Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_24.g30582 Utricularia gibba HOM05D004761 ORTHO05D005813 1.3e-76 289.7 148 100.0
unitig_22.g5574 Utricularia gibba HOM05D004761 ORTHO05D005813 1.1e-59 233.4 120 100.0
MSTRG.843 Avicennia marina HOM05D004761 ORTHO05D005813 8.9e-41 170.6 149 65.1
Oeu003182.1 Olea europaea HOM05D004761 ORTHO05D005813 1.2e-40 170.2 149 65.1
SGA_v2.0_scaffold170G38770 Striga asiatica HOM05D004761 ORTHO05D005813 9.8e-40 167.2 148 64.2
EL10Ac6g14394 Beta vulgaris HOM05D004761 ORTHO05D005813 1.8e-38 162.9 150 60.7
Migut.E00345 Erythranthe guttata HOM05D004761 ORTHO05D005813 1.8e-38 162.9 147 63.3
Hma1.2p1_0061F.1_g033840 Hydrangea macrophylla HOM05D004761 ORTHO05D005813 9.2e-38 160.6 149 61.1
Gohir.A03G147200 Gossypium hirsutum HOM05D004761 ORTHO05D005813 1.6e-37 159.8 151 64.2
CAN.G610.79 Capsicum annuum HOM05D004761 ORTHO05D005813 2.0e-37 159.5 151 60.3
Gohir.D02G170400 Gossypium hirsutum HOM05D004761 ORTHO05D005813 2.0e-37 159.5 151 64.2
PGSC0003DMG400014544 Solanum tuberosum HOM05D004761 ORTHO05D005813 2.0e-37 159.5 151 59.6
Sopen05g005170 Solanum pennellii HOM05D004761 ORTHO05D005813 2.7e-37 159.1 155 58.7
Cc11_g10100 Coffea canephora HOM05D004761 ORTHO05D005813 1.0e-36 157.1 154 60.4
CSS0041255 Camellia sinensis var. sinensis HOM05D004761 ORTHO05D005813 2.9e-36 155.6 149 57.7
Eucgr.G02317 Eucalyptus grandis HOM05D004761 ORTHO05D005813 6.6e-36 154.5 151 59.6
Nitab4.5_0000791g0110 Nicotiana tabacum HOM05D004761 ORTHO05D005813 6.6e-36 154.5 138 63.0
Peaxi162Scf00382g00825 Petunia axillaris HOM05D004761 ORTHO05D005813 1.1e-35 153.7 148 59.5
Nitab4.5_0003373g0010 Nicotiana tabacum HOM05D004761 ORTHO05D005813 1.5e-35 153.3 138 63.0
Duzib248G0790 Durio zibethinus HOM05D004761 ORTHO05D005813 1.9e-35 152.9 151 60.9
Ah.03g137610 Amaranthus hybridus HOM05D004761 ORTHO05D005813 2.5e-35 152.5 152 61.2
HanXRQChr15g0476311 Helianthus annuus HOM05D004761 ORTHO05D005813 2.5e-35 152.5 149 61.1
CsaV3_5G034380 Cucumis sativus L. HOM05D004761 ORTHO05D005813 7.3e-35 151.0 148 58.8
Ciclev10016274m.g Citrus clementina HOM05D004761 ORTHO05D005813 1.6e-34 149.8 127 64.6
Gorai.005G191400 Gossypium raimondii HOM05D004761 ORTHO05D005813 1.6e-34 149.8 125 68.8
CANSAT01G0623 Cannabis sativa HOM05D004761 ORTHO05D005813 2.1e-34 149.4 146 58.2
Dinv21082 Davidia involucrata HOM05D004761 ORTHO05D005813 2.8e-34 149.1 148 58.1
TWI31G0637 Tripterygium wilfordii HOM05D004761 ORTHO05D005813 2.8e-34 149.1 152 58.6
Thecc.02G229900 Theobroma cacao HOM05D004761 ORTHO05D005813 3.6e-34 148.7 151 60.9
TAR629G2706 Trochodendron aralioides HOM05D004761 ORTHO05D005813 3.6e-34 148.7 151 60.3
Cfa018591 Carpinus fangiana HOM05D004761 ORTHO05D005813 4.7e-34 148.3 149 59.7
Haze_17489 Corylus avellana HOM05D004761 ORTHO05D005813 4.7e-34 148.3 149 59.7
Cpa.g.sc1.34 Carica papaya HOM05D004761 ORTHO05D005813 6.1e-34 147.9 152 57.2
ClCG05G022660 Citrullus lanatus HOM05D004761 ORTHO05D005813 6.1e-34 147.9 150 60.7
GSVIVG01011891001 Vitis vinifera HOM05D004761 ORTHO05D005813 6.1e-34 147.9 148 59.5
Ah.02g127920 Amaranthus hybridus HOM05D004761 ORTHO05D005813 8.0e-34 147.5 153 58.2
Hund25060 Selenicereus undatus HOM05D004761 ORTHO05D005813 1.0e-33 147.1 150 58.0
Psat6g225000 Pisum sativum HOM05D004761 ORTHO05D005813 1.4e-33 146.7 136 61.0
Prupe.1G311800 Prunus persica HOM05D004761 ORTHO05D005813 1.4e-33 146.7 147 61.9
Lsat_1_v5_gn_3_59080 Lactuca sativa HOM05D004761 ORTHO05D005813 1.8e-33 146.4 151 58.9
QL01p042268 Quercus lobata HOM05D004761 ORTHO05D005813 1.8e-33 146.4 148 58.1
Medtr1g110750 Medicago truncatula HOM05D004761 ORTHO05D005813 3.0e-33 145.6 136 61.8
PGR119G1215 Punica granatum HOM05D004761 ORTHO05D005813 3.0e-33 145.6 133 63.9
Glyma.20G116100 Glycine max HOM05D004761 ORTHO05D005813 5.2e-33 144.8 136 64.7
CiPaw.16G065200 Carya illinoinensis HOM05D004761 ORTHO05D005813 6.8e-33 144.4 148 58.8
DCAR_023656 Daucus carota HOM05D004761 ORTHO05D005813 6.8e-33 144.4 151 57.0
Sed0020611 Sechium edule HOM05D004761 ORTHO05D005813 6.8e-33 144.4 148 57.4
MELO3C012254.2 Cucumis melo HOM05D004761 ORTHO05D005813 1.2e-32 143.7 148 58.1
Lj3C1014G6 Lonicera japonica HOM05D004761 ORTHO05D005813 1.2e-32 143.7 124 64.5
TPR.G18808 Trifolium pratense HOM05D004761 ORTHO05D000002 1.2e-32 143.7 136 59.6
Sc11g0003470 Simmondsia chinensis HOM05D004761 ORTHO05D005813 2.0e-32 142.9 149 58.4
Aqoxy3G00293 Aquilegia oxysepala HOM05D004761 ORTHO05D005813 2.6e-32 142.5 149 55.0
FAN07G1541 Fragaria x ananassa HOM05D004761 ORTHO05D005813 2.6e-32 142.5 147 59.2
Gohir.D11G344800 Gossypium hirsutum HOM05D004761 ORTHO05D005813 5.8e-32 141.4 127 62.2
Gorai.007G375200 Gossypium raimondii HOM05D004761 ORTHO05D005813 5.8e-32 141.4 127 62.2
Actinidia16656 Actinidia chinensis HOM05D004761 ORTHO05D005813 7.5e-32 141.0 150 56.7
MD16G1042300 Malus domestica HOM05D004761 ORTHO05D005813 1.3e-31 140.2 148 56.8
Nn4g24161 Nelumbo nucifera HOM05D004761 ORTHO05D005813 1.3e-31 140.2 149 57.7
TWI79G0635 Tripterygium wilfordii HOM05D004761 ORTHO05D005813 1.3e-31 140.2 152 59.2
ECA246G4195 Erigeron canadensis HOM05D004761 ORTHO05D005813 1.7e-31 139.8 148 54.7
FvH4_4g27310 Fragaria vesca HOM05D004761 ORTHO05D005813 2.2e-31 139.4 147 57.8
FAN12G1206 Fragaria x ananassa HOM05D004761 ORTHO05D005813 2.2e-31 139.4 147 57.8
FAN12G1874 Fragaria x ananassa HOM05D004761 ORTHO05D005813 2.2e-31 139.4 147 57.8
FAN22G1660 Fragaria x ananassa HOM05D004761 ORTHO05D005813 2.2e-31 139.4 147 58.5
HanXRQChr17g0552301 Helianthus annuus HOM05D004761 ORTHO05D005813 2.9e-31 139.0 74 91.9
Manes.14G102900 Manihot esculenta HOM05D004761 ORTHO05D005813 2.9e-31 139.0 127 65.4
PSO675G3483 Papaver somniferum HOM05D004761 ORTHO05D005813 2.9e-31 139.0 147 57.1
PSO717G0038 Papaver somniferum HOM05D004761 ORTHO05D005813 2.9e-31 139.0 148 57.4
Sabra08G0091800 Salix brachista HOM05D004761 ORTHO05D005813 3.7e-31 138.7 147 57.8
MD13G1041400 Malus domestica HOM05D004761 ORTHO05D005813 4.9e-31 138.3 152 53.9
AUR62035212 Chenopodium quinoa HOM05D004761 ORTHO05D005813 8.3e-31 137.5 81 85.2
arahy.Tifrunner.gnm1.ann1.8WFG9Z Arachis hypogaea HOM05D004761 ORTHO05D005813 1.1e-30 137.1 124 62.9
arahy.Tifrunner.gnm1.ann1.QJ0JEK Arachis hypogaea HOM05D004761 ORTHO05D005813 1.1e-30 137.1 124 62.9
SEGI_01542 Sequoiadendron giganteum HOM05D004761 ORTHO05D005813 1.1e-30 137.1 147 57.1
CDE05G0568 Ceratophyllum demersum HOM05D004761 ORTHO05D005813 1.9e-30 136.3 146 56.2
Potri.008G121100 Populus trichocarpa HOM05D004761 ORTHO05D005813 1.9e-30 136.3 126 63.5
VMungo0720G0616 Vigna mungo HOM05D004761 ORTHO05D005813 2.4e-30 136.0 128 60.9
Lj5g0002032 Lotus japonicus HOM05D004761 ORTHO05D005813 3.2e-30 135.6 147 57.8
HPP92_009407 Vanilla planifolia HOM05D004761 ORTHO05D005813 4.1e-30 135.2 144 58.3
arahy.Tifrunner.gnm1.ann1.BGN30W Arachis hypogaea HOM05D004761 ORTHO05D005813 5.4e-30 134.8 144 56.9
AUR62002860 Chenopodium quinoa HOM05D004761 ORTHO05D005813 7.0e-30 134.4 75 89.3
Phvul.007G027600 Phaseolus vulgaris HOM05D004761 ORTHO05D005813 1.2e-29 133.7 127 60.6
arahy.Tifrunner.gnm1.ann1.B0KB7I Arachis hypogaea HOM05D004761 ORTHO05D005813 1.6e-29 133.3 84 81.0
Rhsim09G0107700 Rhododendron simsii HOM05D004761 ORTHO05D005813 1.6e-29 133.3 148 53.4
CDE05G1514 Ceratophyllum demersum HOM05D004761 ORTHO05D005813 3.5e-29 132.1 146 54.8
THA.LOC104825698 Tarenaya hassleriana HOM05D004761 ORTHO05D005813 3.5e-29 132.1 151 55.0
HPP92_009433 Vanilla planifolia HOM05D004761 ORTHO05D005813 6.0e-29 131.3 92 75.0
C09p32130 Brassica napus HOM05D004761 ORTHO05D005813 7.8e-29 131.0 133 58.6
Potri.010G124301 Populus trichocarpa HOM05D004761 ORTHO05D005813 1.0e-28 130.6 126 59.5
BcaC04g21408 Brassica carinata HOM05D004761 ORTHO05D005813 1.3e-28 130.2 133 57.9
BolC9t56063H Brassica oleracea HOM05D004761 ORTHO05D005813 1.3e-28 130.2 133 57.9
Thhalv10004759m.g Eutrema salsugineum HOM05D004761 ORTHO05D005813 1.3e-28 130.2 133 58.6
RcHm_v2.0_Chr4g0435111 Rosa chinensis HOM05D004761 ORTHO05D005813 1.3e-28 130.2 147 56.5
BcaB07g30626 Brassica carinata HOM05D004761 ORTHO05D005813 2.3e-28 129.4 126 58.7
BraA09t38096Z Brassica rapa HOM05D004761 ORTHO05D005813 5.0e-28 128.3 133 59.4
Sp2g15160 Schrenkiella parvula HOM05D004761 ORTHO05D005813 5.0e-28 128.3 133 54.9
Lalb_Chr21g0308901 Lupinus albus HOM05D004761 ORTHO05D005813 6.6e-28 127.9 71 90.1
Os03g0219900 Oryza sativa ssp. japonica HOM05D004761 ORTHO05D005813 6.6e-28 127.9 93 75.3
ATR0171G026 Amborella trichopoda HOM05D004761 ORTHO05D005813 1.1e-27 127.1 70 91.4
BcaC06g31103 Brassica carinata HOM05D004761 ORTHO05D005813 1.1e-27 127.1 127 55.9
Aa31LG2G6400 Aethionema arabicum HOM05D004761 ORTHO05D005813 1.9e-27 126.3 130 56.9
Zm00001eb008910 Zea mays HOM05D004761 ORTHO05D005813 1.9e-27 126.3 87 73.6
A09p25090 Brassica napus HOM05D004761 ORTHO05D005813 2.5e-27 125.9 130 60.0
Lalb_Chr02g0145941 Lupinus albus HOM05D004761 ORTHO05D005813 3.3e-27 125.6 70 90.0
C07p34980 Brassica napus HOM05D004761 ORTHO05D005813 4.3e-27 125.2 128 55.5
AL5G14580 Arabidopsis lyrata HOM05D004761 ORTHO05D005813 5.6e-27 124.8 129 55.8
AT3G25920 Arabidopsis thaliana HOM05D004761 ORTHO05D005813 5.6e-27 124.8 153 52.3
Carub.0005s0378 Capsella rubella HOM05D004761 ORTHO05D005813 5.6e-27 124.8 129 56.6
BcaC06g33937 Brassica carinata HOM05D004761 ORTHO05D005813 7.3e-27 124.4 129 55.0
BolC7t44030H Brassica oleracea HOM05D004761 ORTHO05D005813 7.3e-27 124.4 129 55.0
CARHR146910 Cardamine hirsuta HOM05D004761 ORTHO05D005813 7.3e-27 124.4 130 55.4
Pp3c23_7670 Physcomitrium patens HOM05D004761 ORTHO05D005813 9.5e-27 124.0 148 54.1
Pp3c20_9200 Physcomitrium patens HOM05D004761 ORTHO05D005813 2.1e-26 122.9 144 54.2
vmacro10560 Vaccinium macrocarpon HOM05D004761 ORTHO05D005813 2.8e-26 122.5 70 87.1
A06p42360 Brassica napus HOM05D004761 ORTHO05D005813 3.6e-26 122.1 151 53.0
BraA06t27151Z Brassica rapa HOM05D004761 ORTHO05D005813 3.6e-26 122.1 151 53.0
Pp3c24_11450 Physcomitrium patens HOM05D004761 ORTHO05D005813 4.7e-26 121.7 127 59.1
SMO203G0084 Selaginella moellendorffii HOM05D004761 ORTHO05D005813 8.0e-26 120.9 70 84.3
Pp3c8_18220 Physcomitrium patens HOM05D004761 ORTHO05D005813 1.1e-25 120.6 81 79.0
AagrBONN_evm.TU.Sc2ySwM_228.2844 Anthoceros agrestis HOM05D004761 ORTHO05D005813 4.0e-25 118.6 94 70.2
CBR_g6324 Chara braunii HOM05D004761 ORTHO05D005813 6.8e-25 117.9 88 71.6
Mapoly0065s0007 Marchantia polymorpha HOM05D004761 ORTHO05D005813 1.2e-24 117.1 70 84.3
Cre14.g612450 Chlamydomonas reinhardtii HOM05D004761 ORTHO05D005813 4.4e-24 115.2 101 64.4
COL.COLO4_29942 Corchorus olitorius HOM05D004761 ORTHO05D005813 5.8e-24 114.8 61 91.8
Hma1.2p1_0798F.1_g219870 Hydrangea macrophylla HOM05D004761 ORTHO05D005813 4.1e-22 108.6 72 79.2
PRCOL_00000889 Prasinoderma coloniale HOM05D004761 ORTHO05D005813 2.7e-21 105.9 75 69.3
MBI19_g21031_MAGBIO Magnolia biondii HOM05D004761 ORTHO05D005813 1.1e-19 100.5 54 92.6
Nn3g17852 Nelumbo nucifera HOM05D004761 ORTHO05D005813 3.3e-19 99.0 67 74.6
TPR.G862 Trifolium pratense HOM05D004761 ORTHO05D005813 2.8e-18 95.9 53 86.8
Oeu056574.1 Olea europaea HOM05D004761 ORTHO05D037944 6.4e-15 84.7 85 57.6
Aqoxy5G02814 Aquilegia oxysepala HOM05D004761 ORTHO05D005813 8.3e-15 84.3 44 90.9
Atru.chr11.97 Acer truncatum HOM05D004761 ORTHO05D005813 1.6e-13 80.1 119 51.3
Nn4g23851 Nelumbo nucifera HOM05D004761 ORTHO05D005813 5.1e-12 75.1 65 64.6
Solyc05g009370.4 Solanum lycopersicum HOM05D004761 ORTHO05D005813 1.9e-11 73.2 35 97.1
Ca_11170_v3 Cicer arietinum L. HOM05D004761 ORTHO05D005813 2.8e-10 69.3 35 88.6
PRCOL_00002014 Prasinoderma coloniale HOM05D005288 ORTHO05D006574 2.8e-10 69.3 99 44.4
Sabra10G0094300 Salix brachista HOM05D004761 ORTHO05D005813 2.8e-10 69.3 35 91.4
Atru.chr2.2517 Acer truncatum HOM05D004761 ORTHO05D005813 2.4e-09 66.2 35 88.6
MCO09G351 Micromonas commoda HOM05D004761 ORTHO05D005813 1.2e-08 63.9 35 82.9
Haze_26805 Corylus avellana HOM05D005288 ORTHO05D006574 3.4e-08 62.4 62 54.8
SGA_v2.0_scaffold146G36155 Striga asiatica HOM05D005288 ORTHO05D006574 2.2e-07 59.7 131 37.4
Pp3c25_6490 Physcomitrium patens HOM05D005288 ORTHO05D006574 6.4e-07 58.2 61 54.1
AUR62037110 Chenopodium quinoa HOM05D005288 ORTHO05D006574 1.1e-06 57.4 128 35.9
Zm00001eb129960 Zea mays HOM05D005288 ORTHO05D006574 1.1e-06 57.4 86 41.9
SGA_v2.0_scaffold76G25165 Striga asiatica HOM05D005288 ORTHO05D006574 1.9e-06 56.6 130 36.2
MSTRG.23423 Avicennia marina HOM05D005288 ORTHO05D006574 2.4e-06 56.2 130 34.6
Os08g0310100 Oryza sativa ssp. japonica HOM05D005288 ORTHO05D006574 2.4e-06 56.2 82 45.1
Atru.chr2.2498 Acer truncatum HOM05D004761 ORTHO05D037944 3.2e-06 55.8 32 81.2
Actinidia14895 Actinidia chinensis HOM05D004761 ORTHO05D005813 4.2e-06 55.5 103 39.8
Hund15173 Selenicereus undatus HOM05D005288 ORTHO05D006574 4.2e-06 55.5 61 52.5
Dinv09930 Davidia involucrata HOM05D005288 ORTHO05D006574 5.4e-06 55.1 134 35.8
unitig_27.g25064 Utricularia gibba HOM05D005288 ORTHO05D006574 5.4e-06 55.1 61 50.8
Ah.12g062320 Amaranthus hybridus HOM05D005288 ORTHO05D006574 9.2e-06 54.3 127 34.6
Migut.H01124 Erythranthe guttata HOM05D005288 ORTHO05D006574 9.2e-06 54.3 70 47.1


User provided reference genes

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