Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_26.g9948 Utricularia gibba HOM05D004790 ORTHO05D005678 3.5e-310 1067.4 522 100.0
MSTRG.12822 Avicennia marina HOM05D004790 ORTHO05D005678 5.0e-171 605.1 529 59.4
Migut.H01089 Erythranthe guttata HOM05D004790 ORTHO05D005678 7.2e-170 601.3 534 59.0
Oeu045846.1 Olea europaea HOM05D004790 ORTHO05D005678 7.2e-170 601.3 532 57.9
SGA_v2.0_scaffold109G31134 Striga asiatica HOM05D004790 ORTHO05D005678 9.4e-170 600.9 527 57.5
Oeu029923.1 Olea europaea HOM05D004790 ORTHO05D005678 2.2e-163 579.7 529 57.1
SalBow7G3762 Salvia bowleyana HOM05D004790 ORTHO05D005678 2.2e-158 563.1 555 54.2
Cc05_g07060 Coffea canephora HOM05D004790 ORTHO05D005678 3.1e-157 559.3 529 54.3
Dinv23649 Davidia involucrata HOM05D004790 ORTHO05D005678 7.4e-151 538.1 540 52.0
CSS0024255 Camellia sinensis var. sinensis HOM05D004790 ORTHO05D005678 2.2e-147 526.6 551 51.0
CSS0033247 Camellia sinensis var. sinensis HOM05D004790 ORTHO05D005678 2.2e-147 526.6 551 51.0
MD17G1241500 Malus domestica HOM05D004790 ORTHO05D005678 4.2e-146 522.3 529 51.4
vmacro12295 Vaccinium macrocarpon HOM05D004790 ORTHO05D005678 9.4e-146 521.2 555 50.6
Atru.chr6.3004 Acer truncatum HOM05D004790 ORTHO05D005678 2.1e-145 520.0 529 50.9
Peaxi162Scf00206g00710 Petunia axillaris HOM05D004790 ORTHO05D005678 2.7e-145 519.6 531 51.2
Prupe.3G136400 Prunus persica HOM05D004790 ORTHO05D005678 4.7e-145 518.8 540 50.4
Ciclev10014904m.g Citrus clementina HOM05D004790 ORTHO05D005678 8.0e-145 518.1 528 51.7
Nitab4.5_0000585g0100 Nicotiana tabacum HOM05D004790 ORTHO05D005678 1.4e-144 517.3 535 52.7
Actinidia09859 Actinidia chinensis HOM05D004790 ORTHO05D005678 2.3e-144 516.5 560 49.5
Lj1A724T21 Lonicera japonica HOM05D004790 ORTHO05D005678 8.8e-144 514.6 515 51.3
Actinidia11039 Actinidia chinensis HOM05D004790 ORTHO05D005678 1.5e-143 513.8 531 49.7
MD09G1249000 Malus domestica HOM05D004790 ORTHO05D005678 2.6e-143 513.1 526 49.4
PGSC0003DMG400021668 Solanum tuberosum HOM05D004790 ORTHO05D005678 3.3e-143 512.7 534 52.4
Manes.13G147300 Manihot esculenta HOM05D004790 ORTHO05D005678 6.3e-142 508.4 528 51.3
ClCG02G017590 Citrullus lanatus HOM05D004790 ORTHO05D005678 1.4e-141 507.3 528 51.7
CAN.G1655.2 Capsicum annuum HOM05D004790 ORTHO05D005678 3.1e-141 506.1 533 51.6
SalBow7G1856 Salvia bowleyana HOM05D004790 ORTHO05D005678 9.1e-141 504.6 473 57.3
Nitab4.5_0007168g0010 Nicotiana tabacum HOM05D004790 ORTHO05D005678 2.0e-140 503.4 537 52.1
CsaV3_6G012960 Cucumis sativus L. HOM05D004790 ORTHO05D005678 2.2e-139 500.0 531 50.3
Hma1.2p1_0213F.1_g090370 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 6.5e-139 498.4 554 48.7
RcHm_v2.0_Chr2g0126141 Rosa chinensis HOM05D004790 ORTHO05D005678 8.5e-139 498.0 541 49.7
TAR627G0452 Trochodendron aralioides HOM05D004790 ORTHO05D005678 8.5e-139 498.0 534 50.0
Sopen10g004250 Solanum pennellii HOM05D004790 ORTHO05D005678 1.5e-138 497.3 539 51.0
Solyc10g008420.3 Solanum lycopersicum HOM05D004790 ORTHO05D005678 4.2e-138 495.7 539 51.0
Duzib248G1314 Durio zibethinus HOM05D004790 ORTHO05D005678 2.7e-137 493.0 524 48.5
MELO3C013614.2 Cucumis melo HOM05D004790 ORTHO05D005678 3.6e-137 492.7 531 49.7
FvH4_6g26160 Fragaria vesca HOM05D004790 ORTHO05D005678 3.6e-137 492.7 531 50.3
Sed0002654 Sechium edule HOM05D004790 ORTHO05D005678 1.0e-136 491.1 536 50.2
Thecc.02G178300 Theobroma cacao HOM05D004790 ORTHO05D005678 1.0e-136 491.1 528 49.1
Cpa.g.sc34.151 Carica papaya HOM05D004790 ORTHO05D005678 1.4e-136 490.7 522 48.1
Gohir.D04G143900 Gossypium hirsutum HOM05D004790 ORTHO05D005678 6.8e-136 488.4 528 48.5
Gorai.012G129400 Gossypium raimondii HOM05D004790 ORTHO05D005678 6.8e-136 488.4 528 48.5
COL.COLO4_30176 Corchorus olitorius HOM05D004790 ORTHO05D005678 8.8e-136 488.0 523 49.9
FAN02G0059 Fragaria x ananassa HOM05D004790 ORTHO05D005678 3.4e-135 486.1 533 49.7
Gohir.A04G104200 Gossypium hirsutum HOM05D004790 ORTHO05D005678 1.3e-134 484.2 528 48.5
TWI36G0090 Tripterygium wilfordii HOM05D004790 ORTHO05D005678 1.3e-134 484.2 538 48.3
Potri.013G133200 Populus trichocarpa HOM05D004790 ORTHO05D005678 4.8e-134 482.3 528 47.5
Rhsim06G0143900 Rhododendron simsii HOM05D004790 ORTHO05D005678 6.3e-134 481.9 552 48.4
PGR042G3525 Punica granatum HOM05D004790 ORTHO05D005678 2.4e-133 479.9 528 47.7
Eucgr.A01811 Eucalyptus grandis HOM05D004790 ORTHO05D005678 7.0e-133 478.4 536 48.5
Manes.12G090600 Manihot esculenta HOM05D004790 ORTHO05D005678 2.7e-132 476.5 529 48.0
DCAR_013003 Daucus carota HOM05D004790 ORTHO05D005678 2.9e-131 473.0 536 47.4
Ah.01g015210 Amaranthus hybridus HOM05D004790 ORTHO05D005678 3.8e-131 472.6 546 47.1
CANSAT11G0193 Cannabis sativa HOM05D004790 ORTHO05D005678 2.5e-130 469.9 544 48.3
Sabra13G0113200 Salix brachista HOM05D004790 ORTHO05D005678 5.5e-130 468.8 528 46.4
Cfa014604 Carpinus fangiana HOM05D004790 ORTHO05D005678 5.2e-128 462.2 528 47.3
Lsat_1_v5_gn_4_65660 Lactuca sativa HOM05D004790 ORTHO05D005678 5.2e-128 462.2 525 48.2
QL08p038483 Quercus lobata HOM05D004790 ORTHO05D005678 5.2e-128 462.2 525 47.4
CiPaw.03G175600 Carya illinoinensis HOM05D004790 ORTHO05D005678 5.7e-127 458.8 529 46.3
Sabra19G0111100 Salix brachista HOM05D004790 ORTHO05D005678 6.3e-126 455.3 529 46.1
Lsat_1_v5_gn_8_133340 Lactuca sativa HOM05D004790 ORTHO05D005678 5.4e-125 452.2 516 48.6
Sabra19G0112400 Salix brachista HOM05D004790 ORTHO05D005678 1.6e-124 450.7 530 47.0
Sc12g0003010 Simmondsia chinensis HOM05D004790 ORTHO05D005678 1.6e-124 450.7 563 43.9
Nn1g04055 Nelumbo nucifera HOM05D004790 ORTHO05D005678 2.0e-124 450.3 549 45.0
Haze_13149 Corylus avellana HOM05D004790 ORTHO05D005678 4.5e-124 449.1 519 45.9
THA.LOC104804061 Tarenaya hassleriana HOM05D004790 ORTHO05D005678 4.5e-124 449.1 528 45.5
HanXRQChr17g0553511 Helianthus annuus HOM05D004790 ORTHO05D005678 5.9e-124 448.7 511 49.1
EL10Ac9g20754 Beta vulgaris HOM05D004790 ORTHO05D005678 1.3e-123 447.6 556 44.8
Thhalv10024944m.g Eutrema salsugineum HOM05D004790 ORTHO05D005678 1.7e-123 447.2 531 45.4
Phvul.005G104500 Phaseolus vulgaris HOM05D004790 ORTHO05D005678 2.9e-123 446.4 527 45.9
VMungo1080G1693 Vigna mungo HOM05D004790 ORTHO05D005678 1.5e-122 444.1 526 45.4
CARHR235970 Cardamine hirsuta HOM05D004790 ORTHO05D005678 2.5e-122 443.4 529 45.2
Hund01104 Selenicereus undatus HOM05D004790 ORTHO05D005678 3.3e-122 443.0 552 45.5
Glyma.12G203700 Glycine max HOM05D004790 ORTHO05D005678 4.3e-122 442.6 523 46.1
Glyma.13G298000 Glycine max HOM05D004790 ORTHO05D005678 7.3e-122 441.8 527 45.9
Gorai.013G075500 Gossypium raimondii HOM05D004790 ORTHO05D005678 1.2e-121 441.0 522 47.5
AT4G28260 Arabidopsis thaliana HOM05D004790 ORTHO05D005678 2.8e-121 439.9 540 44.4
AL7G24340 Arabidopsis lyrata HOM05D004790 ORTHO05D005678 1.4e-120 437.6 537 44.7
Carub.0007s1250 Capsella rubella HOM05D004790 ORTHO05D005678 2.3e-120 436.8 537 44.1
Sp7g26220 Schrenkiella parvula HOM05D004790 ORTHO05D005678 2.0e-119 433.7 530 44.3
FAN05G3153 Fragaria x ananassa HOM05D004790 ORTHO05D005678 3.4e-119 433.0 476 49.4
BcaB03g12561 Brassica carinata HOM05D004790 ORTHO05D005678 2.0e-116 423.7 533 43.3
MBI19_g19847_MAGBIO Magnolia biondii HOM05D004790 ORTHO05D005678 4.6e-116 422.5 558 42.7
BcaC06g32632 Brassica carinata HOM05D004790 ORTHO05D005678 6.0e-116 422.2 515 45.2
A03p57970 Brassica napus HOM05D004790 ORTHO05D005678 1.0e-115 421.4 527 43.8
C08p10710 Brassica napus HOM05D004790 ORTHO05D005678 1.3e-115 421.0 529 43.1
BraA03t14860Z Brassica rapa HOM05D004790 ORTHO05D005678 1.7e-115 420.6 527 43.8
A08p20170 Brassica napus HOM05D004790 ORTHO05D005678 3.9e-115 419.5 530 43.4
BolC7t46084H Brassica oleracea HOM05D004790 ORTHO05D005678 5.0e-115 419.1 513 45.0
Aa31LG11G10330 Aethionema arabicum HOM05D004790 ORTHO05D005678 8.6e-115 418.3 520 44.4
BraA08t33977Z Brassica rapa HOM05D004790 ORTHO05D005678 8.6e-115 418.3 533 43.3
BolC8t48743H Brassica oleracea HOM05D004790 ORTHO05D005678 1.1e-114 417.9 529 42.9
Lalb_Chr14g0366851 Lupinus albus HOM05D004790 ORTHO05D005678 9.5e-114 414.8 517 44.9
AUR62037353 Chenopodium quinoa HOM05D004790 ORTHO05D005678 2.8e-113 413.3 539 43.0
C07p56090 Brassica napus HOM05D004790 ORTHO05D005678 6.2e-113 412.1 518 44.0
Lalb_Chr22g0356521 Lupinus albus HOM05D004790 ORTHO05D005678 1.1e-112 411.4 508 43.9
Lj3g0014290 Lotus japonicus HOM05D004790 ORTHO05D005678 4.9e-110 402.5 527 43.5
Gohir.D13G066200 Gossypium hirsutum HOM05D004790 ORTHO05D005678 6.0e-108 395.6 522 44.6
Ca_01506_v3 Cicer arietinum L. HOM05D004790 ORTHO05D005678 7.8e-108 395.2 531 42.4
SHI10412 Sapria himalayana HOM05D004790 ORTHO05D005678 1.1e-106 391.3 566 40.1
ECA234G1653 Erigeron canadensis HOM05D004790 ORTHO05D005678 8.1e-105 385.2 486 45.5
Medtr2g090285 Medicago truncatula HOM05D004790 ORTHO05D005678 1.1e-104 384.8 527 42.1
Aqoxy1G02499 Aquilegia oxysepala HOM05D004790 ORTHO05D005678 5.2e-104 382.5 524 42.2
arahy.Tifrunner.gnm1.ann1.1EW4X0 Arachis hypogaea HOM05D004790 ORTHO05D005678 5.4e-101 372.5 542 41.3
arahy.Tifrunner.gnm1.ann1.DEE7JK Arachis hypogaea HOM05D004790 ORTHO05D005678 7.1e-101 372.1 533 41.7
Hma1.2p1_3039F.1_g331970 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 9.2e-101 371.7 510 39.4
PSO675G6339 Papaver somniferum HOM05D004790 ORTHO05D005678 4.7e-97 359.4 540 40.7
Gohir.A13G055800 Gossypium hirsutum HOM05D004790 ORTHO05D005678 8.1e-97 358.6 518 41.7
Duzib052G0346 Durio zibethinus HOM05D004790 ORTHO05D005678 4.0e-96 356.3 526 40.1
TPR.G6443 Trifolium pratense HOM05D004790 ORTHO05D005678 4.0e-96 356.3 534 39.9
PSO541G2110 Papaver somniferum HOM05D004790 ORTHO05D005678 5.2e-96 355.9 530 41.3
Zm00001eb044390 Zea mays HOM05D004790 ORTHO05D005678 1.9e-93 347.4 534 38.8
Zm00001eb044450 Zea mays HOM05D004790 ORTHO05D005678 1.0e-91 341.7 520 38.3
Hma1.2p1_1201F.1_g266610 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 1.8e-88 330.9 510 37.3
BcaC06g32633 Brassica carinata HOM05D004790 ORTHO05D005678 6.9e-88 328.9 387 46.3
ATR0680G165 Amborella trichopoda HOM05D004790 ORTHO05D005678 2.6e-87 327.0 533 37.7
CDE02G0639 Ceratophyllum demersum HOM05D004790 ORTHO05D005678 2.4e-85 320.5 576 37.0
GSVIVG01020532001 Vitis vinifera HOM05D004790 ORTHO05D005678 2.5e-82 310.5 521 37.0
Os10g0500600 Oryza sativa ssp. japonica HOM05D004790 ORTHO05D005678 5.3e-80 302.8 476 38.9
Hma1.2p1_3039F.1_g331990 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 1.9e-77 294.3 518 34.9
Hma1.2p1_1201F.1_g266630 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 6.0e-76 289.3 518 35.1
Hma1.2p1_3039F.1_g332010 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 2.9e-70 270.4 472 36.2
Hma1.2p1_1201F.1_g266650 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 6.5e-70 269.2 472 35.8
Hma1.2p1_3039F.1_g331980 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 7.1e-69 265.8 521 33.0
Aa31LG11G14100 Aethionema arabicum HOM05D004790 ORTHO05D005678 2.5e-58 230.7 507 31.4
Psat5g271320 Pisum sativum HOM05D004790 ORTHO05D005678 6.9e-56 222.6 527 29.2
Hma1.2p1_1201F.1_g266640 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 6.5e-54 216.1 466 33.0
Hma1.2p1_3039F.1_g332000 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 6.5e-54 216.1 466 33.0
Hma1.2p1_1201F.1_g266660 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 4.5e-47 193.4 398 31.7
HPP92_027303 Vanilla planifolia HOM05D004790 ORTHO05D005678 7.2e-45 186.0 273 41.8
Mapoly0001s0243 Marchantia polymorpha HOM05D004790 ORTHO05D005678 3.3e-42 177.2 519 29.5
Pp3c8_24840 Physcomitrium patens HOM05D004790 ORTHO05D005678 2.8e-41 174.1 543 26.9
SEGI_40185 Sequoiadendron giganteum HOM05D004790 ORTHO05D005678 1.3e-38 165.2 484 28.3
FAN05G5699 Fragaria x ananassa HOM05D004790 ORTHO05D005678 2.2e-38 164.5 165 50.9
Pp3c23_21860 Physcomitrium patens HOM05D004790 ORTHO05D005678 8.5e-38 162.5 541 25.1
Prupe.3G136600 Prunus persica HOM05D004790 ORTHO05D005678 1.1e-37 162.2 142 55.6
Dinv26430 Davidia involucrata HOM05D004790 ORTHO05D005678 1.5e-37 161.8 309 36.6
AUR62042487 Chenopodium quinoa HOM05D004790 ORTHO05D005678 5.2e-35 153.3 172 47.1
SEGI_15900 Sequoiadendron giganteum HOM05D004790 ORTHO05D005678 2.8e-33 147.5 433 27.9
SMO111G0050 Selaginella moellendorffii HOM05D004790 ORTHO05D005678 3.1e-32 144.1 458 27.5
Peaxi162Scf00132g00037 Petunia axillaris HOM05D004790 ORTHO05D005678 9.1e-24 115.9 447 23.7
Dinv07566 Davidia involucrata HOM05D004790 ORTHO05D005678 2.7e-20 104.4 510 22.0
Pp3c20_1230 Physcomitrium patens HOM05D004790 ORTHO05D005678 2.2e-17 94.7 391 23.5
Hma1.2p1_0002F.1_g002210 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 3.5e-15 87.4 290 27.6
TPR.G11082 Trifolium pratense HOM05D004790 ORTHO05D005678 4.5e-15 87.0 218 31.7
Sabra13G0109400 Salix brachista HOM05D004790 ORTHO05D005678 2.3e-14 84.7 73 57.5
GSVIVG01029526001 Vitis vinifera HOM05D004790 ORTHO05D005678 2.9e-14 84.3 68 57.4
AagrBONN_evm.TU.Sc2ySwM_228.2505 Anthoceros agrestis HOM05D004790 ORTHO05D005678 3.0e-11 74.3 106 33.0
Dinv17315 Davidia involucrata HOM05D004790 ORTHO05D005678 3.4e-10 70.9 85 38.8
Sabra13G0113000 Salix brachista HOM05D004790 ORTHO05D005678 9.8e-10 69.3 87 41.4
FAN05G5117 Fragaria x ananassa HOM05D000001 ORTHO05D000424 8.3e-09 66.2 57 56.1
Hma1.2p1_0002F.1_g002220 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 1.1e-08 65.9 56 51.8
AagrBONN_evm.TU.Sc2ySwM_228.2348 Anthoceros agrestis HOM05D004790 ORTHO05D007542 3.2e-08 64.3 61 42.6
Sabra13G0109000 Salix brachista HOM05D000001 ORTHO05D000424 3.2e-08 64.3 56 51.8
Psat2g052560 Pisum sativum HOM05D004790 ORTHO05D005678 5.0e-06 57.0 179 26.8


User provided reference genes

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