Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_26.g9104 Utricularia gibba HOM05D000076 ORTHO05D419818 2.9e-125 451.8 219 100.0
Migut.J00239 Erythranthe guttata HOM05D000076 ORTHO05D001377 1.2e-28 131.0 175 49.7
unitig_22.g6588 Utricularia gibba HOM05D000076 ORTHO05D001377 6.3e-27 125.2 227 41.9
unitig_8.g3234 Utricularia gibba HOM05D000076 ORTHO05D001377 5.5e-23 112.1 218 38.1
SalBow1G7121 Salvia bowleyana HOM05D000076 ORTHO05D001377 1.0e-21 107.8 138 46.4
SGA_v2.0_scaffold85G26785 Striga asiatica HOM05D000076 ORTHO05D001377 8.8e-21 104.8 226 38.5
SGA_v2.0_scaffold75G24990 Striga asiatica HOM05D000076 ORTHO05D001377 2.6e-20 103.2 192 39.6
Oeu030541.1 Olea europaea HOM05D000076 ORTHO05D001377 9.8e-20 101.3 134 44.8
MSTRG.19037 Avicennia marina HOM05D000076 ORTHO05D001377 1.3e-19 100.9 202 37.6
MSTRG.10236 Avicennia marina HOM05D000076 ORTHO05D001377 1.7e-16 90.5 204 36.3
Lj2A83G73 Lonicera japonica HOM05D000076 ORTHO05D001377 1.5e-15 87.4 188 35.6
Oeu040804.1 Olea europaea HOM05D000076 ORTHO05D001377 7.2e-15 85.1 185 33.5
Nitab4.5_0000008g0460 Nicotiana tabacum HOM05D000076 ORTHO05D001377 2.1e-14 83.6 143 39.9
Lj3A958T68 Lonicera japonica HOM05D000076 ORTHO05D001377 2.8e-14 83.2 164 34.8
CAN.G502.2 Capsicum annuum HOM05D000076 ORTHO05D001377 4.0e-13 79.3 118 39.8
Nitab4.5_0010853g0040 Nicotiana tabacum HOM05D000076 ORTHO05D001377 6.8e-13 78.6 201 31.8
Peaxi162Scf00427g00719 Petunia axillaris HOM05D000076 ORTHO05D001377 6.8e-13 78.6 141 40.4
Sopen10g034510 Solanum pennellii HOM05D000076 ORTHO05D001377 6.8e-13 78.6 145 36.6
Nitab4.5_0000652g0120 Nicotiana tabacum HOM05D000076 ORTHO05D001377 8.8e-13 78.2 205 33.2
Nitab4.5_0004868g0030 Nicotiana tabacum HOM05D000076 ORTHO05D001377 2.6e-12 76.6 197 33.0
Dinv35522 Davidia involucrata HOM05D000076 ORTHO05D001377 5.7e-12 75.5 148 37.8
Peaxi162Scf00009g02317 Petunia axillaris HOM05D000076 ORTHO05D001377 7.5e-12 75.1 142 38.0
Nn2g11334 Nelumbo nucifera HOM05D000076 ORTHO05D001377 1.3e-11 74.3 164 34.1
Solyc10g085050.3 Solanum lycopersicum HOM05D000076 ORTHO05D001377 3.7e-11 72.8 145 34.5
CAN.G284.1 Capsicum annuum HOM05D000076 ORTHO05D001377 4.9e-11 72.4 144 36.1
PGSC0003DMG400011089 Solanum tuberosum HOM05D000076 ORTHO05D001377 4.9e-11 72.4 112 39.3
PGSC0003DMG400020335 Solanum tuberosum HOM05D000076 ORTHO05D001377 4.9e-11 72.4 177 32.2
Solyc09g011860.4 Solanum lycopersicum HOM05D000076 ORTHO05D001377 3.1e-10 69.7 179 31.3
Sopen09g006680 Solanum pennellii HOM05D000076 ORTHO05D001377 3.1e-10 69.7 179 31.3
Gohir.A04G087400 Gossypium hirsutum HOM05D000076 ORTHO05D001377 4.1e-10 69.3 224 31.7
COL.COLO4_14633 Corchorus olitorius HOM05D000076 ORTHO05D001377 5.4e-10 68.9 206 29.6
TAR369G0356 Trochodendron aralioides HOM05D000076 ORTHO05D001377 5.4e-10 68.9 191 33.0
Thecc.05G024100 Theobroma cacao HOM05D000076 ORTHO05D001377 1.2e-09 67.8 207 30.0
Migut.L01987 Erythranthe guttata HOM05D000076 ORTHO05D001377 1.7e-08 63.9 52 57.7
Ca_20100_v3 Cicer arietinum L. HOM05D000076 ORTHO05D001377 2.9e-08 63.2 149 32.9
MD04G1144500 Malus domestica HOM05D000076 ORTHO05D001377 2.9e-08 63.2 249 29.7
Cc06_g01800 Coffea canephora HOM05D000076 ORTHO05D001377 3.8e-08 62.8 153 32.0
Gohir.D04G127800 Gossypium hirsutum HOM05D000076 ORTHO05D001377 3.8e-08 62.8 210 31.9
Gorai.012G110800 Gossypium raimondii HOM05D000076 ORTHO05D001377 5.0e-08 62.4 210 31.9
Lalb_Chr07g0193421 Lupinus albus HOM05D000076 ORTHO05D001377 6.6e-08 62.0 217 30.9
Duzib093G1617 Durio zibethinus HOM05D000076 ORTHO05D001377 8.6e-08 61.6 144 34.7
CANSAT35G1249 Cannabis sativa HOM05D000076 ORTHO05D001377 1.1e-07 61.2 126 33.3
Cpa.g.sc56.94 Carica papaya HOM05D000076 ORTHO05D001377 1.1e-07 61.2 241 25.7
Haze_20930 Corylus avellana HOM05D000076 ORTHO05D001377 1.5e-07 60.8 169 33.7
CiPaw.09G204700 Carya illinoinensis HOM05D000076 ORTHO05D001377 1.9e-07 60.5 143 35.7
Medtr4g019210 Medicago truncatula HOM05D000076 ORTHO05D001377 1.9e-07 60.5 149 27.5
Rhsim04G0165100 Rhododendron simsii HOM05D000076 ORTHO05D001377 1.9e-07 60.5 107 33.6
CiPaw.10G153600 Carya illinoinensis HOM05D000076 ORTHO05D001377 3.3e-07 59.7 201 29.4
Psat7g243480 Pisum sativum HOM05D000076 ORTHO05D001377 3.3e-07 59.7 143 33.6
Lj3g0000997 Lotus japonicus HOM05D000076 ORTHO05D001377 4.3e-07 59.3 159 34.6
CSS0031365 Camellia sinensis var. sinensis HOM05D000076 ORTHO05D001377 7.3e-07 58.5 102 35.3
Glyma.01G109800 Glycine max HOM05D000076 ORTHO05D001377 7.3e-07 58.5 143 32.2
TWI53G1975 Tripterygium wilfordii HOM05D000076 ORTHO05D001377 9.5e-07 58.2 142 32.4
CSS0038873 Camellia sinensis var. sinensis HOM05D000076 ORTHO05D001377 1.2e-06 57.8 102 34.3
Phvul.010G007400 Phaseolus vulgaris HOM05D000076 ORTHO05D001377 1.2e-06 57.8 143 33.6
Rhsim05G0203200 Rhododendron simsii HOM05D000076 ORTHO05D001377 1.6e-06 57.4 90 34.4
Actinidia05348 Actinidia chinensis HOM05D000076 ORTHO05D001377 2.8e-06 56.6 103 38.8
TPR.G8184 Trifolium pratense HOM05D000076 ORTHO05D001377 3.6e-06 56.2 143 30.8
Manes.08G084200 Manihot esculenta HOM05D000076 ORTHO05D001377 4.7e-06 55.8 128 33.6
Nn2g13577 Nelumbo nucifera HOM05D000076 ORTHO05D001377 4.7e-06 55.8 101 36.6
GSVIVG01034027001 Vitis vinifera HOM05D000076 ORTHO05D001377 8.0e-06 55.1 98 37.8


User provided reference genes

Program Settings