Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g2843 Utricularia gibba HOM05D047057 ORTHO05D004714 1.2e-124 449.9 236 100.0
MSTRG.25678 Avicennia marina HOM05D003962 ORTHO05D004714 2.7e-23 113.2 269 35.7
unitig_88.g27641 Utricularia gibba HOM05D047057 ORTHO05D004714 2.5e-21 106.7 186 46.8
Migut.A00639 Erythranthe guttata HOM05D003962 ORTHO05D004714 7.3e-21 105.1 252 36.5
SGA_v2.0_scaffold305G47981 Striga asiatica HOM05D003962 ORTHO05D004714 5.8e-18 95.5 251 35.1
SalBow1G2835 Salvia bowleyana HOM05D003962 ORTHO05D004714 1.4e-16 90.9 252 31.0
SalBow1G4038 Salvia bowleyana HOM05D003962 ORTHO05D004714 1.4e-16 90.9 252 31.0
CSS0016674 Camellia sinensis var. sinensis HOM05D003962 ORTHO05D004714 6.0e-15 85.5 289 29.1
CSS0043367 Camellia sinensis var. sinensis HOM05D003962 ORTHO05D004714 6.0e-15 85.5 289 29.1
Oeu054025.1 Olea europaea HOM05D003962 ORTHO05D004714 1.0e-14 84.7 281 28.1
Cc08_g16110 Coffea canephora HOM05D003962 ORTHO05D004714 3.9e-14 82.8 280 28.9
Dinv38828 Davidia involucrata HOM05D003962 ORTHO05D004714 1.5e-13 80.9 83 49.4
Actinidia22731 Actinidia chinensis HOM05D003962 ORTHO05D004714 4.3e-13 79.3 280 28.6
MSTRG.13886 Avicennia marina HOM05D003962 ORTHO05D004714 5.6e-13 79.0 279 29.7
Rhsim02G0244100 Rhododendron simsii HOM05D003962 ORTHO05D004714 7.3e-13 78.6 277 27.4
Nitab4.5_0006775g0080 Nicotiana tabacum HOM05D003962 ORTHO05D004714 9.5e-13 78.2 281 31.0
unitig_88.g27642 Utricularia gibba HOM05D003962 ORTHO05D004714 9.5e-13 78.2 51 72.5
Dinv37529 Davidia involucrata HOM05D003962 ORTHO05D004714 8.1e-12 75.1 290 28.6
vmacro11467 Vaccinium macrocarpon HOM05D003962 ORTHO05D004714 1.8e-11 73.9 278 27.7
HanXRQChr17g0534811 Helianthus annuus HOM05D003962 ORTHO05D004714 4.0e-11 72.8 233 29.2
Hma1.2p1_0359F.1_g135210 Hydrangea macrophylla HOM05D003962 ORTHO05D004714 4.0e-11 72.8 283 29.3
CSS0006905 Camellia sinensis var. sinensis HOM05D003962 ORTHO05D004714 6.8e-11 72.0 289 29.1
Oeu063516.1 Olea europaea HOM05D003962 ORTHO05D004714 3.4e-10 69.7 275 29.5
SGA_v2.0_scaffold96G29015 Striga asiatica HOM05D003962 ORTHO05D004714 7.6e-10 68.6 278 29.1
vmacro11359 Vaccinium macrocarpon HOM05D003962 ORTHO05D004714 9.9e-10 68.2 81 44.4
vmacro11465 Vaccinium macrocarpon HOM05D003962 ORTHO05D004714 9.9e-10 68.2 81 44.4
Lj2A167T45 Lonicera japonica HOM05D003962 ORTHO05D004714 1.3e-09 67.8 226 27.0
Nitab4.5_0001210g0080 Nicotiana tabacum HOM05D003962 ORTHO05D004714 3.7e-09 66.2 90 40.0
GSVIVG01019537001 Vitis vinifera HOM05D003962 ORTHO05D005685 6.4e-09 65.5 109 36.7
Actinidia04199 Actinidia chinensis HOM05D003962 ORTHO05D004714 8.4e-09 65.1 79 43.0
TAR374G0911 Trochodendron aralioides HOM05D003962 ORTHO05D004714 1.4e-08 64.3 89 39.3
Nitab4.5_0002944g0030 Nicotiana tabacum HOM05D003962 ORTHO05D004714 2.4e-08 63.5 272 27.6
HanXRQChr06g0166431 Helianthus annuus HOM05D003962 ORTHO05D004714 5.4e-08 62.4 237 29.5
CAN.G1804.9 Capsicum annuum HOM05D003962 ORTHO05D004714 7.1e-08 62.0 281 29.9
Actinidia27315 Actinidia chinensis HOM05D003962 ORTHO05D004714 1.2e-07 61.2 169 33.1
PGR042G1008 Punica granatum HOM05D003962 ORTHO05D004714 1.2e-07 61.2 270 30.0
TWI39G0414 Tripterygium wilfordii HOM05D003962 ORTHO05D004714 1.6e-07 60.8 85 37.6
DCAR_029893 Daucus carota HOM05D003962 ORTHO05D004714 2.7e-07 60.1 278 28.8
Rhsim02G0244200 Rhododendron simsii HOM05D003962 ORTHO05D004714 2.7e-07 60.1 76 40.8
Oeu009961.1 Olea europaea HOM05D003962 ORTHO05D004714 3.5e-07 59.7 290 28.3
Peaxi162Scf00074g00821 Petunia axillaris HOM05D003962 ORTHO05D004714 3.5e-07 59.7 87 41.4
TWI23G0430 Tripterygium wilfordii HOM05D003962 ORTHO05D004714 4.6e-07 59.3 88 38.6
ECA246G1296 Erigeron canadensis HOM05D003962 ORTHO05D004714 6.0e-07 58.9 252 26.2
TWI14G0330 Tripterygium wilfordii HOM05D003962 ORTHO05D004714 6.0e-07 58.9 107 35.5
TAR629G3347 Trochodendron aralioides HOM05D003962 ORTHO05D004714 6.0e-07 58.9 89 36.0
Nitab4.5_0007367g0070 Nicotiana tabacum HOM05D003962 ORTHO05D004714 7.8e-07 58.5 84 38.1
vmacro11361 Vaccinium macrocarpon HOM05D003962 ORTHO05D004714 1.0e-06 58.2 249 26.9
CiPaw.05G251700 Carya illinoinensis HOM05D003962 ORTHO05D004714 1.3e-06 57.8 87 36.8
Haze_00190 Corylus avellana HOM05D003962 ORTHO05D004714 1.3e-06 57.8 86 38.4
Manes.06G159800 Manihot esculenta HOM05D003962 ORTHO05D004714 1.3e-06 57.8 307 25.1
PGSC0003DMG400012278 Solanum tuberosum HOM05D003962 ORTHO05D004714 1.3e-06 57.8 90 38.9
TAR375G1139 Trochodendron aralioides HOM05D003962 ORTHO05D004714 1.3e-06 57.8 90 36.7
Ciclev10004179m.g Citrus clementina HOM05D003962 ORTHO05D004714 1.7e-06 57.4 300 25.0
Potri.015G014800 Populus trichocarpa HOM05D003962 ORTHO05D004714 3.0e-06 56.6 296 26.0
QL09p009481 Quercus lobata HOM05D003962 ORTHO05D004714 3.0e-06 56.6 86 38.4
Cfa016250 Carpinus fangiana HOM05D003962 ORTHO05D004714 3.9e-06 56.2 97 36.1
Lalb_Chr23g0271551 Lupinus albus HOM05D003962 ORTHO05D004714 3.9e-06 56.2 284 27.1


User provided reference genes

Program Settings