Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g2798 Utricularia gibba HOM05D007469 ORTHO05D003360 6.1e-135 484.6 324 100.0
MSTRG.15502 Avicennia marina HOM05D007469 ORTHO05D003360 4.8e-47 192.6 324 60.5
Oeu047333.1 Olea europaea HOM05D007469 ORTHO05D003360 6.9e-46 188.7 311 59.5
SGA_v2.0_scaffold30G12492 Striga asiatica HOM05D007469 ORTHO05D003360 1.3e-36 157.9 277 63.5
A04p13090 Brassica napus HOM05D007469 ORTHO05D003360 3.5e-34 149.8 251 65.7
Sp7g01840 Schrenkiella parvula HOM05D007469 ORTHO05D003360 4.6e-34 149.4 250 64.0
Lj7C409T15 Lonicera japonica HOM05D007469 ORTHO05D003360 6.0e-34 149.1 265 55.1
AT5G40160 Arabidopsis thaliana HOM05D007469 ORTHO05D003360 2.3e-33 147.1 316 54.1
EL10Ac8g18402 Beta vulgaris HOM05D007469 ORTHO05D003360 8.7e-33 145.2 153 49.7
CARHR261930 Cardamine hirsuta HOM05D007469 ORTHO05D003360 8.7e-33 145.2 315 54.9
Rhsim10G0026300 Rhododendron simsii HOM05D007469 ORTHO05D003360 8.7e-33 145.2 216 70.4
BcaB06g27455 Brassica carinata HOM05D007469 ORTHO05D003360 1.1e-32 144.8 250 61.2
AL7G49850 Arabidopsis lyrata HOM05D007469 ORTHO05D003360 9.6e-32 141.7 317 53.6
Ciclev10013529m.g Citrus clementina HOM05D007469 ORTHO05D003360 1.6e-31 141.0 255 60.0
C04p46840 Brassica napus HOM05D007469 ORTHO05D003360 2.1e-31 140.6 250 64.4
BolC4t26272H Brassica oleracea HOM05D007469 ORTHO05D003360 2.1e-31 140.6 250 64.4
BraA04t16968Z Brassica rapa HOM05D007469 ORTHO05D003360 2.1e-31 140.6 250 60.0
Thhalv10027842m.g Eutrema salsugineum HOM05D007469 ORTHO05D003360 6.2e-31 139.0 251 62.9
Aqoxy3G00905 Aquilegia oxysepala HOM05D007469 ORTHO05D003360 8.2e-31 138.7 256 60.9
Carub.0007s3552 Capsella rubella HOM05D007469 ORTHO05D003360 1.4e-30 137.9 330 52.4
CANSAT64G2834 Cannabis sativa HOM05D007469 ORTHO05D003360 4.1e-30 136.3 317 55.5
Nn4g22877 Nelumbo nucifera HOM05D007469 ORTHO05D003360 4.1e-30 136.3 223 69.5
CiPaw.03G035300 Carya illinoinensis HOM05D007469 ORTHO05D003360 6.9e-30 135.6 250 63.2
Aa31LG9G1510 Aethionema arabicum HOM05D007469 ORTHO05D003360 1.2e-29 134.8 279 39.8
CANSAT64G0136 Cannabis sativa HOM05D007469 ORTHO05D003360 1.2e-29 134.8 313 55.9
Hma1.2p1_0697F.1_g204960 Hydrangea macrophylla HOM05D007469 ORTHO05D003360 1.5e-29 134.4 233 63.9
Peaxi162Scf00290g00012 Petunia axillaris HOM05D007469 ORTHO05D003360 2.0e-29 134.0 279 59.5
Atru.chr8.2427 Acer truncatum HOM05D007469 ORTHO05D003360 4.5e-29 132.9 261 60.5
Dinv35031 Davidia involucrata HOM05D000028 ORTHO05D000390 5.8e-29 132.5 157 49.0
DCAR_013974 Daucus carota HOM05D007469 ORTHO05D003360 7.6e-29 132.1 251 63.3
Sabra16G0184600 Salix brachista HOM05D007469 ORTHO05D003360 1.3e-28 131.3 294 53.1
Hund20037 Selenicereus undatus HOM05D007469 ORTHO05D009499 2.2e-28 130.6 142 52.1
Manes.15G180348 Manihot esculenta HOM05D007469 ORTHO05D003360 3.8e-28 129.8 255 58.8
TWI56G0985 Tripterygium wilfordii HOM05D005889 ORTHO05D007495 3.8e-28 129.8 278 53.2
SalBow7G0002 Salvia bowleyana HOM05D007469 ORTHO05D003360 5.0e-28 129.4 296 56.1
Ah.10g030590 Amaranthus hybridus HOM05D007469 ORTHO05D003360 2.5e-27 127.1 159 45.9
Cc02_g31090 Coffea canephora HOM05D007469 ORTHO05D003360 2.5e-27 127.1 252 61.9
Migut.K01363 Erythranthe guttata HOM05D007469 ORTHO05D003360 3.2e-27 126.7 205 70.2
arahy.Tifrunner.gnm1.ann1.5026CX Arachis hypogaea HOM05D007469 ORTHO05D003360 4.2e-27 126.3 261 53.6
GSVIVG01032525001 Vitis vinifera HOM05D007469 ORTHO05D003360 5.5e-27 125.9 229 64.2
AUR62010918 Chenopodium quinoa HOM05D004175 ORTHO05D004664 9.3e-27 125.2 142 51.4
PGR083G2689 Punica granatum HOM05D007469 ORTHO05D003360 9.3e-27 125.2 144 47.2
Prupe.3G132600 Prunus persica HOM05D007469 ORTHO05D003360 1.2e-26 124.8 254 61.0
Sc18g0006210 Simmondsia chinensis HOM05D007469 ORTHO05D003360 1.2e-26 124.8 194 39.7
arahy.Tifrunner.gnm1.ann1.RR2C2G Arachis hypogaea HOM05D007469 ORTHO05D003360 3.5e-26 123.2 284 50.4
Haze_14632 Corylus avellana HOM05D007469 ORTHO05D003360 7.9e-26 122.1 251 62.5
Duzib264G1016 Durio zibethinus HOM05D007469 ORTHO05D003360 1.3e-25 121.3 294 55.1
Thecc.04G004300 Theobroma cacao HOM05D007469 ORTHO05D003360 3.0e-25 120.2 254 57.9
Actinidia06038 Actinidia chinensis HOM05D007469 ORTHO05D003360 5.1e-25 119.4 226 62.8
AUR62021431 Chenopodium quinoa HOM05D007469 ORTHO05D003360 6.7e-25 119.0 141 50.4
Glyma.18G044300 Glycine max HOM05D007469 ORTHO05D003360 6.7e-25 119.0 278 56.8
Eucgr.J02176 Eucalyptus grandis HOM05D007469 ORTHO05D003360 8.7e-25 118.6 144 48.6
QL02p077481 Quercus lobata HOM05D007469 ORTHO05D003360 8.7e-25 118.6 306 52.9
CSS0038198 Camellia sinensis var. sinensis HOM05D007469 ORTHO05D003360 1.1e-24 118.2 269 54.6
Psat0s5166g0040 Pisum sativum HOM05D007469 ORTHO05D003360 1.1e-24 118.2 272 57.0
THA.LOC104805414 Tarenaya hassleriana HOM05D007469 ORTHO05D003360 1.1e-24 118.2 257 54.9
TAR371G0800 Trochodendron aralioides HOM05D007469 ORTHO05D003360 2.5e-24 117.1 322 51.2
Dinv33523 Davidia involucrata HOM05D007469 ORTHO05D003360 4.3e-24 116.3 252 61.1
Nitab4.5_0004567g0040 Nicotiana tabacum HOM05D007469 ORTHO05D003360 4.3e-24 116.3 217 65.9
Glyma.11G211316 Glycine max HOM05D007469 ORTHO05D003360 5.7e-24 115.9 284 54.2
Gohir.D07G225500 Gossypium hirsutum HOM05D007469 ORTHO05D003360 9.7e-24 115.2 253 61.7
Gorai.001G259900 Gossypium raimondii HOM05D007469 ORTHO05D003360 9.7e-24 115.2 253 62.1
RcHm_v2.0_Chr7g0226491 Rosa chinensis HOM05D007469 ORTHO05D003360 9.7e-24 115.2 286 54.9
ATR1159G025 Amborella trichopoda HOM05D007469 ORTHO05D003360 1.3e-23 114.8 283 52.7
TPR.G666 Trifolium pratense HOM05D007469 ORTHO05D003360 2.2e-23 114.0 271 53.5
FvH4_5g31250 Fragaria vesca HOM05D007469 ORTHO05D003360 2.8e-23 113.6 257 59.5
Cfa007462 Carpinus fangiana HOM05D007469 ORTHO05D003360 3.7e-23 113.2 251 61.0
MELO3C021518.2 Cucumis melo HOM05D007469 ORTHO05D003360 6.3e-23 112.5 262 53.8
HanXRQChr15g0488381 Helianthus annuus HOM05D007469 ORTHO05D003360 6.3e-23 112.5 126 50.0
Lj1g0016351 Lotus japonicus HOM05D007469 ORTHO05D003360 6.3e-23 112.5 268 57.8
CAN.G824.9 Capsicum annuum HOM05D007469 ORTHO05D003360 8.2e-23 112.1 250 60.4
Gohir.A07G218400 Gossypium hirsutum HOM05D007469 ORTHO05D003360 1.1e-22 111.7 254 60.6
Rhsim10G0026800 Rhododendron simsii HOM05D007469 ORTHO05D003360 1.1e-22 111.7 143 45.5
Sed0015996 Sechium edule HOM05D007469 ORTHO05D003360 1.4e-22 111.3 258 60.1
Lsat_1_v5_gn_4_181880 Lactuca sativa HOM05D007469 ORTHO05D003360 1.8e-22 110.9 128 48.4
Lalb_Chr08g0233251 Lupinus albus HOM05D007469 ORTHO05D003360 1.8e-22 110.9 271 57.6
CsaV3_5G037380 Cucumis sativus L. HOM05D007469 ORTHO05D003360 4.1e-22 109.8 254 56.7
CSS0050487 Camellia sinensis var. sinensis HOM05D007469 ORTHO05D003360 1.2e-21 108.2 125 47.2
Nitab4.5_0001969g0030 Nicotiana tabacum HOM05D007469 ORTHO05D003360 1.5e-21 107.8 282 56.7
Actinidia36064 Actinidia chinensis HOM05D007469 ORTHO05D003360 4.5e-21 106.3 214 60.3
CDE10G0535 Ceratophyllum demersum HOM05D007469 ORTHO05D003360 7.7e-21 105.5 198 63.1
Medtr2g048680 Medicago truncatula HOM05D007469 ORTHO05D003360 1.0e-20 105.1 178 39.9
VMungo0540G0432 Vigna mungo HOM05D007469 ORTHO05D003360 2.9e-20 103.6 259 56.0
Potri.001G295200 Populus trichocarpa HOM05D007469 ORTHO05D003360 3.8e-20 103.2 283 50.9
Cpa.g.sc88.45 Carica papaya HOM05D007469 ORTHO05D003360 6.5e-20 102.4 193 69.4
ECA232G1734 Erigeron canadensis HOM05D000006 ORTHO05D000001 8.5e-20 102.1 116 47.4
ClCG00G005290 Citrullus lanatus HOM05D007469 ORTHO05D003360 1.4e-19 101.3 140 47.1
ClCG09G018690 Citrullus lanatus HOM05D007469 ORTHO05D003360 1.4e-19 101.3 140 47.1
ClCG09G018760 Citrullus lanatus HOM05D007469 ORTHO05D003360 1.4e-19 101.3 140 47.1
Phvul.006G086600 Phaseolus vulgaris HOM05D007469 ORTHO05D003360 4.2e-19 99.8 259 55.6
Ca_02547_v3 Cicer arietinum L. HOM05D007469 ORTHO05D003360 7.2e-19 99.0 261 56.3
COL.COLO4_32001 Corchorus olitorius HOM05D005889 ORTHO05D007495 2.1e-18 97.4 78 62.8
MBI14_g12788_MAGBIO Magnolia biondii HOM05D007469 ORTHO05D003360 1.4e-17 94.7 202 66.3
Solyc09g009290.3 Solanum lycopersicum HOM05D007469 ORTHO05D003360 3.3e-16 90.1 197 37.6
HPP92_010841 Vanilla planifolia HOM05D007469 ORTHO05D003360 1.3e-15 88.2 159 37.7
Sopen09g004030 Solanum pennellii HOM05D007469 ORTHO05D003360 2.8e-15 87.0 197 35.5
PSO161G0131 Papaver somniferum HOM05D007469 ORTHO05D003360 3.7e-15 86.7 128 43.0
MD05G1026500 Malus domestica HOM05D007469 ORTHO05D003360 3.4e-13 80.1 192 31.8
Zm00001eb208780 Zea mays HOM05D007469 ORTHO05D003360 3.4e-13 80.1 250 55.6
vmacro05796 Vaccinium macrocarpon HOM05D007469 ORTHO05D003360 2.2e-12 77.4 166 71.1
PGSC0003DMG400002708 Solanum tuberosum HOM05D007469 ORTHO05D003360 1.9e-11 74.3 58 58.6
SEGI_15817 Sequoiadendron giganteum HOM05D005999 ORTHO05D003360 4.2e-11 73.2 80 46.2
Ciclev10025620m.g Citrus clementina HOM05D005999 ORTHO05D003360 3.9e-09 66.6 69 44.9
GSVIVG01005198001 Vitis vinifera HOM05D005999 ORTHO05D003360 8.8e-09 65.5 69 42.0
arahy.Tifrunner.gnm1.ann1.74V199 Arachis hypogaea HOM05D005999 ORTHO05D003360 1.5e-08 64.7 107 34.6
arahy.Tifrunner.gnm1.ann1.JK0YGC Arachis hypogaea HOM05D005999 ORTHO05D003360 1.5e-08 64.7 107 34.6
Nitab4.5_0000188g0250 Nicotiana tabacum HOM05D005999 ORTHO05D003360 1.5e-08 64.7 77 37.7
CANSAT01G1435 Cannabis sativa HOM05D005999 ORTHO05D003360 2.0e-08 64.3 73 39.7
CAN.G865.12 Capsicum annuum HOM05D005999 ORTHO05D003360 2.0e-08 64.3 69 39.1
Nitab4.5_0005409g0010 Nicotiana tabacum HOM05D005999 ORTHO05D003360 2.0e-08 64.3 77 37.7
MBI05_g32278_MAGBIO Magnolia biondii HOM05D005999 ORTHO05D003360 2.6e-08 63.9 69 37.7
Ah.04g155230 Amaranthus hybridus HOM05D007469 ORTHO05D026517 3.3e-08 63.5 41 68.3
VMungo1215G1128 Vigna mungo HOM05D005999 ORTHO05D003360 3.3e-08 63.5 108 35.2
Zm00001eb170850 Zea mays HOM05D005999 ORTHO05D003360 3.3e-08 63.5 91 35.2
Lj6A806T47 Lonicera japonica HOM05D005999 ORTHO05D003360 5.7e-08 62.8 69 39.1
Lj2g0014093 Lotus japonicus HOM05D005999 ORTHO05D003360 5.7e-08 62.8 112 33.9
CANSAT25G3254 Cannabis sativa HOM05D005999 ORTHO05D003360 9.7e-08 62.0 77 37.7
Nn6g31889 Nelumbo nucifera HOM05D005999 ORTHO05D003360 9.7e-08 62.0 69 40.6
Glyma.11G081800 Glycine max HOM05D005999 ORTHO05D003360 1.7e-07 61.2 69 37.7
Lalb_Chr05g0212151 Lupinus albus HOM05D005999 ORTHO05D003360 1.7e-07 61.2 77 36.4
Lsat_1_v5_gn_4_143840 Lactuca sativa HOM05D005999 ORTHO05D003360 2.2e-07 60.8 142 29.6
Os03g0135600 Oryza sativa ssp. japonica HOM05D005999 ORTHO05D003360 2.2e-07 60.8 83 34.9
PSO170G6629 Papaver somniferum HOM05D005999 ORTHO05D003360 2.2e-07 60.8 69 37.7
PSO210G1231 Papaver somniferum HOM05D005999 ORTHO05D003360 2.2e-07 60.8 69 37.7
Sopen02g012860 Solanum pennellii HOM05D005999 ORTHO05D003360 2.2e-07 60.8 68 38.2
PGSC0003DMG400008679 Solanum tuberosum HOM05D005999 ORTHO05D003360 2.2e-07 60.8 68 38.2
TWI73G0962 Tripterygium wilfordii HOM05D005999 ORTHO05D003360 2.2e-07 60.8 74 36.5
Zm00001eb002820 Zea mays HOM05D005999 ORTHO05D003360 2.2e-07 60.8 91 34.1
MSTRG.3620 Avicennia marina HOM05D005999 ORTHO05D003360 2.8e-07 60.5 69 34.8
Duzib147G0884 Durio zibethinus HOM05D005999 ORTHO05D003360 2.8e-07 60.5 69 37.7
Pp3c8_14440 Physcomitrium patens HOM05D005999 ORTHO05D003360 3.7e-07 60.1 76 43.4
Zm00001eb211570 Zea mays HOM05D005999 ORTHO05D003360 3.7e-07 60.1 83 36.1
Cc01_g06010 Coffea canephora HOM05D005999 ORTHO05D003360 4.8e-07 59.7 106 30.2
Duzib187G1063 Durio zibethinus HOM05D005999 ORTHO05D003360 4.8e-07 59.7 77 36.4
Gohir.D03G005000 Gossypium hirsutum HOM05D005999 ORTHO05D003360 4.8e-07 59.7 90 33.3
Gorai.003G005300 Gossypium raimondii HOM05D005999 ORTHO05D003360 4.8e-07 59.7 90 33.3
Lalb_Chr16g0377331 Lupinus albus HOM05D005999 ORTHO05D003360 4.8e-07 59.7 134 30.6
Pp3c20_7810 Physcomitrium patens HOM05D005999 ORTHO05D003360 4.8e-07 59.7 63 49.2
Solyc02g061820.4 Solanum lycopersicum HOM05D005999 ORTHO05D003360 4.8e-07 59.7 68 36.8
Thecc.01G010800 Theobroma cacao HOM05D005999 ORTHO05D003360 4.8e-07 59.7 77 36.4
vmacro18444 Vaccinium macrocarpon HOM05D005999 ORTHO05D003360 4.8e-07 59.7 77 37.7
Zm00001eb242830 Zea mays HOM05D005999 ORTHO05D003360 4.8e-07 59.7 83 36.1
Dinv08545 Davidia involucrata HOM05D005999 ORTHO05D003360 6.3e-07 59.3 79 35.4
Oeu020651.1 Olea europaea HOM05D005999 ORTHO05D003360 6.3e-07 59.3 69 36.2
Phvul.002G104000 Phaseolus vulgaris HOM05D005999 ORTHO05D003360 6.3e-07 59.3 75 38.7
Migut.L00736 Erythranthe guttata HOM05D005999 ORTHO05D003360 1.4e-06 58.2 70 37.1
Gohir.A02G174800 Gossypium hirsutum HOM05D005999 ORTHO05D003360 1.4e-06 58.2 90 32.2
Manes.01G151300 Manihot esculenta HOM05D005999 ORTHO05D003360 1.4e-06 58.2 77 36.4
HPP92_001740 Vanilla planifolia HOM05D005999 ORTHO05D003360 1.4e-06 58.2 83 32.5
Cpa.g.sc6.319 Carica papaya HOM05D005999 ORTHO05D003360 1.8e-06 57.8 69 36.2
ECA232G4368 Erigeron canadensis HOM05D005999 ORTHO05D003360 1.8e-06 57.8 177 26.0
PGR119G0821 Punica granatum HOM05D005999 ORTHO05D003360 1.8e-06 57.8 69 40.6
Actinidia28462 Actinidia chinensis HOM05D007469 ORTHO05D003360 2.4e-06 57.4 50 56.0
ATR0661G352 Amborella trichopoda HOM05D005999 ORTHO05D003360 2.4e-06 57.4 68 36.8
SalBow5G5732 Salvia bowleyana HOM05D005999 ORTHO05D003360 2.4e-06 57.4 69 31.9
COL.COLO4_22501 Corchorus olitorius HOM05D005999 ORTHO05D003360 3.1e-06 57.0 74 36.5
DCAR_011582 Daucus carota HOM05D005999 ORTHO05D003360 3.1e-06 57.0 140 29.3
Thhalv10004296m.g Eutrema salsugineum HOM05D005999 ORTHO05D003360 3.1e-06 57.0 77 35.1
Glyma.01G161900 Glycine max HOM05D005999 ORTHO05D003360 3.1e-06 57.0 65 40.0
SGA_v2.0_scaffold58G20568 Striga asiatica HOM05D005999 ORTHO05D003360 3.1e-06 57.0 69 36.2
Atru.chr3.914 Acer truncatum HOM05D005999 ORTHO05D003360 4.1e-06 56.6 139 30.9
Atru.chr3.919 Acer truncatum HOM05D005999 ORTHO05D003360 4.1e-06 56.6 139 30.9
BcaB04g20127 Brassica carinata HOM05D005999 ORTHO05D003360 4.1e-06 56.6 77 35.1
CSS0001074 Camellia sinensis var. sinensis HOM05D005999 ORTHO05D003360 4.1e-06 56.6 68 36.8
Medtr5g023090 Medicago truncatula HOM05D005999 ORTHO05D003360 4.1e-06 56.6 69 40.6
TAR628G0133 Trochodendron aralioides HOM05D005999 ORTHO05D003360 4.1e-06 56.6 77 35.1
EL10Ac6g13337 Beta vulgaris HOM05D005999 ORTHO05D003360 5.3e-06 56.2 74 35.1
Sed0006391 Sechium edule HOM05D005999 ORTHO05D003360 5.3e-06 56.2 81 35.8
Hma1.2p1_0315F.1_g122640 Hydrangea macrophylla HOM05D005999 ORTHO05D003360 7.0e-06 55.8 77 33.8
AL8G45550 Arabidopsis lyrata HOM05D005999 ORTHO05D003360 9.1e-06 55.5 74 37.8
HanXRQChr09g0257041 Helianthus annuus HOM05D005999 ORTHO05D003360 9.1e-06 55.5 172 27.3


User provided reference genes

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