Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_26.g9473 Utricularia gibba HOM05D005552 ORTHO05D006743 8.6e-134 480.3 245 100.0
Oeu020899.1 Olea europaea HOM05D005552 ORTHO05D006743 2.5e-80 302.8 245 62.0
Oeu035482.1 Olea europaea HOM05D005552 ORTHO05D006743 5.5e-80 301.6 245 60.8
COL.COLO4_11363 Corchorus olitorius HOM05D005552 ORTHO05D006743 3.1e-75 285.8 244 58.6
Prupe.7G138000 Prunus persica HOM05D005552 ORTHO05D006743 5.3e-75 285.0 246 58.9
Dinv39890 Davidia involucrata HOM05D005552 ORTHO05D006743 7.0e-75 284.6 245 58.8
Gohir.D11G196500 Gossypium hirsutum HOM05D005552 ORTHO05D006743 1.6e-74 283.5 244 57.4
Thecc.01G050800 Theobroma cacao HOM05D005552 ORTHO05D006743 2.6e-74 282.7 244 57.4
MD15G1279300 Malus domestica HOM05D005552 ORTHO05D006743 4.5e-74 282.0 245 58.8
Cc02_g34610 Coffea canephora HOM05D005552 ORTHO05D006743 5.9e-74 281.6 244 57.0
FAN26G2590 Fragaria x ananassa HOM05D005552 ORTHO05D006743 5.9e-74 281.6 245 57.6
MSTRG.5133 Avicennia marina HOM05D005552 ORTHO05D006743 7.7e-74 281.2 245 60.8
Gorai.007G210400 Gossypium raimondii HOM05D005552 ORTHO05D006743 7.7e-74 281.2 244 56.6
FAN28G0665 Fragaria x ananassa HOM05D005552 ORTHO05D006743 2.9e-73 279.3 245 56.7
FvH4_1g15480 Fragaria vesca HOM05D005552 ORTHO05D006743 1.1e-72 277.3 245 56.3
CANSAT64G0631 Cannabis sativa HOM05D005552 ORTHO05D006743 1.5e-72 276.9 245 56.7
RcHm_v2.0_Chr2g0104711 Rosa chinensis HOM05D005552 ORTHO05D006743 7.2e-72 274.6 245 57.1
CiPaw.01G023200 Carya illinoinensis HOM05D005552 ORTHO05D006743 9.4e-72 274.2 245 57.1
SGA_v2.0_scaffold36G14364 Striga asiatica HOM05D005552 ORTHO05D006743 9.4e-72 274.2 250 61.2
FAN19G0212 Fragaria x ananassa HOM05D005552 ORTHO05D006743 2.1e-71 273.1 245 55.1
Cfa003976 Carpinus fangiana HOM05D005552 ORTHO05D006743 3.6e-71 272.3 245 56.3
Duzib264G1173 Durio zibethinus HOM05D005552 ORTHO05D006743 6.1e-71 271.6 244 57.0
vmacro21371 Vaccinium macrocarpon HOM05D005552 ORTHO05D006743 6.1e-71 271.6 245 55.9
Ciclev10025258m.g Citrus clementina HOM05D005552 ORTHO05D006743 8.0e-71 271.2 244 55.7
Potri.001G361900 Populus trichocarpa HOM05D005552 ORTHO05D006743 1.8e-70 270.0 245 57.1
Hma1.2p1_0873F.1_g231280 Hydrangea macrophylla HOM05D005552 ORTHO05D006743 6.7e-70 268.1 244 55.7
Hma1.2p1_0873F.1_g231290 Hydrangea macrophylla HOM05D005552 ORTHO05D006743 6.7e-70 268.1 244 55.7
GSVIVG01003549001 Vitis vinifera HOM05D005552 ORTHO05D006743 1.5e-69 266.9 246 56.1
arahy.Tifrunner.gnm1.ann1.A2BBUY Arachis hypogaea HOM05D005552 ORTHO05D006743 2.6e-69 266.2 245 56.7
Haze_15444 Corylus avellana HOM05D005552 ORTHO05D006743 2.6e-69 266.2 256 54.3
arahy.Tifrunner.gnm1.ann1.21BGDZ Arachis hypogaea HOM05D005552 ORTHO05D006743 3.3e-69 265.8 245 56.7
Nitab4.5_0002715g0120 Nicotiana tabacum HOM05D005552 ORTHO05D006743 7.5e-69 264.6 273 53.1
Actinidia12065 Actinidia chinensis HOM05D005552 ORTHO05D006743 9.7e-69 264.2 245 55.9
PSO541G0461 Papaver somniferum HOM05D005552 ORTHO05D006743 1.3e-68 263.8 247 55.5
Solyc01g100190.4 Solanum lycopersicum HOM05D005552 ORTHO05D006743 6.3e-68 261.5 244 56.1
Manes.16G089500 Manihot esculenta HOM05D005552 ORTHO05D006743 8.2e-68 261.2 245 55.5
Peaxi162Scf00073g00015 Petunia axillaris HOM05D005552 ORTHO05D006743 8.2e-68 261.2 244 55.3
Nitab4.5_0000368g0430 Nicotiana tabacum HOM05D005552 ORTHO05D006743 1.4e-67 260.4 273 52.0
PSO675G7200 Papaver somniferum HOM05D005552 ORTHO05D006743 1.8e-67 260.0 246 54.9
QL06p042750 Quercus lobata HOM05D005552 ORTHO05D006743 1.8e-67 260.0 244 53.7
Sopen01g043680 Solanum pennellii HOM05D005552 ORTHO05D006743 2.4e-67 259.6 244 56.6
Sopen01g043710 Solanum pennellii HOM05D005552 ORTHO05D006743 2.4e-67 259.6 244 56.6
CAN.G1273.15 Capsicum annuum HOM05D005552 ORTHO05D006743 4.1e-67 258.8 245 56.3
MELO3C007542.2 Cucumis melo HOM05D005552 ORTHO05D006743 4.1e-67 258.8 245 53.9
CsaV3_6G043060 Cucumis sativus L. HOM05D005552 ORTHO05D006743 4.1e-67 258.8 248 54.0
Cpa.g.sc6.396 Carica papaya HOM05D005552 ORTHO05D006743 5.3e-67 258.5 244 53.3
PGSC0003DMG400024733 Solanum tuberosum HOM05D005552 ORTHO05D006743 7.0e-67 258.1 244 54.9
TPR.G11337 Trifolium pratense HOM05D005552 ORTHO05D006743 9.1e-67 257.7 245 54.7
TWI09G0520 Tripterygium wilfordii HOM05D005552 ORTHO05D006743 1.2e-66 257.3 245 54.7
Ca_24792_v3 Cicer arietinum L. HOM05D005552 ORTHO05D006743 2.0e-66 256.5 245 54.3
Glyma.01G183800 Glycine max HOM05D005552 ORTHO05D006743 2.0e-66 256.5 245 54.7
CDE04G2042 Ceratophyllum demersum HOM05D005552 ORTHO05D006743 2.7e-66 256.1 244 54.5
ClCG01G016650 Citrullus lanatus HOM05D005552 ORTHO05D006743 1.3e-65 253.8 248 54.0
Sed0018600 Sechium edule HOM05D005552 ORTHO05D006743 1.3e-65 253.8 245 54.7
ECA232G0422 Erigeron canadensis HOM05D005552 ORTHO05D006743 1.7e-65 253.4 246 52.8
MD02G1166800 Malus domestica HOM05D005552 ORTHO05D006743 1.7e-65 253.4 236 53.4
Lsat_1_v5_gn_4_168700 Lactuca sativa HOM05D005552 ORTHO05D006743 2.2e-65 253.1 248 51.6
Rhsim01G0119100 Rhododendron simsii HOM05D005552 ORTHO05D006743 5.0e-65 251.9 245 53.9
FvH4_5g33502 Fragaria vesca HOM05D005552 ORTHO05D006743 6.5e-65 251.5 245 53.9
Eucgr.I00976 Eucalyptus grandis HOM05D005552 ORTHO05D006743 1.5e-64 250.4 245 52.2
Psat2g165040 Pisum sativum HOM05D005552 ORTHO05D006743 2.5e-64 249.6 246 53.3
Phvul.002G021300 Phaseolus vulgaris HOM05D005552 ORTHO05D006743 3.2e-64 249.2 242 52.9
Lj4C139G4 Lonicera japonica HOM05D005552 ORTHO05D006743 4.2e-64 248.8 248 54.0
Medtr5g017970 Medicago truncatula HOM05D005552 ORTHO05D006743 2.7e-63 246.1 246 53.7
Sp7g34600 Schrenkiella parvula HOM05D005552 ORTHO05D006743 2.7e-63 246.1 245 50.2
Sc16g0001610 Simmondsia chinensis HOM05D005552 ORTHO05D006743 3.6e-63 245.7 245 50.2
Aqoxy6G00889 Aquilegia oxysepala HOM05D005552 ORTHO05D006743 4.7e-63 245.4 245 50.6
Lj6g0016933 Lotus japonicus HOM05D005552 ORTHO05D006743 4.7e-63 245.4 245 52.2
AT4G37190 Arabidopsis thaliana HOM05D005552 ORTHO05D006743 6.1e-63 245.0 246 51.2
AUR62003843 Chenopodium quinoa HOM05D005552 ORTHO05D006743 8.0e-63 244.6 245 50.2
Glyma.11G058500 Glycine max HOM05D005552 ORTHO05D006743 1.0e-62 244.2 245 54.3
Thhalv10024834m.g Eutrema salsugineum HOM05D005552 ORTHO05D006743 1.4e-62 243.8 246 50.4
Carub.0007s0338 Capsella rubella HOM05D005552 ORTHO05D006743 1.8e-62 243.4 246 50.0
AL7G13990 Arabidopsis lyrata HOM05D005552 ORTHO05D006743 5.2e-62 241.9 246 51.2
AUR62001963 Chenopodium quinoa HOM05D005552 ORTHO05D006743 6.8e-62 241.5 245 51.0
VMungo1215G1500 Vigna mungo HOM05D005552 ORTHO05D006743 6.8e-62 241.5 242 52.9
PGR119G0642 Punica granatum HOM05D005552 ORTHO05D006743 9.8e-61 237.7 244 50.0
ATR0767G265 Amborella trichopoda HOM05D005552 ORTHO05D006743 1.3e-60 237.3 245 52.2
CSS0032711 Camellia sinensis var. sinensis HOM05D005552 ORTHO05D006743 1.3e-60 237.3 245 51.8
Lj2g0010083 Lotus japonicus HOM05D005552 ORTHO05D006743 2.2e-60 236.5 245 50.2
CARHR245320 Cardamine hirsuta HOM05D005552 ORTHO05D006743 4.8e-60 235.3 244 49.6
Hund16313 Selenicereus undatus HOM05D005552 ORTHO05D006743 8.3e-60 234.6 245 50.2
THA.LOC104807572 Tarenaya hassleriana HOM05D005552 ORTHO05D006743 1.8e-59 233.4 244 47.5
HPP92_017765 Vanilla planifolia HOM05D005552 ORTHO05D006743 1.8e-59 233.4 245 49.0
Aa31LG6G13810 Aethionema arabicum HOM05D005552 ORTHO05D006743 3.1e-59 232.6 245 49.4
Lalb_Chr05g0213171 Lupinus albus HOM05D005552 ORTHO05D006743 3.5e-58 229.2 245 49.8
FAN18G3771 Fragaria x ananassa HOM05D005552 ORTHO05D006743 5.9e-58 228.4 218 54.6
HanXRQChr14g0430701 Helianthus annuus HOM05D005552 ORTHO05D006743 5.9e-58 228.4 249 47.4
Zm00001eb030410 Zea mays HOM05D005552 ORTHO05D006743 5.9e-58 228.4 244 49.6
BcaNung03946 Brassica carinata HOM05D005552 ORTHO05D006743 2.3e-57 226.5 247 48.2
A03p64710 Brassica napus HOM05D005552 ORTHO05D006743 3.8e-57 225.7 244 47.1
BraA03t15535Z Brassica rapa HOM05D005552 ORTHO05D006743 3.8e-57 225.7 244 47.1
DCAR_010923 Daucus carota HOM05D005552 ORTHO05D006743 1.1e-56 224.2 245 48.6
Os03g0240900 Oryza sativa ssp. japonica HOM05D005552 ORTHO05D006743 2.5e-56 223.0 245 48.2
BcaNung04273 Brassica carinata HOM05D005552 ORTHO05D006743 6.3e-52 208.4 244 44.3
C07p62120 Brassica napus HOM05D005552 ORTHO05D006743 3.1e-51 206.1 244 43.9
BolC7t46629H Brassica oleracea HOM05D005552 ORTHO05D006743 3.1e-51 206.1 244 43.9
CDE06G0261 Ceratophyllum demersum HOM05D005552 ORTHO05D006743 5.0e-49 198.7 244 46.3
SEGI_18564 Sequoiadendron giganteum HOM05D005552 ORTHO05D006743 1.1e-48 197.6 245 42.0
Os12g0586400 Oryza sativa ssp. japonica HOM05D005552 ORTHO05D006743 1.2e-47 194.1 207 50.2
HanXRQChr04g0119841 Helianthus annuus HOM05D005552 ORTHO05D006743 8.0e-47 191.4 212 47.6
Atru.chr3.423 Acer truncatum HOM05D005552 ORTHO05D006743 8.3e-44 181.4 153 60.8
TAR376G0305 Trochodendron aralioides HOM05D005552 ORTHO05D006743 2.1e-31 140.2 139 51.1
SHI23011 Sapria himalayana HOM05D005552 ORTHO05D006743 4.7e-31 139.0 150 50.7
Mapoly0024s0139 Marchantia polymorpha HOM05D005552 ORTHO05D006743 7.8e-26 121.7 257 30.7
Psat1g136760 Pisum sativum HOM05D005552 ORTHO05D006743 6.8e-22 108.6 118 47.5
C01p02170 Brassica napus HOM05D005552 ORTHO05D006743 8.9e-22 108.2 126 46.8
BolC1t00209H Brassica oleracea HOM05D005552 ORTHO05D006743 8.9e-22 108.2 126 46.8
Pp3c2_14950 Physcomitrium patens HOM05D005552 ORTHO05D006743 2.7e-18 96.7 252 29.4
Psat5g241560 Pisum sativum HOM05D005552 ORTHO05D006743 3.9e-17 92.8 89 50.6
TAR628G0695 Trochodendron aralioides HOM05D005552 ORTHO05D006743 1.1e-16 91.3 96 49.0
Nn6g32078 Nelumbo nucifera HOM05D005552 ORTHO05D006743 1.9e-16 90.5 94 45.7
SMO358G0218 Selaginella moellendorffii HOM05D005552 ORTHO05D006743 1.9e-16 90.5 176 33.0
TAR376G0458 Trochodendron aralioides HOM05D005552 ORTHO05D006743 3.3e-16 89.7 74 60.8
FAN08G3227 Fragaria x ananassa HOM05D005552 ORTHO05D006743 2.1e-15 87.0 112 39.3
CBR_g38209 Chara braunii HOM05D005552 ORTHO05D006743 6.0e-10 68.9 285 23.9
Gohir.A11G189700 Gossypium hirsutum HOM05D005552 ORTHO05D006743 1.0e-09 68.2 62 48.4
Atru.chr2.470 Acer truncatum HOM05D005552 ORTHO05D006743 9.6e-08 61.6 51 52.9


User provided reference genes

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