Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g1262 Utricularia gibba HOM05D000509 ORTHO05D006393 1.6e-65 252.7 135 100.0
MSTRG.20833 Avicennia marina HOM05D000509 ORTHO05D006393 4.0e-24 115.2 119 59.7
SalBow6G4776 Salvia bowleyana HOM05D000509 ORTHO05D006393 4.5e-23 111.7 132 51.5
Dinv41795 Davidia involucrata HOM05D000509 ORTHO05D006393 1.3e-22 110.2 129 56.6
SGA_v2.0_scaffold95G28834 Striga asiatica HOM05D000509 ORTHO05D006393 1.6e-20 103.2 130 50.8
CSS0014656 Camellia sinensis var. sinensis HOM05D000509 ORTHO05D006393 2.5e-18 95.9 127 46.5
VMungo1383G0114 Vigna mungo HOM05D000509 ORTHO05D006393 3.3e-18 95.5 125 49.6
Glyma.18G233000 Glycine max HOM05D000509 ORTHO05D006393 7.4e-18 94.4 125 49.6
Cpa.g.sc11.3 Carica papaya HOM05D000509 ORTHO05D006393 9.6e-18 94.0 127 48.0
Phvul.008G062400 Phaseolus vulgaris HOM05D000509 ORTHO05D006393 9.6e-18 94.0 134 48.5
Nitab4.5_0000583g0080 Nicotiana tabacum HOM05D000509 ORTHO05D006393 2.8e-17 92.4 129 46.5
Potri.016G069200 Populus trichocarpa HOM05D000509 ORTHO05D006393 3.6e-17 92.0 115 48.7
ECA233G2837 Erigeron canadensis HOM05D000509 ORTHO05D006393 6.2e-17 91.3 125 43.2
Sabra02G0116600 Salix brachista HOM05D000509 ORTHO05D006393 8.1e-17 90.9 128 45.3
Phvul.008G065500 Phaseolus vulgaris HOM05D000509 ORTHO05D006393 1.8e-16 89.7 125 48.8
VMungo0540G0837 Vigna mungo HOM05D000509 ORTHO05D006393 2.4e-16 89.4 112 51.8
CSS0014005 Camellia sinensis var. sinensis HOM05D000509 ORTHO05D006393 3.1e-16 89.0 127 43.3
Rhsim07G0117300 Rhododendron simsii HOM05D000509 ORTHO05D006393 6.9e-16 87.8 132 43.9
CiPaw.01G061300 Carya illinoinensis HOM05D000509 ORTHO05D006393 1.2e-15 87.0 117 49.6
Actinidia33421 Actinidia chinensis HOM05D001542 ORTHO05D001416 1.5e-15 86.7 132 46.2
TWI14G0500 Tripterygium wilfordii HOM05D000509 ORTHO05D006393 2.0e-15 86.3 124 45.2
Eucgr.B00880 Eucalyptus grandis HOM05D000509 ORTHO05D006393 2.6e-15 85.9 110 48.2
Actinidia12704 Actinidia chinensis HOM05D000509 ORTHO05D006393 3.4e-15 85.5 131 46.6
Cfa003925 Carpinus fangiana HOM05D000509 ORTHO05D006393 4.5e-15 85.1 114 46.5
Haze_15506 Corylus avellana HOM05D000509 ORTHO05D006393 4.5e-15 85.1 116 48.3
Nitab4.5_0006762g0030 Nicotiana tabacum HOM05D000509 ORTHO05D006393 4.5e-15 85.1 137 43.8
Dinv32484 Davidia involucrata HOM05D000509 ORTHO05D006393 5.8e-15 84.7 102 53.9
Eucgr.B00993 Eucalyptus grandis HOM05D000509 ORTHO05D006393 5.8e-15 84.7 125 44.8
Cc02_g38030 Coffea canephora HOM05D000509 ORTHO05D006393 1.3e-14 83.6 110 50.9
DCAR_019105 Daucus carota HOM05D000509 ORTHO05D006393 1.3e-14 83.6 129 45.7
Medtr8g095630 Medicago truncatula HOM05D000509 ORTHO05D006393 1.3e-14 83.6 124 45.2
MD07G1137000 Malus domestica HOM05D000509 ORTHO05D006393 1.7e-14 83.2 137 43.8
CAN.G78.80 Capsicum annuum HOM05D000509 ORTHO05D006393 2.2e-14 82.8 131 45.0
GSVIVG01008341001 Vitis vinifera HOM05D000509 ORTHO05D006393 2.2e-14 82.8 134 44.0
arahy.Tifrunner.gnm1.ann1.E8SAKG Arachis hypogaea HOM05D000509 ORTHO05D006393 2.9e-14 82.4 123 42.3
Hund14886 Selenicereus undatus HOM05D000509 ORTHO05D006393 2.9e-14 82.4 124 45.2
arahy.Tifrunner.gnm1.ann1.NYL5F5 Arachis hypogaea HOM05D000509 ORTHO05D006393 3.8e-14 82.0 123 43.1
Lj1g0015308 Lotus japonicus HOM05D000509 ORTHO05D006393 4.9e-14 81.6 128 43.8
QL93p0259_0027 Quercus lobata HOM05D000509 ORTHO05D006393 6.4e-14 81.3 119 48.7
Ca_07920_v3 Cicer arietinum L. HOM05D000509 ORTHO05D006393 8.4e-14 80.9 124 43.5
Ciclev10022504m.g Citrus clementina HOM05D000509 ORTHO05D006393 8.4e-14 80.9 100 49.0
QL01p005382 Quercus lobata HOM05D000509 ORTHO05D006393 8.4e-14 80.9 114 50.9
EL10Ac4g09051 Beta vulgaris HOM05D000509 ORTHO05D006393 1.4e-13 80.1 129 46.5
PGSC0003DMG400000042 Solanum tuberosum HOM05D000509 ORTHO05D006393 1.4e-13 80.1 130 45.4
Thecc.04G199400 Theobroma cacao HOM05D000509 ORTHO05D006393 2.4e-13 79.3 124 44.4
EL10Ac8g20190 Beta vulgaris HOM05D000509 ORTHO05D006393 3.2e-13 79.0 128 44.5
CiPaw.02G030900 Carya illinoinensis HOM05D000509 ORTHO05D006393 3.2e-13 79.0 127 46.5
Gorai.005G030400 Gossypium raimondii HOM05D000509 ORTHO05D006393 3.2e-13 79.0 128 44.5
PGR042G3203 Punica granatum HOM05D000509 ORTHO05D006393 4.2e-13 78.6 132 44.7
FvH4_7g14280 Fragaria vesca HOM05D000509 ORTHO05D006393 5.5e-13 78.2 131 45.0
Migut.B01755 Erythranthe guttata HOM05D000509 ORTHO05D006393 7.1e-13 77.8 113 46.0
Gohir.A02G020500 Gossypium hirsutum HOM05D000509 ORTHO05D006393 1.2e-12 77.0 128 43.8
Gohir.A08G013720 Gossypium hirsutum HOM05D000509 ORTHO05D006393 1.2e-12 77.0 128 43.8
TWI23G0635 Tripterygium wilfordii HOM05D000509 ORTHO05D006393 2.1e-12 76.3 123 42.3
Aqoxy2G02281 Aquilegia oxysepala HOM05D000509 ORTHO05D006393 2.7e-12 75.9 122 42.6
Gohir.D02G024500 Gossypium hirsutum HOM05D000509 ORTHO05D006393 2.7e-12 75.9 128 43.0
MBI17_g24690_MAGBIO Magnolia biondii HOM05D000509 ORTHO05D006393 3.5e-12 75.5 123 41.5
Rhsim07G0117600 Rhododendron simsii HOM05D000509 ORTHO05D006393 3.5e-12 75.5 132 42.4
Nn6g33420 Nelumbo nucifera HOM05D000509 ORTHO05D006393 4.6e-12 75.1 126 44.4
Rhsim07G0118400 Rhododendron simsii HOM05D000509 ORTHO05D006393 6.0e-12 74.7 132 40.2
Prupe.2G170600 Prunus persica HOM05D000509 ORTHO05D006393 7.9e-12 74.3 130 43.8
TAR636G2420 Trochodendron aralioides HOM05D000509 ORTHO05D006393 1.3e-11 73.6 124 47.6
Psat3g108360 Pisum sativum HOM05D000509 ORTHO05D006393 2.3e-11 72.8 121 43.0
vmacro20943 Vaccinium macrocarpon HOM05D000509 ORTHO05D006393 3.0e-11 72.4 119 42.9
FAN03G2840 Fragaria x ananassa HOM05D000509 ORTHO05D006393 6.7e-11 71.2 131 43.5
AUR62004883 Chenopodium quinoa HOM05D000509 ORTHO05D006393 8.7e-11 70.9 124 42.7
Duzib151G0093 Durio zibethinus HOM05D000509 ORTHO05D006393 8.7e-11 70.9 128 43.0
Medtr7g077710 Medicago truncatula HOM05D000509 ORTHO05D006393 8.7e-11 70.9 101 45.5
CDE09G0401 Ceratophyllum demersum HOM05D000509 ORTHO05D006393 1.5e-10 70.1 132 39.4
QL08p048801 Quercus lobata HOM05D000509 ORTHO05D006393 1.5e-10 70.1 109 49.5
RcHm_v2.0_Chr1g0355271 Rosa chinensis HOM05D000509 ORTHO05D006393 1.5e-10 70.1 132 40.2
Ah.04g163760 Amaranthus hybridus HOM05D000509 ORTHO05D006393 1.9e-10 69.7 123 39.8
Manes.10G122200 Manihot esculenta HOM05D000509 ORTHO05D006393 1.9e-10 69.7 128 43.0
Manes.07G019100 Manihot esculenta HOM05D000509 ORTHO05D006393 3.3e-10 68.9 130 43.1
Sopen01g038440 Solanum pennellii HOM05D000509 ORTHO05D006393 4.3e-10 68.6 102 43.1
Solyc01g094630.3 Solanum lycopersicum HOM05D000509 ORTHO05D006393 5.6e-10 68.2 102 42.2
FAN10G1528 Fragaria x ananassa HOM05D000509 ORTHO05D006393 7.4e-10 67.8 131 42.0
FAN10G1645 Fragaria x ananassa HOM05D000509 ORTHO05D006393 7.4e-10 67.8 131 42.0
COL.COLO4_20186 Corchorus olitorius HOM05D000509 ORTHO05D006393 9.6e-10 67.4 146 37.0
Lsat_1_v5_gn_8_97941 Lactuca sativa HOM05D002211 ORTHO05D002206 1.6e-09 66.6 98 41.8
FAN06G3105 Fragaria x ananassa HOM05D000509 ORTHO05D006393 2.1e-09 66.2 111 43.2
Prupe.1G174800 Prunus persica HOM05D000509 ORTHO05D006393 2.1e-09 66.2 129 38.0
THA.LOC104798540 Tarenaya hassleriana HOM05D000509 ORTHO05D006393 2.1e-09 66.2 116 42.2
Lalb_Chr03g0038131 Lupinus albus HOM05D000509 ORTHO05D006393 2.8e-09 65.9 133 39.8
QL10p007195 Quercus lobata HOM05D000509 ORTHO05D006393 2.8e-09 65.9 78 51.3
TPR.G37720 Trifolium pratense HOM05D000509 ORTHO05D006393 3.7e-09 65.5 105 45.7
FAN06G1484 Fragaria x ananassa HOM05D000509 ORTHO05D006393 4.8e-09 65.1 154 38.3
MBI17_g24691_MAGBIO Magnolia biondii HOM05D000509 ORTHO05D006393 6.2e-09 64.7 101 40.6
Zm00001eb039300 Zea mays HOM05D000509 ORTHO05D006393 8.2e-09 64.3 131 37.4
Os08g0559700 Oryza sativa ssp. japonica HOM05D000509 ORTHO05D006393 4.0e-08 62.0 115 40.9
MD01G1060700 Malus domestica HOM05D000509 ORTHO05D006393 5.3e-08 61.6 129 37.2
Eucgr.L01454 Eucalyptus grandis HOM05D000509 ORTHO05D006393 9.0e-08 60.8 96 44.8
Ah.12g064210 Amaranthus hybridus HOM05D000509 ORTHO05D006393 1.2e-07 60.5 106 39.6
HanXRQChr09g0257651 Helianthus annuus HOM05D000509 ORTHO05D006393 1.2e-07 60.5 104 43.3
C08p36230 Brassica napus HOM05D000509 ORTHO05D006393 2.0e-07 59.7 94 38.3
BolC8t51205H Brassica oleracea HOM05D000509 ORTHO05D006393 2.0e-07 59.7 94 38.3
Glyma.09G259300 Glycine max HOM05D000509 ORTHO05D006393 2.6e-07 59.3 66 53.0
FAN01G0359 Fragaria x ananassa HOM05D000509 ORTHO05D006393 1.3e-06 57.0 131 38.2
A09p53420 Brassica napus HOM05D000509 ORTHO05D006393 2.2e-06 56.2 85 38.8
BraA09t40768Z Brassica rapa HOM05D000509 ORTHO05D006393 2.2e-06 56.2 85 38.8
HPP92_020794 Vanilla planifolia HOM05D000509 ORTHO05D006393 2.2e-06 56.2 128 35.2
Sp5g02030 Schrenkiella parvula HOM05D000509 ORTHO05D006393 2.9e-06 55.8 123 36.6
SEGI_38599 Sequoiadendron giganteum HOM05D000509 ORTHO05D006393 3.8e-06 55.5 109 37.6
PSO478G1119 Papaver somniferum HOM05D000509 ORTHO05D006393 8.4e-06 54.3 79 43.0


User provided reference genes

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