Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_26.g9483 Utricularia gibba HOM05D001999 ORTHO05D001994 1.5e-71 272.7 130 100.0
FAN09G2669 Fragaria x ananassa HOM05D001999 ORTHO05D001994 7.1e-10 67.8 55 58.2
Oeu043342.1 Olea europaea HOM05D001999 ORTHO05D001994 9.3e-10 67.4 51 60.8
FvH4_6g06620 Fragaria vesca HOM05D001999 ORTHO05D001994 1.2e-09 67.0 48 62.5
Prupe.6G320100 Prunus persica HOM05D001999 ORTHO05D001994 2.7e-09 65.9 43 67.4
Oeu010920.1 Olea europaea HOM05D001999 ORTHO05D001994 3.5e-09 65.5 45 73.3
PGSC0003DMG400024717 Solanum tuberosum HOM05D001999 ORTHO05D001994 3.5e-09 65.5 51 62.7
HanXRQChr11g0339901 Helianthus annuus HOM05D001999 ORTHO05D001994 7.8e-09 64.3 47 63.8
PGR083G1363 Punica granatum HOM05D001999 ORTHO05D001994 7.8e-09 64.3 53 64.2
ECA236G3557 Erigeron canadensis HOM05D001999 ORTHO05D001994 1.0e-08 63.9 52 57.7
VMungo0540G0393 Vigna mungo HOM05D001999 ORTHO05D001994 1.0e-08 63.9 55 56.4
TWI36G1062 Tripterygium wilfordii HOM05D001999 ORTHO05D001994 1.3e-08 63.5 52 55.8
GSVIVG01031134001 Vitis vinifera HOM05D001999 ORTHO05D001994 1.3e-08 63.5 46 65.2
Gorai.013G205600 Gossypium raimondii HOM05D001999 ORTHO05D001994 1.7e-08 63.2 46 60.9
THA.LOC104802795 Tarenaya hassleriana HOM05D001999 ORTHO05D001994 1.7e-08 63.2 52 53.8
Nitab4.5_0010216g0020 Nicotiana tabacum HOM05D001999 ORTHO05D001994 2.3e-08 62.8 46 58.7
Migut.N02088 Erythranthe guttata HOM05D001999 ORTHO05D001994 3.0e-08 62.4 52 57.7
Nn4g25807 Nelumbo nucifera HOM05D001999 ORTHO05D001994 3.0e-08 62.4 47 63.8
Sopen01g043310 Solanum pennellii HOM05D001999 ORTHO05D001994 3.0e-08 62.4 51 56.9
DCAR_003361 Daucus carota HOM05D001999 ORTHO05D001994 3.9e-08 62.0 51 54.9
Glyma.19G232800 Glycine max HOM05D001999 ORTHO05D001994 3.9e-08 62.0 49 61.2
Phvul.006G089200 Phaseolus vulgaris HOM05D001999 ORTHO05D001994 3.9e-08 62.0 49 61.2
Solyc01g099790.3 Solanum lycopersicum HOM05D001999 ORTHO05D001994 3.9e-08 62.0 45 64.4
Atru.chr2.75 Acer truncatum HOM05D001999 ORTHO05D001994 5.1e-08 61.6 42 64.3
Actinidia19777 Actinidia chinensis HOM05D001999 ORTHO05D001994 5.1e-08 61.6 47 59.6
Glyma.03G235100 Glycine max HOM05D001999 ORTHO05D001994 5.1e-08 61.6 49 61.2
Lsat_1_v5_gn_7_72040 Lactuca sativa HOM05D001999 ORTHO05D001994 5.1e-08 61.6 50 62.0
Oeu043739.1 Olea europaea HOM05D001999 ORTHO05D001994 5.1e-08 61.6 51 58.8
arahy.Tifrunner.gnm1.ann1.J3YIB3 Arachis hypogaea HOM05D001999 ORTHO05D001994 6.6e-08 61.2 49 55.1
MSTRG.27977 Avicennia marina HOM05D001999 ORTHO05D001994 6.6e-08 61.2 51 56.9
Nitab4.5_0003844g0010 Nicotiana tabacum HOM05D001999 ORTHO05D001994 6.6e-08 61.2 46 56.5
Sabra05G0030100 Salix brachista HOM05D001999 ORTHO05D001994 6.6e-08 61.2 51 56.9
Aa31LG5G15830 Aethionema arabicum HOM05D001999 ORTHO05D001994 8.7e-08 60.8 55 52.7
Lj5A391T59 Lonicera japonica HOM05D001999 ORTHO05D001994 8.7e-08 60.8 53 52.8
Lj5A396T57 Lonicera japonica HOM05D001999 ORTHO05D001994 8.7e-08 60.8 53 52.8
MD12G1212400 Malus domestica HOM05D001999 ORTHO05D001994 8.7e-08 60.8 53 56.6
Hund07102 Selenicereus undatus HOM05D001999 ORTHO05D001994 8.7e-08 60.8 47 57.4
SGA_v2.0_scaffold586G53057 Striga asiatica HOM05D001999 ORTHO05D001994 8.7e-08 60.8 51 54.9
arahy.Tifrunner.gnm1.ann1.AWF533 Arachis hypogaea HOM05D001999 ORTHO05D001994 1.1e-07 60.5 49 55.1
FAN14G1734 Fragaria x ananassa HOM05D001999 ORTHO05D001994 1.1e-07 60.5 45 62.2
Gohir.A13G174400 Gossypium hirsutum HOM05D001999 ORTHO05D001994 1.1e-07 60.5 46 63.0
Gohir.D13G180200 Gossypium hirsutum HOM05D001999 ORTHO05D001994 1.1e-07 60.5 46 63.0
Manes.09G170900 Manihot esculenta HOM05D001999 ORTHO05D001994 1.1e-07 60.5 54 53.7
Oeu045900.1 Olea europaea HOM05D001999 ORTHO05D001994 1.1e-07 60.5 71 46.5
unitig_0.g2317 Utricularia gibba HOM05D001999 ORTHO05D001994 1.1e-07 60.5 51 56.9
Ciclev10001227m.g Citrus clementina HOM05D001999 ORTHO05D001994 1.5e-07 60.1 45 60.0
Gohir.A13G109800 Gossypium hirsutum HOM05D001999 ORTHO05D001994 1.5e-07 60.1 54 53.7
Gohir.D13G112400 Gossypium hirsutum HOM05D001999 ORTHO05D001994 1.5e-07 60.1 54 53.7
Gorai.013G126200 Gossypium raimondii HOM05D001999 ORTHO05D001994 1.5e-07 60.1 54 53.7
Haze_04134 Corylus avellana HOM05D001999 ORTHO05D001994 1.9e-07 59.7 47 59.6
Lj5g0002371 Lotus japonicus HOM05D001999 ORTHO05D001994 1.9e-07 59.7 44 63.6
Lalb_Chr18g0045791 Lupinus albus HOM05D001999 ORTHO05D001994 1.9e-07 59.7 49 57.1
FAN05G1277 Fragaria x ananassa HOM05D001999 ORTHO05D001994 2.5e-07 59.3 44 59.1
Peaxi162Scf00037g01221 Petunia axillaris HOM05D001999 ORTHO05D001994 2.5e-07 59.3 50 52.0
Thecc.05G313600 Theobroma cacao HOM05D001999 ORTHO05D001994 2.5e-07 59.3 44 61.4
EL10Ac4g09908 Beta vulgaris HOM05D001999 ORTHO05D001994 3.3e-07 58.9 53 58.5
CSS0046081 Camellia sinensis var. sinensis HOM05D001999 ORTHO05D001994 3.3e-07 58.9 49 59.2
AUR62000756 Chenopodium quinoa HOM05D001999 ORTHO05D001994 3.3e-07 58.9 44 63.6
AUR62005212 Chenopodium quinoa HOM05D001999 ORTHO05D001994 3.3e-07 58.9 44 63.6
Hund21714 Selenicereus undatus HOM05D001999 ORTHO05D001994 3.3e-07 58.9 50 56.0
Cpa.g.sc327.4 Carica papaya HOM05D001999 ORTHO05D001994 4.3e-07 58.5 30 80.0
Gohir.A11G268300 Gossypium hirsutum HOM05D001999 ORTHO05D001994 4.3e-07 58.5 30 80.0
Gohir.D11G278200 Gossypium hirsutum HOM05D001999 ORTHO05D001994 4.3e-07 58.5 30 80.0
Lalb_Chr06g0167721 Lupinus albus HOM05D001999 ORTHO05D001994 4.3e-07 58.5 47 59.6
Potri.005G024700 Populus trichocarpa HOM05D001999 ORTHO05D001994 4.3e-07 58.5 30 80.0
arahy.Tifrunner.gnm1.ann1.5G7CV2 Arachis hypogaea HOM05D001999 ORTHO05D001994 5.6e-07 58.2 50 52.0
arahy.Tifrunner.gnm1.ann1.XS7LB4 Arachis hypogaea HOM05D001999 ORTHO05D001994 5.6e-07 58.2 50 52.0
CSS0018606 Camellia sinensis var. sinensis HOM05D001999 ORTHO05D001994 5.6e-07 58.2 49 55.1
CSS0039587 Camellia sinensis var. sinensis HOM05D001999 ORTHO05D001994 5.6e-07 58.2 49 55.1
Duzib177G1061 Durio zibethinus HOM05D001999 ORTHO05D001994 5.6e-07 58.2 44 61.4
Gorai.007G300400 Gossypium raimondii HOM05D001999 ORTHO05D001994 5.6e-07 58.2 30 80.0
MD04G1199600 Malus domestica HOM05D001999 ORTHO05D001994 5.6e-07 58.2 46 60.9
Medtr7g112740 Medicago truncatula HOM05D001999 ORTHO05D001994 5.6e-07 58.2 49 53.1
Sabra13G0013900 Salix brachista HOM05D000092 ORTHO05D000042 5.6e-07 58.2 31 77.4
Sabra13G0017800 Salix brachista HOM05D001999 ORTHO05D001994 5.6e-07 58.2 30 80.0
Sabra13G0019100 Salix brachista HOM05D001999 ORTHO05D001994 5.6e-07 58.2 31 77.4
Sc16g0008800 Simmondsia chinensis HOM05D001999 ORTHO05D001994 7.3e-07 57.8 28 82.1
CiPaw.07G022200 Carya illinoinensis HOM05D001999 ORTHO05D001994 9.6e-07 57.4 44 61.4
Duzib128G0926 Durio zibethinus HOM05D001999 ORTHO05D001994 9.6e-07 57.4 47 59.6
MD10G1168300 Malus domestica HOM05D001999 ORTHO05D001994 9.6e-07 57.4 43 60.5
Dinv40334 Davidia involucrata HOM05D001999 ORTHO05D001994 1.3e-06 57.0 50 52.0
Eucgr.B01912 Eucalyptus grandis HOM05D001999 ORTHO05D001994 1.3e-06 57.0 46 56.5
FAN02G3011 Fragaria x ananassa HOM05D001999 ORTHO05D001994 1.3e-06 57.0 48 54.2
Glyma.20G236700 Glycine max HOM05D001999 ORTHO05D001994 1.3e-06 57.0 44 59.1
Sed0027191 Sechium edule HOM05D001999 ORTHO05D001994 1.3e-06 57.0 50 58.0
Cfa006634 Carpinus fangiana HOM05D001999 ORTHO05D001994 1.6e-06 56.6 30 76.7
Potri.013G015600 Populus trichocarpa HOM05D001999 ORTHO05D001994 1.6e-06 56.6 30 76.7
Rhsim05G0138600 Rhododendron simsii HOM05D001999 ORTHO05D001994 1.6e-06 56.6 47 55.3
Sabra13G0013700 Salix brachista HOM05D001999 ORTHO05D001994 1.6e-06 56.6 30 76.7
Sabra13G0015200 Salix brachista HOM05D000070 ORTHO05D001994 1.6e-06 56.6 30 76.7
Lj9C146G5 Lonicera japonica HOM05D001999 ORTHO05D001994 2.1e-06 56.2 51 52.9
Manes.08G117000 Manihot esculenta HOM05D001999 ORTHO05D001994 2.1e-06 56.2 30 76.7
Phvul.007G197300 Phaseolus vulgaris HOM05D001999 ORTHO05D001994 2.1e-06 56.2 43 60.5
PGR031G0021 Punica granatum HOM05D001999 ORTHO05D001994 2.1e-06 56.2 49 55.1
RcHm_v2.0_Chr3g0455821 Rosa chinensis HOM05D001999 ORTHO05D001994 2.1e-06 56.2 48 56.2
TWI56G0125 Tripterygium wilfordii HOM05D001999 ORTHO05D001994 2.1e-06 56.2 30 76.7
Actinidia21498 Actinidia chinensis HOM05D001999 ORTHO05D001994 2.8e-06 55.8 47 55.3
Cc02_g34200 Coffea canephora HOM05D001999 ORTHO05D001994 2.8e-06 55.8 33 69.7
Dinv30819 Davidia involucrata HOM05D001999 ORTHO05D001994 2.8e-06 55.8 51 51.0
Glyma.10G151500 Glycine max HOM05D001999 ORTHO05D001994 2.8e-06 55.8 44 59.1
Rhsim13G0010900 Rhododendron simsii HOM05D001999 ORTHO05D001994 2.8e-06 55.8 46 56.5
Actinidia35557 Actinidia chinensis HOM05D001999 ORTHO05D001994 3.6e-06 55.5 47 57.4
Lalb_Chr02g0148101 Lupinus albus HOM05D001999 ORTHO05D001994 3.6e-06 55.5 56 41.1
THA.LOC104818723 Tarenaya hassleriana HOM05D001999 ORTHO05D001994 3.6e-06 55.5 55 47.3
QL03p020135 Quercus lobata HOM05D001999 ORTHO05D001994 4.8e-06 55.1 41 58.5
SGA_v2.0_scaffold80G25894 Striga asiatica HOM05D001999 ORTHO05D001994 4.8e-06 55.1 47 57.4
TAR362G0062 Trochodendron aralioides HOM05D001999 ORTHO05D001994 4.8e-06 55.1 44 56.8
unitig_52.g17384 Utricularia gibba HOM05D001999 ORTHO05D001994 4.8e-06 55.1 51 51.0
ClCG03G017310 Citrullus lanatus HOM05D001999 ORTHO05D001994 6.2e-06 54.7 50 56.0
MELO3C015298.2 Cucumis melo HOM05D001999 ORTHO05D001994 6.2e-06 54.7 50 56.0
ATR0796G022 Amborella trichopoda HOM05D001999 ORTHO05D001994 8.1e-06 54.3 49 57.1
Aqoxy5G00748 Aquilegia oxysepala HOM05D001999 ORTHO05D001994 8.1e-06 54.3 51 51.0
Psat0s1500g0040 Pisum sativum HOM05D001999 ORTHO05D001994 8.1e-06 54.3 40 62.5
Sc06g0004090 Simmondsia chinensis HOM05D001999 ORTHO05D001994 8.1e-06 54.3 51 49.0
THA.LOC104821725 Tarenaya hassleriana HOM05D001999 ORTHO05D001994 8.1e-06 54.3 55 47.3


User provided reference genes

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