Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_32.g10979 Utricularia gibba HOM05D005438 ORTHO05D006744 2.2e-182 642.1 320 100.0
Migut.J01399 Erythranthe guttata HOM05D005438 ORTHO05D006744 2.4e-99 366.3 331 62.5
Migut.A00720 Erythranthe guttata HOM05D005438 ORTHO05D006744 1.1e-91 340.9 341 60.4
SGA_v2.0_scaffold173G39139 Striga asiatica HOM05D005438 ORTHO05D006744 3.1e-91 339.3 359 56.0
COL.COLO4_08362 Corchorus olitorius HOM05D005438 ORTHO05D006744 1.3e-89 334.0 329 56.8
FvH4_5g03190 Fragaria vesca HOM05D005438 ORTHO05D006744 7.2e-88 328.2 332 56.0
FAN18G2027 Fragaria x ananassa HOM05D005438 ORTHO05D006744 7.2e-88 328.2 332 56.0
CAN.G532.38 Capsicum annuum HOM05D005438 ORTHO05D006744 9.4e-88 327.8 329 55.6
Peaxi162Scf00074g01737 Petunia axillaris HOM05D005438 ORTHO05D006744 9.4e-88 327.8 329 57.1
Solyc08g081580.4 Solanum lycopersicum HOM05D005438 ORTHO05D006744 1.2e-87 327.4 327 56.3
FAN13G0364 Fragaria x ananassa HOM05D005438 ORTHO05D006744 2.7e-87 326.2 332 55.4
Thecc.03G286500 Theobroma cacao HOM05D005438 ORTHO05D006744 7.9e-87 324.7 329 56.8
FAN04G0810 Fragaria x ananassa HOM05D005438 ORTHO05D006744 1.0e-86 324.3 338 54.4
MD14G1111900 Malus domestica HOM05D005438 ORTHO05D006744 1.4e-86 323.9 328 55.2
FAN08G1515 Fragaria x ananassa HOM05D005438 ORTHO05D006744 3.0e-86 322.8 332 54.5
Nitab4.5_0003015g0090 Nicotiana tabacum HOM05D005438 ORTHO05D006744 3.0e-86 322.8 329 55.0
Prupe.5G106500 Prunus persica HOM05D005438 ORTHO05D006744 3.0e-86 322.8 332 55.1
Sopen08g029890 Solanum pennellii HOM05D005438 ORTHO05D006744 3.0e-86 322.8 329 55.0
RcHm_v2.0_Chr7g0196591 Rosa chinensis HOM05D005438 ORTHO05D006744 3.9e-86 322.4 334 55.4
PGSC0003DMG400012320 Solanum tuberosum HOM05D005438 ORTHO05D006744 3.9e-86 322.4 329 55.3
Duzib084G0802 Durio zibethinus HOM05D005438 ORTHO05D006744 8.8e-86 321.2 330 54.2
ECA233G5263 Erigeron canadensis HOM05D005438 ORTHO05D006744 2.0e-85 320.1 324 55.2
Gorai.008G250200 Gossypium raimondii HOM05D005438 ORTHO05D006744 3.3e-85 319.3 329 55.0
Ca_10950_v3 Cicer arietinum L. HOM05D005438 ORTHO05D006744 7.4e-85 318.2 328 55.2
Gohir.A02G105300 Gossypium hirsutum HOM05D005438 ORTHO05D006744 7.4e-85 318.2 330 55.5
Nitab4.5_0007906g0070 Nicotiana tabacum HOM05D005438 ORTHO05D006744 7.4e-85 318.2 329 54.4
Phvul.002G293100 Phaseolus vulgaris HOM05D005438 ORTHO05D006744 7.4e-85 318.2 328 53.7
Eucgr.D01812 Eucalyptus grandis HOM05D005438 ORTHO05D006744 1.3e-84 317.4 330 55.5
Glyma.08G018100 Glycine max HOM05D005438 ORTHO05D006744 1.3e-84 317.4 327 54.4
Gohir.D03G078500 Gossypium hirsutum HOM05D005438 ORTHO05D006744 1.3e-84 317.4 330 55.2
Medtr8g098940 Medicago truncatula HOM05D005438 ORTHO05D006744 1.3e-84 317.4 331 55.6
Eucgr.L02379 Eucalyptus grandis HOM05D005438 ORTHO05D006744 1.7e-84 317.0 330 55.5
Gohir.D12G233900 Gossypium hirsutum HOM05D005438 ORTHO05D006744 1.7e-84 317.0 329 54.7
Lalb_Chr05g0224491 Lupinus albus HOM05D005438 ORTHO05D006744 2.2e-84 316.6 324 55.9
arahy.Tifrunner.gnm1.ann1.Y7QUAU Arachis hypogaea HOM05D005438 ORTHO05D006744 2.8e-84 316.2 329 55.0
Ciclev10020644m.g Citrus clementina HOM05D005438 ORTHO05D006744 3.7e-84 315.8 335 54.6
GSVIVG01019417001 Vitis vinifera HOM05D005438 ORTHO05D006744 4.8e-84 315.5 330 55.5
Lj4g0011941 Lotus japonicus HOM05D005438 ORTHO05D006744 6.3e-84 315.1 336 53.3
Glyma.05G211800 Glycine max HOM05D005438 ORTHO05D006744 2.4e-83 313.2 327 54.1
Gorai.003G085600 Gossypium raimondii HOM05D005438 ORTHO05D006744 5.3e-83 312.0 331 55.0
Potri.003G132600 Populus trichocarpa HOM05D005438 ORTHO05D006744 6.9e-83 311.6 367 52.0
QL12p031793 Quercus lobata HOM05D005438 ORTHO05D006744 6.9e-83 311.6 361 51.8
Atru.chr9.2115 Acer truncatum HOM05D005438 ORTHO05D006744 9.1e-83 311.2 328 54.0
Dinv37597 Davidia involucrata HOM05D005438 ORTHO05D006744 9.1e-83 311.2 329 55.3
CiPaw.11G129800 Carya illinoinensis HOM05D005438 ORTHO05D006744 2.0e-82 310.1 331 53.2
Rhsim02G0235700 Rhododendron simsii HOM05D005438 ORTHO05D006744 2.6e-82 309.7 333 54.4
arahy.Tifrunner.gnm1.ann1.I29YTG Arachis hypogaea HOM05D005438 ORTHO05D006744 4.5e-82 308.9 329 54.4
Cc08_g15250 Coffea canephora HOM05D005438 ORTHO05D006744 4.5e-82 308.9 335 54.0
HanXRQChr02g0049721 Helianthus annuus HOM05D005438 ORTHO05D006744 5.9e-82 308.5 326 54.0
Sabra03G0095000 Salix brachista HOM05D005438 ORTHO05D006744 7.7e-82 308.1 366 50.8
Sed0027839 Sechium edule HOM05D005438 ORTHO05D006744 7.7e-82 308.1 329 53.2
VMungo0251G0328 Vigna mungo HOM05D005438 ORTHO05D006744 7.7e-82 308.1 328 52.4
Duzib205G0010 Durio zibethinus HOM05D005438 ORTHO05D006744 1.3e-81 307.4 330 55.2
TWI60G1446 Tripterygium wilfordii HOM05D005438 ORTHO05D006744 1.3e-81 307.4 329 53.2
Lsat_1_v5_gn_3_8761 Lactuca sativa HOM05D005438 ORTHO05D006744 1.7e-81 307.0 329 54.7
Actinidia10609 Actinidia chinensis HOM05D005438 ORTHO05D006744 8.5e-81 304.7 336 52.7
CANSAT21G0041 Cannabis sativa HOM05D005438 ORTHO05D006744 1.4e-80 303.9 335 53.4
AUR62019752 Chenopodium quinoa HOM05D005438 ORTHO05D006744 1.9e-80 303.5 330 51.8
PGR031G2565 Punica granatum HOM05D005438 ORTHO05D006744 2.5e-80 303.1 327 53.5
CsaV3_5G002390 Cucumis sativus L. HOM05D005438 ORTHO05D006744 4.2e-80 302.4 333 52.6
MELO3C005715.2 Cucumis melo HOM05D005438 ORTHO05D006744 7.2e-80 301.6 333 52.3
Hund11433 Selenicereus undatus HOM05D005438 ORTHO05D006744 7.2e-80 301.6 330 52.7
AUR62010754 Chenopodium quinoa HOM05D005438 ORTHO05D006744 9.4e-80 301.2 330 51.2
Psat7g029680 Pisum sativum HOM05D005438 ORTHO05D006744 1.6e-79 300.4 330 53.9
TPR.G12953 Trifolium pratense HOM05D005438 ORTHO05D006744 5.2e-78 295.4 333 52.6
Atru.BG.199.p Acer truncatum HOM05D005438 ORTHO05D006744 2.0e-77 293.5 326 51.8
Aa31LG2G1070 Aethionema arabicum HOM05D005438 ORTHO05D006744 3.3e-77 292.7 337 51.3
EL10Ac5g12834 Beta vulgaris HOM05D005438 ORTHO05D006744 7.4e-77 291.6 335 51.3
DCAR_004611 Daucus carota HOM05D005438 ORTHO05D006744 9.7e-77 291.2 326 50.9
TAR374G1319 Trochodendron aralioides HOM05D005438 ORTHO05D006744 9.7e-77 291.2 331 52.0
Sc01g0009850 Simmondsia chinensis HOM05D005438 ORTHO05D006744 2.2e-76 290.0 326 50.9
BcaC04g22661 Brassica carinata HOM05D005438 ORTHO05D006744 4.8e-76 288.9 276 56.5
Sp2g00710 Schrenkiella parvula HOM05D005438 ORTHO05D006744 4.8e-76 288.9 280 56.8
Manes.01G057900 Manihot esculenta HOM05D005438 ORTHO05D006744 6.3e-76 288.5 362 50.8
vmacro11410 Vaccinium macrocarpon HOM05D005438 ORTHO05D006744 6.3e-76 288.5 322 53.7
BcaB07g31422 Brassica carinata HOM05D005438 ORTHO05D006744 2.4e-75 286.6 350 49.7
THA.LOC104817794 Tarenaya hassleriana HOM05D005438 ORTHO05D006744 2.4e-75 286.6 333 51.7
A09p15160 Brassica napus HOM05D005438 ORTHO05D006744 3.1e-75 286.2 277 57.4
BcaB07g31532 Brassica carinata HOM05D005438 ORTHO05D006744 5.3e-75 285.4 279 58.4
A09p14060 Brassica napus HOM05D005438 ORTHO05D006744 5.3e-75 285.4 278 57.2
C09p18360 Brassica napus HOM05D005438 ORTHO05D006744 9.1e-75 284.6 277 57.0
MD06G1091000 Malus domestica HOM05D005438 ORTHO05D006744 9.1e-75 284.6 319 53.0
Carub.0002s0086 Capsella rubella HOM05D005438 ORTHO05D006744 1.2e-74 284.3 280 56.4
Lj2C178T12 Lonicera japonica HOM05D005438 ORTHO05D006744 1.2e-74 284.3 335 50.4
Aqoxy7G00195 Aquilegia oxysepala HOM05D005438 ORTHO05D006744 2.0e-74 283.5 342 49.7
BraA09t37158Z Brassica rapa HOM05D005438 ORTHO05D006744 2.0e-74 283.5 281 56.2
HanXRQChr17g0533211 Helianthus annuus HOM05D005438 ORTHO05D006744 2.0e-74 283.5 273 58.2
Ah.12g051920 Amaranthus hybridus HOM05D005438 ORTHO05D006744 2.6e-74 283.1 332 49.1
AT1G63980 Arabidopsis thaliana HOM05D005438 ORTHO05D006744 4.5e-74 282.3 281 54.8
Thhalv10023525m.g Eutrema salsugineum HOM05D005438 ORTHO05D006744 4.5e-74 282.3 336 49.4
BolC9t54592H Brassica oleracea HOM05D005438 ORTHO05D006744 1.3e-73 280.8 281 55.9
CSS0046697 Camellia sinensis var. sinensis HOM05D005438 ORTHO05D006744 2.2e-73 280.0 335 51.0
BraA09t37053Z Brassica rapa HOM05D005438 ORTHO05D006744 3.8e-73 279.3 284 55.3
AL2G11130 Arabidopsis lyrata HOM05D005438 ORTHO05D006744 5.0e-73 278.9 346 50.0
BolC9t54729H Brassica oleracea HOM05D005438 ORTHO05D006744 8.5e-73 278.1 283 55.8
C09p16950 Brassica napus HOM05D005438 ORTHO05D006744 1.9e-72 276.9 278 55.0
Nn1g01673 Nelumbo nucifera HOM05D005438 ORTHO05D006744 2.5e-72 276.6 351 47.9
ClCG01G002320 Citrullus lanatus HOM05D005438 ORTHO05D006744 3.2e-72 276.2 322 49.4
Gohir.A12G233400 Gossypium hirsutum HOM05D005438 ORTHO05D006744 3.2e-72 276.2 327 51.4
MBI11_g09068_MAGBIO Magnolia biondii HOM05D005438 ORTHO05D006744 7.2e-72 275.0 336 49.7
PSO017G3503 Papaver somniferum HOM05D005438 ORTHO05D006744 1.0e-70 271.2 348 48.0
PSO266G0069 Papaver somniferum HOM05D005438 ORTHO05D006744 1.0e-70 271.2 348 49.1
PSO478G3903 Papaver somniferum HOM05D005438 ORTHO05D006744 3.0e-70 269.6 347 48.7
CARHR047000 Cardamine hirsuta HOM05D005438 ORTHO05D006744 1.3e-68 264.2 336 46.7
Zm00001eb001860 Zea mays HOM05D005438 ORTHO05D006744 2.8e-68 263.1 344 47.4
Os03g0125300 Oryza sativa ssp. japonica HOM05D005438 ORTHO05D006744 1.6e-66 257.3 355 45.1
ATR0661G541 Amborella trichopoda HOM05D005438 ORTHO05D006744 3.5e-66 256.1 327 48.9
HPP92_021018 Vanilla planifolia HOM05D005438 ORTHO05D006744 1.8e-62 243.8 334 47.3
CDE04G0809 Ceratophyllum demersum HOM05D005438 ORTHO05D006744 2.3e-62 243.4 320 47.2
SEGI_20773 Sequoiadendron giganteum HOM05D005438 ORTHO05D006744 5.4e-59 232.3 381 40.7
CSS0015982 Camellia sinensis var. sinensis HOM05D005438 ORTHO05D006744 8.6e-57 224.9 327 46.8
Haze_08758 Corylus avellana HOM05D005438 ORTHO05D006744 4.0e-54 216.1 298 46.0
SMO134G0098 Selaginella moellendorffii HOM05D005438 ORTHO05D006744 3.0e-46 189.9 321 38.3
Pp3c2_28530 Physcomitrium patens HOM05D005438 ORTHO05D006744 6.8e-46 188.7 346 36.7
Mapoly0090s0083 Marchantia polymorpha HOM05D005438 ORTHO05D006744 1.0e-41 174.9 328 37.5
SHI31900 Sapria himalayana HOM05D005438 ORTHO05D006744 1.1e-38 164.9 299 39.8
Cpa.g.sc631.4 Carica papaya HOM05D005438 ORTHO05D006744 2.4e-35 153.7 143 55.9
Lsat_1_v5_gn_1_49360 Lactuca sativa HOM05D005438 ORTHO05D006744 2.4e-35 153.7 185 48.1
Lsat_1_v5_gn_5_103140 Lactuca sativa HOM05D005438 ORTHO05D006744 2.4e-35 153.7 185 48.1
Lsat_1_v5_gn_9_38321 Lactuca sativa HOM05D005438 ORTHO05D006744 2.4e-35 153.7 185 48.1
AagrBONN_evm.TU.Sc2ySwM_344.4712 Anthoceros agrestis HOM05D005438 ORTHO05D006744 7.0e-35 152.1 488 29.5
BcaC04g22519 Brassica carinata HOM05D005438 ORTHO05D006744 1.3e-33 147.9 155 52.3
CSS0040427 Camellia sinensis var. sinensis HOM05D005438 ORTHO05D006744 3.9e-33 146.4 141 58.9
Pp3c7_27020 Physcomitrium patens HOM05D005438 ORTHO05D006744 1.1e-30 138.3 340 33.5
CBR_g35011 Chara braunii HOM05D005438 ORTHO05D006744 3.4e-29 133.3 326 32.2
Cpa.g.c39085 Carica papaya HOM05D005438 ORTHO05D006744 5.8e-29 132.5 173 45.1
CDE12G0222 Ceratophyllum demersum HOM05D005438 ORTHO05D006744 2.1e-26 124.0 141 52.5
Actinidia28345 Actinidia chinensis HOM05D005438 ORTHO05D006744 3.1e-22 110.2 83 68.7
ECA246G3112 Erigeron canadensis HOM05D005438 ORTHO05D006744 7.8e-18 95.5 101 49.5
ATR0661G444 Amborella trichopoda HOM05D005438 ORTHO05D006744 9.6e-16 88.6 135 40.0
Cre07.g347300 Chlamydomonas reinhardtii HOM05D005438 ORTHO05D021338 2.4e-14 84.0 379 25.6
Cre07.g347400 Chlamydomonas reinhardtii HOM05D005438 ORTHO05D006744 2.4e-14 84.0 379 25.6
BcaNung05361 Brassica carinata HOM05D005438 ORTHO05D006744 9.0e-14 82.0 144 43.1
HanXRQChr16g0521071 Helianthus annuus HOM05D005438 ORTHO05D006744 5.4e-11 72.8 38 89.5
MCO11G547 Micromonas commoda HOM05D005438 ORTHO05D006744 1.1e-08 65.1 321 24.6
Cre01.g054000 Chlamydomonas reinhardtii HOM05D005438 ORTHO05D006744 2.1e-07 60.8 93 36.6


User provided reference genes

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