 8.7e-65 250.8 186 60.2
CiPaw.07G211300 Carya illinoinensis HOM05D004578 ORTHO05D005529 1.1e-64 250.4 187 61.5
AL4G15160 Arabidopsis lyrata HOM05D004578 ORTHO05D005529 1.5e-64 250.0 187 61.5
AT2G24580 Arabidopsis thaliana HOM05D004578 ORTHO05D005529 1.9e-64 249.6 189 62.4
Phvul.009G102000 Phaseolus vulgaris HOM05D004578 ORTHO05D005529 1.9e-64 249.6 185 60.0
Rhsim10G0084800 Rhododendron simsii HOM05D004578 ORTHO05D005529 1.9e-64 249.6 186 60.2
A04p18950 Brassica napus HOM05D004578 ORTHO05D005529 2.5e-64 249.2 187 61.0
BolC4t26970H Brassica oleracea HOM05D004578 ORTHO05D005529 2.5e-64 249.2 187 61.0
Thecc.09G008600 Theobroma cacao HOM05D004578 ORTHO05D005529 2.5e-64 249.2 186 60.8
ClCG05G026450 Citrullus lanatus HOM05D004578 ORTHO05D005529 3.3e-64 248.8 187 58.8
Duzib168G2341 Durio zibethinus HOM05D004578 ORTHO05D005529 3.3e-64 248.8 186 62.9
BraA04t17495Z Brassica rapa HOM05D004578 ORTHO05D005529 4.3e-64 248.4 187 61.0
Ciclev10008459m.g Citrus clementina HOM05D004578 ORTHO05D005529 4.3e-64 248.4 186 60.2
MELO3C003620.2 Cucumis melo HOM05D004578 ORTHO05D005529 4.3e-64 248.4 187 58.8
Eucgr.C04016 Eucalyptus grandis HOM05D004578 ORTHO05D005529 4.3e-64 248.4 186 60.8
Sp4g03570 Schrenkiella parvula HOM05D004578 ORTHO05D005529 4.3e-64 248.4 188 61.2
BcaC02g08438 Brassica carinata HOM05D004578 ORTHO05D005529 5.7e-64 248.1 187 61.0
C04p54190 Brassica napus HOM05D004578 ORTHO05D005529 5.7e-64 248.1 187 61.0
MD08G1126500 Malus domestica HOM05D004578 ORTHO05D005529 5.7e-64 248.1 186 60.8
Prupe.1G458600 Prunus persica HOM05D004578 ORTHO05D005529 5.7e-64 248.1 186 60.8
Potri.018G008700 Populus trichocarpa HOM05D004578 ORTHO05D005529 7.4e-64 247.7 186 62.4
Aa31sc715G30 Aethionema arabicum HOM05D004578 ORTHO05D005529 9.7e-64 247.3 187 61.0
Manes.16G134500 Manihot esculenta HOM05D004578 ORTHO05D005529 9.7e-64 247.3 186 60.2
QL12p025516 Quercus lobata HOM05D004578 ORTHO05D005529 9.7e-64 247.3 186 60.2
Carub.0004s0400 Capsella rubella HOM05D004578 ORTHO05D005529 1.3e-63 246.9 188 60.6
CARHR117360 Cardamine hirsuta HOM05D004578 ORTHO05D005529 1.3e-63 246.9 188 59.6
Thhalv10000150m.g Eutrema salsugineum HOM05D004578 ORTHO05D005529 1.3e-63 246.9 188 61.2
Gohir.A06G104800 Gossypium hirsutum HOM05D004578 ORTHO05D005529 1.3e-63 246.9 186 60.8
Sabra18G0013200 Salix brachista HOM05D004578 ORTHO05D005529 1.3e-63 246.9 186 61.3
Sabra18G0015700 Salix brachista HOM05D004578 ORTHO05D005529 1.3e-63 246.9 186 61.3
BcaB06g27986 Brassica carinata HOM05D004578 ORTHO05D005529 1.6e-63 246.5 185 61.1
CSS0030954 Camellia sinensis var. sinensis HOM05D004578 ORTHO05D005529 1.6e-63 246.5 187 61.5
Gohir.D06G107000 Gossypium hirsutum HOM05D004578 ORTHO05D005529 1.6e-63 246.5 186 60.8
Cfa013287 Carpinus fangiana HOM05D004578 ORTHO05D005529 2.2e-63 246.1 186 60.2
Haze_21761 Corylus avellana HOM05D004578 ORTHO05D005529 2.8e-63 245.7 186 60.8
TPR.G12360 Trifolium pratense HOM05D004578 ORTHO05D005529 2.8e-63 245.7 186 59.7
TPR.G12429 Trifolium pratense HOM05D004578 ORTHO05D005529 2.8e-63 245.7 185 58.9
PSO063G3790 Papaver somniferum HOM05D004578 ORTHO05D005529 3.7e-63 245.4 187 59.4
PGR044G1507 Punica granatum HOM05D004578 ORTHO05D005529 3.7e-63 245.4 190 61.1
ECA247G3559 Erigeron canadensis HOM05D004578 ORTHO05D005529 4.8e-63 245.0 197 60.9
Gorai.010G121600 Gossypium raimondii HOM05D004578 ORTHO05D005529 4.8e-63 245.0 186 60.2
FAN15G2443 Fragaria x ananassa HOM05D004578 ORTHO05D005529 6.3e-63 244.6 186 59.1
Prupe.1G458800 Prunus persica HOM05D004578 ORTHO05D005529 6.3e-63 244.6 186 60.2
Eucgr.C04014 Eucalyptus grandis HOM05D004578 ORTHO05D005529 1.1e-62 243.8 186 59.7
EL10Ac2g02417 Beta vulgaris HOM05D004578 ORTHO05D005529 1.4e-62 243.4 184 57.1
HanXRQChr10g0282951 Helianthus annuus HOM05D004578 ORTHO05D005529 1.4e-62 243.4 197 59.9
CsaV3_3G047160 Cucumis sativus L. HOM05D004578 ORTHO05D005529 1.8e-62 243.0 187 58.3
FvH4_2g36660 Fragaria vesca HOM05D004578 ORTHO05D005529 1.8e-62 243.0 186 58.1
FAN27G0985 Fragaria x ananassa HOM05D004578 ORTHO05D005529 2.4e-62 242.7 186 58.1
Lj1g0024454 Lotus japonicus HOM05D004578 ORTHO05D005529 2.4e-62 242.7 185 60.0
Aa31sc160G30 Aethionema arabicum HOM05D004578 ORTHO05D005529 3.1e-62 242.3 187 59.4
CiPaw.08G020700 Carya illinoinensis HOM05D004578 ORTHO05D005529 4.1e-62 241.9 186 59.7
FAN20G1103 Fragaria x ananassa HOM05D004578 ORTHO05D005529 4.1e-62 241.9 186 58.1
PSO170G4894 Papaver somniferum HOM05D004578 ORTHO05D005529 5.3e-62 241.5 187 58.8
Cfa013284 Carpinus fangiana HOM05D004578 ORTHO05D005529 6.9e-62 241.1 186 59.1
Manes.03G004800 Manihot esculenta HOM05D004578 ORTHO05D005529 6.9e-62 241.1 184 60.3
BcaC02g08437 Brassica carinata HOM05D004578 ORTHO05D005529 9.0e-62 240.7 182 61.0
Lsat_1_v5_gn_9_4341 Lactuca sativa HOM05D004578 ORTHO05D005529 9.0e-62 240.7 196 61.7
THA.LOC104819936 Tarenaya hassleriana HOM05D004578 ORTHO05D005529 9.0e-62 240.7 188 60.6
Cpa.g.sc23.31 Carica papaya HOM05D004578 ORTHO05D005529 1.2e-61 240.4 186 58.6
HanXRQChr15g0466441 Helianthus annuus HOM05D004578 ORTHO05D005529 1.5e-61 240.0 198 58.1
Ca_15652_v3 Cicer arietinum L. HOM05D004578 ORTHO05D005529 2.0e-61 239.6 184 58.2
Ca_15660_v3 Cicer arietinum L. HOM05D004578 ORTHO05D005529 2.0e-61 239.6 184 58.2
Sc07g0007360 Simmondsia chinensis HOM05D004578 ORTHO05D005529 2.0e-61 239.6 184 55.4
Prupe.1G458900 Prunus persica HOM05D004578 ORTHO05D005529 3.4e-61 238.8 193 58.5
TAR383G0560 Trochodendron aralioides HOM05D004578 ORTHO05D005529 3.4e-61 238.8 186 58.6
Glyma.04G076300 Glycine max HOM05D004578 ORTHO05D005529 4.5e-61 238.4 186 58.6
Ciclev10008463m.g Citrus clementina HOM05D004578 ORTHO05D005529 7.6e-61 237.7 186 58.1
Cc00_g13120 Coffea canephora HOM05D004578 ORTHO05D005529 1.3e-60 236.9 184 58.2
CDE02G4459 Ceratophyllum demersum HOM05D004578 ORTHO05D005529 1.7e-60 236.5 185 56.8
Medtr3g109010 Medicago truncatula HOM05D004578 ORTHO05D005529 1.7e-60 236.5 185 57.3
TAR383G1032 Trochodendron aralioides HOM05D004578 ORTHO05D005529 1.7e-60 236.5 184 58.2
Atru.chr7.2661 Acer truncatum HOM05D004578 ORTHO05D005529 2.2e-60 236.1 191 59.2
Cfa013283 Carpinus fangiana HOM05D004578 ORTHO05D005529 2.2e-60 236.1 186 57.0
Medtr3g108990 Medicago truncatula HOM05D004578 ORTHO05D005529 3.8e-60 235.3 185 56.8
Ca_15651_v3 Cicer arietinum L. HOM05D004578 ORTHO05D005529 6.5e-60 234.6 185 57.3
Ca_15659_v3 Cicer arietinum L. HOM05D004578 ORTHO05D005529 6.5e-60 234.6 185 57.3
Sed0023873 Sechium edule HOM05D004578 ORTHO05D005529 8.5e-60 234.2 186 59.1
MBI13_g34048_MAGBIO Magnolia biondii HOM05D004578 ORTHO05D005529 1.4e-59 233.4 187 60.4
arahy.Tifrunner.gnm1.ann1.M0AD1K Arachis hypogaea HOM05D004578 ORTHO05D005529 2.7e-58 229.2 189 56.1
Actinidia22261 Actinidia chinensis HOM05D004578 ORTHO05D005529 6.1e-58 228.0 175 61.1
arahy.Tifrunner.gnm1.ann1.W2ETIH Arachis hypogaea HOM05D004578 ORTHO05D005529 3.9e-57 225.3 189 55.6
ATR0626G173 Amborella trichopoda HOM05D004578 ORTHO05D005529 1.5e-56 223.4 187 54.0
Psat5g024080 Pisum sativum HOM05D004578 ORTHO05D005529 1.5e-56 223.4 185 53.5
Os09g0498500 Oryza sativa ssp. japonica HOM05D004578 ORTHO05D005529 5.7e-56 221.5 194 53.6
Os12g0543600 Oryza sativa ssp. japonica HOM05D004578 ORTHO05D005529 9.7e-56 220.7 191 54.5
Os01g0316100 Oryza sativa ssp. japonica HOM05D004578 ORTHO05D005529 1.1e-54 217.2 193 56.0
Zm00001eb127180 Zea mays HOM05D004578 ORTHO05D005529 1.1e-54 217.2 191 55.0
Zm00001eb317190 Zea mays HOM05D004578 ORTHO05D005529 9.1e-54 214.2 191 53.4
HPP92_017393 Vanilla planifolia HOM05D004578 ORTHO05D005529 1.3e-52 210.3 186 54.3
Zm00001eb340420 Zea mays HOM05D004578 ORTHO05D005529 1.1e-51 207.2 191 53.4
Lalb_Chr23g0269171 Lupinus albus HOM05D004578 ORTHO05D005529 1.9e-51 206.5 158 57.6
RcHm_v2.0_Chr6g0305131 Rosa chinensis HOM05D004578 ORTHO05D005529 4.7e-50 201.8 186 50.5
SEGI_31206 Sequoiadendron giganteum HOM05D004578 ORTHO05D005529 7.9e-50 201.1 191 47.1
SMO115G0125 Selaginella moellendorffii HOM05D004578 ORTHO05D005529 6.7e-49 198.0 187 49.2
Zm00001eb140430 Zea mays HOM05D004578 ORTHO05D005529 5.7e-48 194.9 191 50.8
Pp3c9_3640 Physcomitrium patens HOM05D004578 ORTHO05D005529 9.7e-48 194.1 192 47.4
SEGI_11947 Sequoiadendron giganteum HOM05D004578 ORTHO05D005529 2.8e-47 192.6 191 45.0
Cfa013285 Carpinus fangiana HOM05D004578 ORTHO05D005529 1.9e-43 179.9 157 52.9
Mapoly0152s0014 Marchantia polymorpha HOM05D004578 ORTHO05D005529 5.5e-43 178.3 185 45.9
AagrBONN_evm.TU.Sc2ySwM_368.3376 Anthoceros agrestis HOM05D004578 ORTHO05D005529 1.8e-41 173.3 186 43.5
Lalb_Chr11g0064181 Lupinus albus HOM05D004578 ORTHO05D005529 1.8e-41 173.3 184 43.5
HanXRQChr10g0282961 Helianthus annuus HOM05D004578 ORTHO05D005529 2.2e-36 156.4 145 53.1
Gohir.D06G106866 Gossypium hirsutum HOM05D004578 ORTHO05D005529 1.2e-34 150.6 154 48.7
Cc08_g06580 Coffea canephora HOM05D004578 ORTHO05D005529 5.3e-30 135.2 103 61.2
Gorai.010G121400 Gossypium raimondii HOM05D004578 ORTHO05D005529 1.2e-24 117.5 117 47.9
Oeu008773.1 Olea europaea HOM05D004578 ORTHO05D005529 3.4e-24 115.9 74 71.6
Oeu018556.1 Olea europaea HOM05D004578 ORTHO05D005529 1.4e-22 110.5 74 64.9
GSVIVG01033177001 Vitis vinifera HOM05D004578 ORTHO05D005529 1.6e-21 107.1 70 68.6
Actinidia22262 Actinidia chinensis HOM05D004578 ORTHO05D005529 3.8e-20 102.4 178 37.1
PRCOL_00000645 Prasinoderma coloniale HOM05D004578 ORTHO05D005529 3.6e-18 95.9 209 29.7
Hma1.2p1_1588F.1_g292320 Hydrangea macrophylla HOM05D004578 ORTHO05D005529 1.4e-17 94.0 127 42.5
Ca_28680_v3 Cicer arietinum L. HOM05D004578 ORTHO05D005529 1.9e-11 73.6 191 31.9
Psat5g025320 Pisum sativum HOM05D004578 ORTHO05D005529 8.0e-10 68.2 50 60.0
COL.COLO4_30024 Corchorus olitorius HOM05D004578 ORTHO05D005529 4.0e-09 65.9 39 76.9
unitig_748.g7722 Utricularia gibba HOM05D004578 ORTHO05D005529 3.7e-07 59.3 51 62.7
Psat2g052560 Pisum sativum HOM05D004790 ORTHO05D005678 6.4e-07 58.5 47 53.2


User provided reference genes

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